Array 1 1073-37 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJXX01000126.1 Aneurinibacillus danicus strain NBRC 102444 sequence126, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 1072 30 100.0 37 .............................. ACATCATTGATTGTCTCAATTTTGGCTGGTTGTTTTG 1005 30 100.0 36 .............................. CATCCTCCGCATTCGCTACCGGCAACGCTTCCGGAG 939 30 100.0 39 .............................. ACGGCTCTTTTTTCTGTTCTTCTCTCTTTTCTTTTTCTG 870 30 100.0 35 .............................. TTTTTGCCCAGAAAGAAGGTGAAAACATGGCAATG 805 30 100.0 36 .............................. ACGGTTCAAGAGAGACAGGTTGAAATACACCTTGTC 739 30 100.0 35 .............................. CGGATACGTTGATCGAGGACGAAGATTTATACCGA 674 30 100.0 38 .............................. TCGTCAACGTGTAAACTGGCGGGATCAGACGCCTGCAA 606 30 100.0 37 .............................. ACGAAATGATATTCGAAATTAAGCAGGATGCCGCAAG 539 30 100.0 36 .............................. CTTCTACCACAGTTCCTCTTGGCTTTTTCGAGCGAA 473 30 100.0 38 .............................. TAAACTAACGCCGAAAGGAGTCGATACTTCGTATGATG 405 30 100.0 38 .............................. ATCTGCGTTGGACTTGCGGACATACTTTGCTCGAAGCC 337 30 100.0 38 .............................. ACGCGTGATCTACGACTATATTCTCGCAGGTATATCGC 269 30 100.0 35 .............................. TCGATTTTCTTCGCATACTTGTTAATCGTCGCCAT 204 30 100.0 38 .............................. CGCTCACCGATTTTCTTTTCCATGGCCTTGCTGTTCAG 136 30 100.0 40 .............................. AATACTCCGAACGCATGCAGGCTGAAGACCGCTGCCACAG 66 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================== ================== 16 30 100.0 37 GTTTGTAGCATACCTATGAGGAATTGAAAC # Left flank : CAAAAACATATCATGGGGGAAAAAGAATATGAGCCCTATGTCTCACGCTGGTAAGGAGGCAGGGAAGCATGTTTGTTATTCTTGTTTATGACGTTGGCGTAAAGCGTGTGGGAAAAGTGTTGAAAACGGCGAGGAGGTATCTTACCTGGGTGCAGAATTCGGTTCTTGAGGGGGATATTAGCGAGACAAATTTTAAAAAGTTGAAGGCGGAGTTGCTTATGAAGATTGTTCCTGGAGAGGATTCATTGATTTTCTATACGTTTCGCACGAAAAATTATTCGAAGCGGGAAGAGTATGGGTTGAAAAAAGGAGGGGAAGATATTTTCTTGTGAATGGAAAAGGAGTGGGTGTTTTGCTGTCGTCGTCCATCGGTAATGCAAAAAGGCCGGGGGATCGACGACAGTGAAATGTAAGAACTGGTAGGGTTTTTGACGAAAAGACAGATTTTATTGATCGATGTTCAAAGAGAGGGAAGTAGTGGTTTTATGCGGGAAAAATGG # Right flank : CCACTTCAAAAAGTTGCGTGTTTGTGTATTGCTTGTT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTAGCATACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [38.3-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.77 Confidence: HIGH] # Array family : NA // Array 2 15161-10489 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJXX01000126.1 Aneurinibacillus danicus strain NBRC 102444 sequence126, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 15160 30 100.0 37 .............................. CTACATCGCGCACAAGACGCTTCAGATGACGCAGGAG 15093 30 100.0 37 .............................. ATTTCGATAATGAAGGGAAGGGCGCACGAAGCGTTAT 15026 30 100.0 36 .............................. CGCGTTGAATTCGATAATAAAATCCCGAAAGAGTGT 14960 30 100.0 36 .............................. CGGTCGAGATGATTAAAAACGTTGCGGAAGCGTACC 