Array 1 60732-61419 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKEF01000018.1 Acinetobacter bereziniae strain TUM15022 sequence018, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 60732 28 100.0 32 ............................ CTGGTCAATGTCCTGCACCTTTTACAACAAAC 60792 28 100.0 32 ............................ TAAAAAATTATTACTCTACGCAGGTGGTGCAT 60852 28 100.0 32 ............................ AGCGGAGCGCAAAATATATTTGTAAAAAAACC 60912 28 100.0 32 ............................ ATATCCAAGTACCAACAAAACACGGTCATGGA 60972 28 100.0 32 ............................ AAGATAAAACACAGAATCAGCAACAGAGCCAA 61032 28 100.0 32 ............................ ATCTGACGCTATAGCATTCATATGCTTATATA 61092 28 100.0 32 ............................ ATGCAAGTTCAATTCAATACACGCACAATTTT 61152 28 100.0 32 ............................ GACCACAAACGTGTTTATGCCCAAGTTCTAAA 61212 28 100.0 32 ............................ AAAGTTAGAAATCTATTTGCTATGTATTGCCT 61272 28 96.4 32 ...........G................ CCCTACGCTTTCCACGTCTGCAATGGCTTTGC 61332 28 100.0 32 ............................ TCATTGATGTTAAAGAGGGTTACAGTCCAACA 61392 28 92.9 0 ..C..................C...... | ========== ====== ====== ====== ============================ ================================ ================== 12 28 99.1 32 GTTCACTACCGCATAGGTAGCTTAGAAA # Left flank : TCCAGAAACAGACTTGGAATCATACATAATTCAAAATTTTATTCTTATAAAAACAATAAGCACTATTTTTGATGAAATTTACGTTATAGCACTAGTTTTTATTGAACTTTAACATCATATAAAAATGATCTTTTTTAGCAGTTTATTGAGCTGCAAAGGAAGTATGTATTATCGTTTGCAAGATAAATTAAATTTTAAATATTTAATTGATAAATAAATTATTTTATATGAGGTATGTCGTATGATTCTGAGGAGTGAATCTATTAGAGTTTGTATTATATACTGCTATAACTTGTTGCTGATGAGGCAAAAGTGAACAATTTAGGGAAATATGCTTTTAATAGAATTACGATTGTTCAAATATTTTAACCCAATATTTTTTTACTCTTTAACAACTGAATAAAATCAATAAGTTATATTGGTAAGTAAAAACTTGGGTCATTTGATGATTTTTAGGTTTAACTTACTGTTATCACTTTATTTTTTGATCTAAAATTATA # Right flank : AAATTGTTAAACTTCTCTGATGATTTTAAAAATTTATAGTTGTCTAAATTGTTTATTTTATAGCAATAAAAAAAGCCCACTTGAATGAAGTGGGCTTTTAGAATTTGGCTCTCCAACCTGGGCTCGAACCAGGGACCTGCGGATTAACAGTCCGTCGCTCTACCGACTGAGCTATTGGAGAATCTGCATGCGATTATAAGGATATATCACGAGTGGTCAAGCCTTTGATGTCATCTTTTCTTCATTTTTGACTTGTATGCTTTTTATTTAAACAAAAAAGATCAAAATTAAAAAAATGGATTTGAGTGGTTGCAAAGCGAGAGCTGACTTGTTAGATTAAAAACATAAAGAGCGTTTAAGTTTGACTTAAACCGTGTGGATTTAACCAACTTGCCAGCACTAAAATGGCTAAATAGGAGACAGCGCGATGACGACGCTAACTATTTCTCAAATTTTTGAAAAATTTTCTTTTTATCAAGAAAACTACCTTTCTATCCTGC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTACCGCATAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched GTTCACTACCGCATAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.00,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [81.7-83.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 26304-25676 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKEF01000007.1 Acinetobacter bereziniae strain TUM15022 sequence007, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 26303 28 100.0 32 ............................ ACGTTTGTTGCTGCAAACCTTACCACTGACAA 26243 28 100.0 32 ............................ TTGGAAAATCTTTTTTAATCCTGGTGTAGGCA 26183 28 100.0 32 ............................ CCTGCATTTTCAGCTATTGCAGAAACAACGAT 26123 28 100.0 32 ............................ TGCATGTGCTACGCGGGCTTGAAGCGGTGCGT 26063 28 100.0 32 ............................ AAGACCTACGCGGTGCACTTAAAACGCCTGTG 26003 28 100.0 32 ............................ GACGAGCAATCACACGTTTACGATACTCTCCT 25943 28 100.0 32 ............................ ACTTGCAACAAGGACAACATTGTCATGATAGA 25883 28 96.4 32 ...........C................ TCTCGTCAACTTGTTCTAACACAGACTGTAAA 25823 28 96.4 32 ...........C................ ATTAAAAAATTTGTAATGGAAGTCGATGATTT 25763 28 96.4 32 ...........C................ TTAAATTCAATTATTTTATTCACTAACATTTA 25703 28 92.9 0 ...........C............A... | ========== ====== ====== ====== ============================ ================================ ================== 11 28 98.4 32 GTTCACTACCGTATAGGTAGCTTAGAAA # Left flank : ATATGTAATAAGGGTTTTAAGCGAAATCAGTAGCTTAAAGCCCTTTTTTTATGCGTATAATAATATGTGATAATATCAGCCTACTAGGTTTAAATGGTGAAATTAGCCGATCTAGCCGAATAATTTACGTCAAGATTACGTCAAGCTTTTGAGTTTAAGATAATGAAAATACCAAAACCAAGAAAACGTGGTGAAGTTTGTTTTACTAAGAAAATAACGAAATGTAAGATTTCTTTATTCTCTAATGATAAAGTAAATGAATGACATTAAAAATATGTGTGAATATTGGAAAATCTTTTACTGATAAGATAAAAGTAGTTGATTTTGAATGTGGGCTTAGTTAATCAAACAAATATTCTAAAAATTTCCCCCAATATTTTTTAGTTCTTTAATAACTTAATAAAATCAATAAGTTATAATGGTGGGTGAAAACTTGGGTCATTTGATGATTTTAAGGTTTAACTTACTGTTATTATTTTATTTTTTGTTTTAAAATTATA # Right flank : TGATTTTTGCACTACTGAGGCAGTCGCAAATCGTTCACTGCCGTATAGAGCATTATTTTGATTATATTCAGAGTTAGTCCATAAAAATGCACTGTTCAAGTGCGATATTTTAATAAATGCATCTTGATTCATTTTTTTAGATAAAAACGTTATACAAGTCACAAAATATATGTATAATCGCCGAAATTTATCACTTGACATGATTTAAAAATGGTAAAGCTCATAACTTTGACAGTCTTCGCTGGGATTTTATTTCTTGGTTATTTTACCTATGTGGATACGCAACAGAAAAAACAGCAAGAAATGCTGAATATCATTAAAGAAGCAAATTTAACCATTAAAAATGTTGAAGCGAACCCAAATAATCAGCGTATTTTAAAGGGCAATCATTCATCCATATAATCTCAAGAGTGGCTATGCTGATGTTCAAAAATTATCAGATCCGATGAAATGAACGGGGGAGGACGTTCAGTTTGATAAAATTATATAAACAGTATGAT # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTACCGTATAGGTAGCTTAGAAA # Alternate repeat : GTTCACTACCGCATAGGTAGCTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.71%AT] # Reference repeat match prediction: R [matched GTTCACTACCGTATAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.70,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-86.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 459021-456103 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKEF01000001.1 Acinetobacter bereziniae strain TUM15022 sequence001, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ====================================================================================================== ================== 459020 28 100.0 32 ............................ TTGCATAAGCAACACCATGTTTATCACCAACG 458960 28 100.0 32 ............................ ATGCATTCATTATTTTTTGAGCAAGTTCTTCA 458900 28 100.0 32 ............................ ATCTGCTGCATTTAAAATACCGTTGAGCGCAG 458840 28 100.0 32 ............................ TGAAGATCAACAAATGCTTGAACAGCAAATGA 458780 28 100.0 32 ............................ ACCAGTGTTGGTTAGCCGAAGCCAACGCAGTT 458720 28 100.0 31 ............................ GGTTATCACGCGCCTATCATCATGCGCGGTT 458661 28 100.0 32 ............................ AGCTGCGGCAGATACTCCCTCTAATGTACCAT 458601 28 100.0 32 ............................ GAACCCTACTTTGCAACATCTAAAAAGACTAA 458541 28 100.0 32 ............................ TATCACCATCTGAATATTTCACTGGAGCTTAT 458481 28 100.0 32 ............................ GTTACCCCCATCTTATTAATGGGGGTATCTAA 458421 28 100.0 32 ............................ AGCCAAACCTGTTGTTAAATCAATTGAGGTAC 458361 28 100.0 32 ............................ AGTCATAACCATGTGTAGATATGGTGCAGGGT 458301 28 100.0 32 ............................ TTAACACCAGTTTCAAAGCGTAAAAGTCCTGT 458241 28 100.0 32 ............................ GAGCAAGACAGAAACCGAAAAAAGTCCACCAT 458181 28 100.0 32 ............................ AAATCAGTAAGCCGATTAGGACAAGGATTAAA 458121 28 100.0 32 ............................ CAATTGATACAACGCAAGTTCAGAATAAAAAT 458061 28 100.0 32 ............................ ACAATGTTCATATTTTGTTATTGATGAAGCTC 458001 28 100.0 32 ............................ ATATCAGTAAAGTCTGAGGCTAATGACTCATA 457941 28 100.0 32 ............................ TGTTGGTTCTTTCTCTGGGGTTGGAGCAGCCC 457881 28 100.0 32 ............................ ATTCACAAAATGCAGGTAATTGAAATTCTTCA 457821 28 100.0 33 ............................ CCTTAAAATAAGTGGATGGTGATAAAAGAACAT 457760 28 100.0 32 ............................ TCCTTGCGATACAAGCGACTCGACATAACGTA 457700 28 100.0 32 ............................ TGCAACAGTGATTAATGCTGCAATGATGGCGG 457640 28 100.0 32 ............................ TGAATTGTCTGAGATGATGAATATCTCTGAAC 457580 28 100.0 32 ............................ TGAAATTTTCAACATGTCGTTTAGTTGATTAT 457520 28 100.0 32 ............................ AGCACGATTAAAATCCCCATAGAGTTGATGCG 457460 28 100.0 32 ............................ ACAATGAAGAATGCTTTGTCATGGCGTTTTTG 457400 28 100.0 32 ............................ ATGTATGCACCACCTACAAGACAATAACCAGC 457340 28 100.0 32 ............................ TGTATGGAAAAATTGAAACGCATCTTAAATGA 457280 28 100.0 32 ............................ AAGAATGCAAGCACGTAAACGACGAGCGCCAT 457220 28 100.0 32 ............................ TTGAATTGGTTCAAAACATTGTGCGAGAACGT 457160 28 100.0 32 ............................ AATAGCGCCAACAGGACCAGCAGCTAAAGAGC 457100 28 100.0 32 ............................ TAGTGAAATGGTCGTTAAGCGTAATAAAAATG 457040 28 100.0 32 ............................ TGCTTCTCATTAAAGAGCGCCAAATATTTGCA 456980 28 100.0 102 ............................ TTTGATGATTGATGATTGATGATTGATGATTGATGATTGATGATTGATGATTGATGATTGATGATTGATGATTGATGATTGATGATAATTCTCGCTCAACAA 456850 28 100.0 32 ............................ AAAAAGAATAAATATTTGAATGGTATCTGTAA 456790 28 100.0 32 ............................ CAAGTCTCATACAATCCAAATAAGCCATTTGA 456730 28 100.0 32 ............................ TACAAATGATGGTTGTAAAAACGGTGAAGCAT 456670 28 100.0 32 ............................ TATTTTTCTGCTGCTTACATTATTTTAGGAAT 456610 28 100.0 32 ............................ TGAACCCGGTGTAGCTGTAATTAATCTAATCA 456550 28 100.0 32 ............................ TGATACGTTTAAATTTGATTTTGCATCACTTT 456490 28 100.0 32 ............................ TGAATTTTTAAAGCAAAGAATACATCTTGATC 456430 28 100.0 32 ............................ TCAACGTGTAAGGGCTAAAAATGAATTACATG 456370 28 100.0 32 ............................ TTGGTGTGAATTACTTTCAAAATTAAGATGGG 456310 28 100.0 32 ............................ AACAGATAAGTTATAGCGAACTGGTGAAAATA 456250 28 100.0 32 ............................ TTTTGAGAACTTGCTAATAATGTCGATAAACT 456190 28 100.0 32 ............................ GGCAACATCCACTTATTGTTATTGGTGTCGCC 456130 28 85.7 0 ............C............CCT | ========== ====== ====== ====== ============================ ====================================================================================================== ================== 48 28 99.7 34 GTTCGTCATCGCATAGATGATTTAGAAA # Left flank : TCGTTGGGCGAAAACATTATATAAACAACTTGCTAAAGGCTTTGGAATCGAATTTATCCGCGATGAAGGAAAAAATTCTCACGATACTATTACAGATATAGTCAACAATTACCTAGATCATGGAAATTATATTGCCTATGGCTATGCAGCAGTTGCTTTAAATGGAATGGGGATTAGCTTTGCCCTCCCTATTTTACATGGCAAAACACGCCGAGGAGGCTTAGTTTTTGATCTCGCGGATCTAGTCAAAGATGCTATCGTGATGCCTATAGCCTTTATATGCGCAAGCAAGGGTTTAAATCAAAAAGAATTTCGAATGCAACTCATCGAGACTTGCCAAGATCAAGATATTTTAGATTATATGTTTAGCTTCATTACTGAAATATGTAGTAAAATTAAATAAAATCAACATCTTAAAAACAACTATTCTCTACGAAGTGTTTTTACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTGAACTTAACTCTA # Right flank : ATCTAGAAACAGTAAAAACATTGTAATGAAAATTAACTCATCACATCATCCAATACTTTTACCATTAAAATTCTCTTGTATTTATTTTTAAGAGTCAATTTAGACTCCACTCAAATATCAAACAAATCATAAAAAAATCCCCGCACAATGGCGGGGATTTTTTATGATCTGAGATCAGAATGACTTACATCATTCCGCCCATACCACCCATTCCGCCCATATCAGGCATAGCAGGTTTATCTTCAGGAATATCTGTGATCATACATTCAGTTGTTAACATTAAACCAGCAACAGAAGCAGCATGTTCAAGTGCAGAACGTGTTACTTTTGCAGGATCAAGGATACCCATTTCTAACATGTCGCCATATTGTGAAGTCGCAGCGTTGTAACCAAAGTTACCTTCGCCATTTTTCACAGCATTGATCACAACCGAAGGCTCATCACCTGCGTTAGAAACGATTTGACGAAGTGGTGCTTCAATCGCACGACGAAGGATATTT # Questionable array : NO Score: 6.13 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:-0.11, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.29%AT] # Reference repeat match prediction: R [matched GTTCGTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //