Array 1 68171-66943 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_QFAY01000012.1 Streptococcus panodentis strain CCUG 70867 contig_12, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
     68170	    36	 100.0	    30	....................................	TCTCGTACATCATACTCTTCAACAATCACT	
     68104	    36	 100.0	    30	....................................	TTTTCAATATCCTCACCACCATCATGGGAA	
     68038	    36	 100.0	    30	....................................	GCTGTTCCGTCCGCCTTTCAGTACGTTGTA	
     67972	    36	 100.0	    30	....................................	CAATATCAAGACGCTGCTCAAGCCCTGTCA	
     67906	    36	 100.0	    30	....................................	AAAGGTAGATGTGAGCCTTTTCTCTCAAAT	
     67840	    36	 100.0	    30	....................................	CTACAGCGCCTGTAGCACGAGCCAGACCCC	
     67774	    36	 100.0	    30	....................................	CAAAATAAAAGCAGCTAAAAACAAATGCAC	
     67708	    36	 100.0	    30	....................................	AGCTTCTTCGCGCTCACGACGTGACTCTTC	
     67642	    36	 100.0	    30	....................................	CGTCTTTCCAAGCCCCCAGGCCGCGCTGAT	
     67576	    36	 100.0	    30	....................................	TACTTTCTTTACGATAGTTGTGTTTTTCGA	
     67510	    36	 100.0	    30	....................................	TCTAATAGTATGACGGCAAAAGTGCTAGCT	
     67444	    36	 100.0	    30	....................................	ATGGAGATTTTACGTATGCCATCTTGTGAT	
     67378	    36	 100.0	    30	....................................	TGCGCTAAAAATCCCCGTGTCTGTAACACG	
     67312	    36	 100.0	    30	....................................	GATAGCTGGTCTGATAATGACGGCTACCGT	
     67246	    36	 100.0	    30	....................................	TCAACTTTACTAGCAATCTCTTTGAGATTA	
     67180	    36	 100.0	    30	....................................	TGTTGCGCTTGAGCATTTTCCAGCCAATCT	
     67114	    36	 100.0	    30	....................................	AAGGTAGCCAGATTACAAAAAGCATATTAA	
     67048	    36	 100.0	    30	....................................	AGACCTCGCCGAAAGTAAAGGCTACTGTCC	
     66982	    36	  83.3	     0	......................TT.TT..T.....A	|                             	T,TA,A [66946,66949,66954]
==========	======	======	======	====================================	==============================	==================
        19	    36	  99.1	    30	GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC	                              	       

# Left flank :   ATCAATTAAATGAGAAGCCGGAAGTGAAATCAATGATAGAGCAGTTGGTATTGACTATCACCGATTTAATCGCATCTGAGTGTTTGGAGCATGAACTGGATCTGGGATGTCATGAGGCCAGTGTATTGGACTTAATGGATGTTTGTGATGTCAAAATTGAGACGATGAGTGACACAATTTTTAACAAGTGTTTAGAAATTGTTCAAGTTTTTAAATACTTGTCAAAAAAGAAATTGCTGATTTTTATCAATACAGCAGCCTATTTATCAAAGAGTGAATTAAAGGAACTAGTTGAATACATCCAATTAAATAATGTGAATGTCTTATTTATCGAACCTAGAAAAGTTTTCGATTTCCCACAGTATATATTGGATAACGATTATTTCTTAAACAGGGAAAATATGGTATAATCATAGTAATGAATGGAACCAAACGAGCTGAAGTCTGGCTGAGACGAGCAGCGCGATTACGAAATTTCGTAAGAAAAAATATTCTACGAG
# Right flank :  GAGGCTGAGACAGACTCCCATGATGGCTGCGCCCTCACCCACAGAGGGAGCTATCTTTGGGAAGATACCGTATAAAAAGTCCTTCAGTCTCGCTTTGTTTTGGAAAAAAACTCTTGACGCGGTAGCTGATTGGACTTTTTGTTCGTCTTTTAGACTCCAAAAAGCTCCTAATCATCCTCGCGGGGCTGGGACGACGAACTAAATTTTTTCAAAATTTAGTTCTGTCCCACCGCCTTTCTTCTCTATTTCCCCAGGCAAAACTGGCTGAAGAGCTGGGTGATCAGTTCGTCGGGGGCAGCGTCGCCGGTGATTTCGCCTAGGATTTCCCAAGTGCGGGTCATGTCGACTTGGAGGAGGTCTACTGGCATGCCTAGTTCCAGTCCTTGGTTGACGGCTTGCAGGCTTTCCAGAGCTTTTTCAATCAGGGAAATGTGGCGGGCATTGGACAGATAGGTAGCGTCCTGCTCCACGATGCCGGCATTGTCAAAGAAGAGCTGGTT

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:61.11%AT]
# 	Reference repeat match prediction:         R [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [0.00,-4.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: NA [58.3-58.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,4.87   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
//