14894 30 100.0 39 .............................. ACGGCACAGCTAGATGATGCGTACATGGCCGGATTCAAA 14825 30 100.0 37 .............................. TCAAGCATCTTTAGGGTTTCGTCTGCATTTGGAACAT 14758 30 100.0 36 .............................. TGCCCAAACACATATAAACGTATCGGCATACGATCA 14692 30 100.0 38 .............................. ATCCCCTTCCTTTCGCAAAATCGCCGCATGACGAATTT 14624 30 100.0 38 .............................. AAAATGGAAGAGGGTGCCCTTATTGTGCAAGAGTAGGG 14556 30 100.0 37 .............................. GCGCGCGCCGTCCGCTCGTAGTGCAATTGACGTACCG 14489 30 100.0 37 .............................. CCGCCGCCTGGCCCGGGTGCGGGATTGGTGGTTTGGA 14422 30 100.0 36 .............................. TCGCGAAGTTGGAATTGATTTCGATAAGCCTGTGAG 14356 30 100.0 39 .............................. GGAGACGAACTGTTCGCTGAGATGGTATCAGACATCAAG 14287 30 100.0 38 .............................. ACCCAACGGTCATGATATTTGCCAAGCTCTGTTTTTAA 14219 30 100.0 36 .............................. TTCATCATAGCGAATGCATACGGAGCAGTCATCGGA 14153 30 100.0 36 .............................. TGAACGCGACATGGTTGCTCTGCGTGCAACAATGCA 14087 30 100.0 38 .............................. TGAATGGTTGGGTTTGGGACGACGCAAACGGAAGATGG 14019 30 100.0 37 .............................. CCTTCTAAGCTTGTTGCTCGATTCCTGGGTGATGATG 13952 30 100.0 36 .............................. GTTTTAAGAGAACAGCGTCAAATAAAGCAGATAGCC 13886 30 100.0 38 .............................. TCTACTGTCGTTGATGAAAACGGCGATCCGATTAACCT 13818 30 100.0 37 .............................. ATGAAAGAAGCATTCGACCTCTCGGGTGGCGAATTAG 13751 30 100.0 35 .............................. TCCGGTCGACGATTCTTCAACCAGAATATCTGTGC 13686 30 100.0 35 .............................. CTTGATGTATATTCTAAATATCGGGTGTGATAATA 13621 30 100.0 37 .............................. GAGTTCTTTCTAATCCAGATAGACAGGAGGTGAAAAT 13554 30 100.0 37 .............................. ACATTGCGTCCTCTCCCTAGTAGCACATATGTTCTGT 13487 30 100.0 38 .............................. AATTTCACTCCGGAACAAATCTATACTTTTGCTGGCAT 13419 30 100.0 37 .............................. TCGCCATTTACAAAAATGATGTAGCGGATAAGTTGTG 13352 30 100.0 39 .............................. CTACGGTATTGATCTTCAAGAGCTTGTTTCTGATTTCCC 13283 30 100.0 37 .............................. TAATCTTCACGTCATGGCGCATGCTTTCATCAGAGAT 13216 30 100.0 39 .............................. GAAAGAACTCTAACTCGCCAAAGTCCTAGTTCTTCCGAA 13147 30 100.0 37 .............................. AAGCAAGATGCTTTACTACACGTCCTCCGCCCATCTT 13080 30 100.0 39 .............................. TGCAAATGACCATACAGATGATTTGTTGAGAGAGTATGA 13011 30 100.0 36 .............................. CCTGCCAGGGGCAGGGAGGAATCCCCCTGCCCCCCG 12945 30 100.0 38 .............................. TCAGGGTGAATGGTCGAACAAGAGACAAGAGTTTAACA 12877 30 100.0 37 .............................. AATACTGAAGCAACACATCCTCTTGTTCGCCATCTTC 12810 30 100.0 37 .............................. CGCGTTCAGGAGCAATTGCTCCTGAACCAATCAAATT 12743 30 100.0 38 .............................. TTGATGTGGTTGGAACGCTTTCGTTGTCTATCTCCGTA 12675 30 100.0 36 .............................. TACGTTCCAAACTATCGGACGGCATCAACAGAAACA 12609 30 100.0 37 .............................. TTTTCTTCAAGTACGGTTCCAGCAGCGCAGCTCCCCC 12542 30 100.0 37 .............................. TTTTGCTATTCCTCGGCGTTGTTTCAGCAGCCATTTG 12475 30 100.0 38 .............................. CTGACGCACCACCAAAGAAACAGTCTGTTCTCTCGAAA 12407 30 100.0 38 .............................. ATTTGATAGCGAGCTGGCGCCTCTTCCTCTACGCTGGC 12339 30 100.0 38 .............................. GAGAGACTAAAGAATAAGTAAAACGACCGTACTTCATG 12271 30 100.0 37 .............................. ACGATGAATGCACAAGGTATTCTGCAAGATGTAAACG 12204 30 100.0 38 .............................. TTTTGTCTCCATTTTTGTGTTTACTTTGTCCCGTTTTT 12136 30 100.0 37 .............................. TCCATTCTGAAACTTGTCAATAGTCAGTCGCAAACCA 12069 30 100.0 38 .............................. ATTGACATGTTTGCCCAGGGTATCCGAAACAAAATTGG 12001 30 100.0 38 .............................. TTGATTCCTTGATTGGACCAGGAAAGAAAATTGAAGCA 11933 30 100.0 38 .............................. TTGTGCTAAAGAGAGATATGAATCCGCCTAAAACAACC 11865 30 100.0 38 .............................. CTGGAACGGACGGAACGGTAATTCCACTAGGAACCGAA 11797 30 100.0 37 .............................. CTTTCATCCGTCGGAATCCCGCACACCGCTTCCCATT 11730 30 100.0 37 .............................. GCTATCATCACCAGCGCTAACCCAGAAAAAGAGAAGC 11663 30 100.0 37 .............................. GCCGAAATGGTACGGATGCGAAGGTATTGCTTCAAGA 11596 30 100.0 36 .............................. GCTGCCTCAATTGCGAGTGTCATTGCGATGGCAGGT 11530 30 100.0 38 .............................. GCGGGAAGTATCAAGCAAATCATTGATTGGTTTAATCA 11462 30 100.0 36 .............................. AATACCTTTGCGGCTGGTTCAGCTTTTGGAGCTTCT 11396 30 100.0 36 .............................. TCATGATTCGTATAGGTTGCTTCCGGCATCACTGGA 11330 30 100.0 38 .............................. TCCGTGATGTCAACCAGCTTCCCTGCAATGGTTTTGAG 11262 30 100.0 38 .............................. TGATTCTCAGTGCTTCAGTATGACCGAGGAGCAGTGGG 11194 30 100.0 37 .............................. TTGAAAGAATATCTTTCTTTCAAGGTTCCTGGTAATG 11127 30 100.0 40 .............................. ATAGTCTTGGAAGGGGGTGAGGATATGAAAAATTGGTTCG 11057 30 100.0 35 .............................. TTCCTAGCGGCATTCGACGTGGTGACCGCATCACA 10992 30 100.0 39 .............................. TATCAGGAGGTGCGCAATGAAAGCAGGAAGTAAATTATA 10923 30 100.0 38 .............................. TTGGATGCGCCAGTAGAGATTGATCCAGCGATTGATCC 10855 30 100.0 38 .............................. TACGTGCCTTCCACATTCCCAACCAACACAGTCATACT 10787 30 100.0 38 .............................. TTTCTAGTTTGGGTTGTCCCTCCAAATCCAAGATTAAA 10719 30 100.0 35 .............................. ATTGTACTCCTGAAGTAAAAATCGCTATCCTAACA 10654 30 100.0 39 .............................. CCAAACACAACATGGGGAAGAGATGCAGCCGAGTCGATT 10585 30 100.0 37 .............................. ATCGATGAAGTGGGCTGGGGACGGGCAGAGAAGATGC 10518 30 80.0 0 ....TT...T.G........AG........ | ========== ====== ====== ====== ============================== ======================================== ================== 70 30 99.7 37 GTTTAGAGACTACCTATGAGGAATTGAAAC # Left flank : ATGATAAGAATAGAGAGGTTGGCCGAAGGCAATAGGAAGGAATTGTCGTCGATCGCCGGTAGTGCGAAAATGCCGGGAGATCGACGACAATTTTATTTTTGATGGATTTGCGCGAGAAATAAAGTTTAAAAGAGGAAGAGCGGGAAGACGGGATTTTTTGTTTGAAGTATAGAAGGAGTTTATCTGTAGAAGGAGAATATCATAGTATACAGATTCTATAAGGGATAAAATG # Right flank : AAGGCAAAAGGGAATTCCTGAGTACGATTTGTAAATGGTCGTGGTATATGCCAAAGAAGAAGTACTAACCTTTAAATATTGCCATTAGTCTAATTCATCTCTTCCCTATAATTTTGATAGTAAAAGTACACCAAGGACAACGATTAGGTGATAAATGGTTTTCCTGTTCCCTTTCTCAAAATTGTCGGGTATGATAAAATTAAAAAGTAGCATAATTTTAAAAAGGACGTCTGGTGTCGGTTACACCAAACGGTCATGCGATAGGCGATTTCCTCAATGGAGGATCAGCGTAATGAGGAAAGTAATCCACCACTAGCCGGCAAGCTCAAAGGTGGATTATTTTTTATGGTTGAATGACAGAATCACCACAACTAAGCTTGCAAAAGTTGCTGCAAGCATTAACGCTTCAAATACCGTCATTAGTACCACCCCTTTTCTTTCGGGGATGCGCTGACCAACCTGGAAAAATTTTATTCTATTAGATTATAGAGCCACTTAAT # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAGAGACTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA // Array 1 27787-26745 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJXX01000125.1 Aneurinibacillus danicus strain NBRC 102444 sequence125, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 27786 30 100.0 37 .............................. TGACCAAATACAAATGTCGGTTCATCCCATCCATAAG 27719 30 100.0 38 .............................. ATGTGGTCATTGGGCTACTTGCTCATGAAAGTCAGTGG 27651 30 100.0 38 .............................. TGGTTTGAAAAATAGATAAACTGGCCGCTAGTTAATGT 27583 30 100.0 37 .............................. AATTTGTTCGTAGTAAATTAGTGTTGTTTTAATCATA 27516 30 100.0 39 .............................. TGGCATACGAGTTCTCGCTCGGTGGATAAAGGTGGTGCG 27447 30 100.0 38 .............................. TCCTCTTCATATGAAAAGCCGACAAGGTGAGTCACCTG 27379 30 100.0 39 .............................. TAGCAACAAAAGGAAAGGGATGAATTACATGGCAAAGAA 27310 30 100.0 38 .............................. AATTTTGACTTATTAAAGTTCGCTCACTATATTATAAC 27242 30 100.0 36 .............................. TATATCGAATCTGCTGGACTTAGATCCGGACATCGA 27176 30 100.0 36 .............................. ATCATCGAGGAAAGGCTGGGCACTTGCCCGGCAGGC 27110 30 96.7 37 .................A............ GAAATCGAGCAGGGCAAGAGGTGGAGATTTTCGCTGG 27043 30 100.0 40 .............................. TGGTGTGCGAGTCTTGGCTCGTTGGGTGAAGGTGGTGCGG 26973 30 100.0 36 .............................. GGCTCTATGCCCTCAAGGAACTCAGACCACCAAGGA 26907 30 100.0 37 .............................. CTCTCCTGACGAACTACGTACGCGTTTTGCATCCTTT 26840 30 100.0 36 .............................. ATCTCATCCACTTCGGCTTTCGTCATGCCCGCCAGC 26774 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================== ================== 16 30 99.8 38 GTTTGTAGCATACCTATGAGGAATTGAAAC # Left flank : CTGCATCCCTACATCTTCATAGGCGGTGGTCATG # Right flank : GTAAGTGATTTCTCTCGACAGGGCTATCGAGTTCCCAGGTTTAGAGACTACCTATGATTCGCAATTTGTCCGCAAAAAAATCCTTTGCAATGGAAAAGTACAGATCATTCCTGTTCAAATCCAATACAAAGGACTTCAGTTCTTTCTGTTATCTCTTCATCAATGTTTCGCCTCGTCTTCTATTTTGAAGGCGCTCCTGTACGGGCATCGACATCAGCAACACCCCGAACAAAATCAGTAAACCGCCGGTAAAGAACGAGACGCTAAGATGCTCGCCCAGCAGCAACCAGCCCAGCAGCGCTCCGACAACCGGCTGAAAAAAGAAAAACATCGAGCCGGTTCCGGCTTCCACCATGTGCATGCCTTTGTTCCACAAATAGAACGCTCCCGCAGTCGATACGATTCCAAGATAGAGAACCGCAAACCATACAGAAGGTTGATCCAGACCGTTTACCGGAAGAAACTGCCACTCGATCACCATCACAGGCGTTGTAAAAAGA # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTAGCATACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [55.0-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.5 Confidence: HIGH] # Array family : NA // Array 1 18204-19350 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJXX01000152.1 Aneurinibacillus danicus strain NBRC 102444 sequence152, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 18204 29 100.0 38 ............................. TGATGTCGGTCGAGGTCATGATGACGCTGCCTTTCCAG 18271 29 100.0 39 ............................. ACGGATTGTATTTACCGAGGCGCAGCGGCATGCCGAATA 18339 29 100.0 36 ............................. TCGGCCATTTCCGGTGTGTTGCGTCCTTGCGTCAAC 18404 29 100.0 35 ............................. GAGAGCCGAAGCTGGAAGCGCAGATCAAAGGCTAC 18468 29 100.0 38 ............................. TCAGAAGTATATCGCAAATGCGAGCAAACTGGCTATCA 18535 29 100.0 36 ............................. CTGACTTAGATTTATTTGATAGTCCAGAATACATTA 18600 29 100.0 38 ............................. TTATATGGGGATCAGGCAGACATATAACCTGAAAGATG 18667 29 100.0 38 ............................. TCGTCACTTTTGGGATGTGATTTTTACTCCTGTCCCCT 18734 29 100.0 36 ............................. TCAACAAGAAAGAGAAGGAGACGGAAAGTGAAGTCA 18799 29 100.0 38 ............................. AGGATTTGCAACTGAATGGAAGCGCTAGTGTCTTTCGA 18866 29 100.0 37 ............................. TTTCAATCAGCTCTTTCTTTGTTTCATTGAAATTATT 18932 29 100.0 37 ............................. AGAAAATCCCAGACAATATAACCTACCATTTAACCCT 18998 29 100.0 36 ............................. AGCATCCGGCCACTCGGAAGGGACTTCCCTGTCCAA 19063 29 100.0 36 ............................. TAGCATTAAGTGGATTTGTGCTCGGATTTATCGGTG 19128 29 100.0 36 ............................. GCAAGTGGCATGGAAGGCAGCTACCTGCGAGGATGA 19193 29 100.0 35 ............................. ATGAACGTTCCTTGATTGGTACGGATGATTTCGTA 19257 29 100.0 36 ............................. TCATAAATTCGAGCAGAAACATTACAAACAAGAGTA 19322 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ======================================= ================== 18 29 100.0 37 GTTTTATCTGAACGTAGTGGGATATAAAG # Left flank : AAAGTAAACCAAAATCGGCAAAGGAACTTCCAATATCGGAGGTTCCTTTTTGTTTTATGTATTCGTTTATTTTAAATTACTTGAAGGCAGAGGTTTCTTTCGCTTTGTTCAATGCTCCCTTTATTTTTGGTTTTAATCTTTTTGATAAGATGGGCCTGGCGTAGGGACTTATGCACTCCATGTTGTGTTTAGTTATTTCTGATTGAAGAAGTATCAGTTTGGTCCGTCTGGATGGCTGTGACGTTCGTTGACATGCAGCTTTTGAAAAGGGGAAAGGAGTCTACGCTGTTTCGTTTGATTGGGGGAAAGTGGATGCTTTGCAGTGAAGCTAGTTTTTGATAAAATAAGCGCAAAGCCTTGTGTAGCAAGGTTTTTGTGCTTTTTTTGTGGAGTATGAAAAATAGAATTGTCGGTTTACTGCAAAAAGTGAATTTTTGGTTAGTTTGTTGGGACGTGAAAGGCTTGATAAATAAAGGATTTTGTCCATTTTGTTTTTAGGG # Right flank : TCAGCTTTTCTTTGAAAGCTTTTCGGGCACCCTTGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATCTGAACGTAGTGGGATATAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.50,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [65.0-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA // Array 1 1646-37 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJXX01000153.1 Aneurinibacillus danicus strain NBRC 102444 sequence153, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 1645 29 100.0 36 ............................. TATTGAATGCTTGATTTTCTGAGAGGATCGGAACTC 1580 29 100.0 39 ............................. GAACAATTTAAATCTCGAAGGCATTCACTGGGTAATCGC 1512 29 100.0 37 ............................. GCAAGAGGAAAGTGACTCAGCGCTTGCTTCAATACAT 1446 29 100.0 38 ............................. AGAGACGTACGCAAGCGGTGGCTCTTTTTCTGAGGAAG 1379 29 100.0 39 ............................. AGGAGGAGCAGGAGGAACATCCGGTGGCGCGTCTACTAT 1311 29 100.0 38 ............................. GCTTGTAAACCTTATTTTGCTATGTCATTACGGTGATC 1244 29 100.0 36 ............................. TCCTTCAACTTGCGAATTTCCTTGATGATGTCACGG 1179 29 100.0 37 ............................. CGAAGACGTGACAAAGCTGGCCGGTCTAAAAATTCAC 1113 29 100.0 37 ............................. AAGTATCGAAGCACACCATTTAAATCGTATTTAACTA 1047 29 100.0 37 ............................. AATACGAGTAGTGCTGAAATCTTTGATGAGGAAGCGT 981 29 100.0 38 ............................. AGTTGGACAAGTCTATGGACCATCTTTGCGGCAAGTGT 914 29 100.0 35 ............................. CGTGATATTGCGAAAGAGATTGGTGTTTCTTCTTC 850 29 100.0 36 ............................. GAAAATCCATGCCGGCTACTTCAAATCCATGAACAT 785 29 100.0 37 ............................. AGTTGCGCCGGATATGACGATTGAAAGAAAAACACGT 719 29 100.0 38 ............................. TCTACAGAGAACATAGCCTCGTCAACTATGACAATCTT 652 29 100.0 36 ............................. TACAGTCCGGCTAGAAAAATCTCACCACCAAGTCCA 587 29 100.0 37 ............................. TCTATCCGCTTCTTTTGGACTGAAACCGGCTTCGCGT 521 29 100.0 37 ............................. CCTTTGCGAGTAGGTTCAGGTGCTTTGCCTGTGCGAA 455 29 100.0 35 ............................. TTCTCGCCTTCTACGGTTCCGTTCCTCTCTGCTCA 391 29 100.0 37 ............................. CATCCTCACTCCCCTCATCTTCATCCAAAAGGTCTTT 325 29 100.0 35 ............................. GGTCAATGCGACTTTCAAGCCGACGATAATTAAAA 261 29 100.0 35 ............................. TGCATTTTTTTCATGTCCTGCCACATCATGAAACG 197 29 100.0 38 ............................. TCCGGGAGATATCGCTTATCTGGAGTACCCGAAACCAC 130 29 100.0 36 ............................. CTCGCGCATGAAACGCAACTCCCCGCTATTCTCCGT 65 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ======================================= ================== 25 29 100.0 37 CTTTATATCCCACTACGTTCAGATAAAAC # Left flank : AAAAGAGAACGGGATTTGTTAGAAATTAACCTTGATTATAGAAAGGAGAGCCAGGAACGGGAGAAAAAACTTCTCGAACATCTGGAAAAAACCACGCAAGCCCAAACAGAAATGTCGAGAACCATAGAAAAAGTACAGGGGATTCTTTCCGCCTTGGAGTTGAGCGTAAAAGAGGCCCGCTTGGAGATTACCTATTTGAAGAAAGGAACCGGCCATGAATAAAATCGTCGCGTTAGGGGCCGGACATGGGCTGCCTGATCCTGGCGCTTGCGGTTTTGTAAAAGAATATGAGATTGTTATGCAGATAGTTCGGAAGGTACAACCAGTATTGGAACGTCACCATGTTATCGTCGTGCTTACTCGTACAGCAGCTACCTCGTTATCTAACGCAAAAGACCTTTCTCAAAATAAAAGGGAGGATTTAGAGAATCGTGTTATGAAAGTGAATGAATCTGGAGCCGAATTCATGGTTGAATTTCATATGAATGCAGGCGGAGGTA # Right flank : CTATATATAATAATGATGTTTTCCCAAAGCATATCAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTATATCCCACTACGTTCAGATAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.50,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [46.7-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA // Array 2 17257-18460 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJXX01000153.1 Aneurinibacillus danicus strain NBRC 102444 sequence153, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 17257 29 100.0 36 ............................. TTGGCTCTCTCTTTTGTTCTCGTCTTTGTTACTGTC 17322 29 100.0 36 ............................. CGATGCGCTCGATGGACATCTGGCATTCGCCAATCT 17387 29 100.0 36 ............................. GTGATCGTGTCTTTGGCGATCACGATGATCGAGGAC 17452 29 100.0 36 ............................. TGATACGCAAGGGATTAAGCGCTTTTTTGTTTGTAC 17517 29 100.0 36 ............................. TTCTGCGCCCTTGGCCATGAACGCATTGAAGGTAGG 17582 29 100.0 35 ............................. CAGCCAAGGAGCTGCGCGAAGCCGTCAAGAGCGGC 17646 29 100.0 37 ............................. TCGGCAGCGGCAAAAAAATTCGTGGCAGACGGCATCG 17712 29 100.0 38 ............................. TATGATCGTAAGTCGGATTTTCCTGGAGCACGTTCTAA 17779 29 100.0 37 ............................. AGACATGAGTACTCTATTCGTGATTTGTTCATAGCTC 17845 29 100.0 37 ............................. GAGCACATAAAAGATCAATTTACGTCATTTGTATCTG 17911 29 100.0 36 ............................. CAAAAACGAAAGTTATTATTGCGCTACCGAGTAAAG 17976 29 100.0 36 ............................. TTGGAATATCCCTCCAACTATTCATTACGTCCATTA 18041 29 100.0 35 ............................. TGAAGCTTTTTCGTGCTTTCAAGATGCGTTTCAGC 18105 29 100.0 35 ............................. GGGGGAAATTGGCGATCACATAGCCACCTTTCCCC 18169 29 100.0 36 ............................. GGGTAGCAAGTAAGTACGATACCATGCGTATCTTCA 18234 29 100.0 36 ............................. TTTGTTCTTGGGCATAGGTTCGGGTGTCATGCTGTA 18299 29 100.0 36 ............................. CGGCACGGTAAGTCGATGACGGTCACTGAGACGTTT 18364 29 100.0 37 ............................. TTGACTTTTTCCAAGTCTTCGGCGTCTATCTTAACCC 18430 29 93.1 0 ..........................GC. | C,C [18453,18455] ========== ====== ====== ====== ============================= ====================================== ================== 19 29 99.6 36 GTTTTATATGAACGTAGTGGGATATAAAG # Left flank : TAAACCGCTAAAGGCATGGTGGTAGAAGATGTTTGTAATTGTGACATACGATGTGGGTGAGAAGCGGGTACACAAGGTATGCAAGAAGTTGAAACAATATTTGATGTGGACGCAGAATTCGGTGTTTGAAGGCGAAATTACAAAGGGAAAGTTGGTGAAGTGTCTGACGGAACTGGAGAAGATAATGGATAAGCGGGAAGACTCGATTTATGTGTATGAGGTGCAAAATCCAAATAATATCGTGAAGCGGGTGTATGGACAGGAGAAAAGTTTTGAAGAGATGTTCTTGTAGTAGGTAGGGGAAGTTTTAAGGTGATTTGCAGTGAACCTAATTTTGGATAAAGTGAGCATGAGGCCTTATATCGCAAGGATTTTGGACTTTTTTTCTATGAGGTTAAAAATAGAATTACTGGCTTACTGCAAAAAGCTGATTTTTGATTGGCTTTTTAGGTGATAAAAGTCTTGATAAACTAAGGGTTTTCGCTGTTTTGTTTTTAGGG # Right flank : TTGCATAAAAACTGAAAGAGATTTTAACTGATAATTCATACAATTATTTTTAACCAGTTGACAAAAAACGAGAAGTCTAATGAAAAGGTCGTTTCTGTCCACTTGGTAAATG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATGAACGTAGTGGGATATAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 1 25776-25337 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJXX01000171.1 Aneurinibacillus danicus strain NBRC 102444 sequence171, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 25775 30 100.0 38 .............................. TCGAGGAAACGTACGCCTATGTGAACGATATCAGCAAG 25707 30 100.0 39 .............................. TATGGGTGGCTAATTTCTACATCCCCTTCCCATAAATAC 25638 30 100.0 37 .............................. CTCGGCGGTCCCGAAGGAGCTGGGCCACACTTGGAGA 25571 30 100.0 39 .............................. ATCGACTTGAACGCTTCAGCGGCGCTTAGACGTGCCGGG 25502 30 100.0 39 .............................. GCATCGGTGTCAATGTTGCGTTGTGGTTCGTAGAGCGAT 25433 30 100.0 37 .............................. ATATTCCGGTACCATATGCCGAAAAGAAAAAGCCAAA 25366 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 7 30 100.0 38 GTTTGTAGAATACCTATAAGGAATTGAAAT # Left flank : TAGAATACCTATAAGGAATTGAAATGGAGGTCTATCATGAGGCACAATCTCAAGACATGGC # Right flank : CGCGCCTGGCTAAAGACTTCAAAATTGCAAGAGGATTGTTTGTAGATACTGATGTTAGACTAAAAAGTGGACACTGTTGGTAGACTGAATTCTGGACACGCAGAACCGAGAGTGCGACAATAAAAGCATTCTAAATCGAGGTGTCTACGATGGCAAAAAAGTACAATCAAGAATTCAAGCACCAAGCTGTTCAACTCATTCTGGAAGAGGGGAAGACGGTGGCGCAAGCTGCACGTGAGCTTGGGCTGCATGAGAATACCCTGTACCGCTGGGTAACAGAGGTTAAAAAAGATGGAGATCAAGCCTTTCCGGGTAGCGGAAACCTGAAGCCAGAAGAGAAATCCCTTCGGGATCTTCAAAAGAAAATTCGGGATCTGGAGGAAGAGAATGAGATTCTAAAAAAGGCCATGCACTACTTTGCAAAAGACCGGCGTTAGTCTATGCTTTCATTCATAAACACCGCTTCAAACTCCGTGTCGCGAAGATGTGCGCTGTCCTCA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTAGAATACCTATAAGGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [58.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : NA // Array 1 1134-361 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJXX01000218.1 Aneurinibacillus danicus strain NBRC 102444 sequence218, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 1133 30 100.0 36 .............................. CGCGGAATAACAGGCGCGTACATTATGCGACATGGA 1067 30 100.0 37 .............................. TCTACTGCTCTGTCAAAAATCATCTTTCGATTAAAGC 1000 30 100.0 38 .............................. GCGGCTGTTCGCTTGTTTTCTTTGCCGGAAGCGGAATA 932 30 100.0 38 .............................. TGTACAACACGTACTGGGCACAACAAAACATCAAGCTG 864 30 100.0 38 .............................. CCATCCCTTCATCGTGAATAAAATAGCCGGTCATCGCA 796 30 100.0 39 .............................. TCTCACTAAGTCGCTGCGGGCTTGTCCCTAACGCTTTGG 727 30 100.0 39 .............................. ATAGAGGAGGTTCCGAATGCCGCCCCTTGTGATGATAAG 658 30 100.0 35 .............................. TCGTTTGTCCACCAGACGAAAACGCTGCGCTGAAA 593 30 100.0 37 .............................. CTCTGCAGATTTATTCCCTTCAACAACTTCTTTAAAC 526 30 100.0 38 .............................. CCTTTACCCTCATCCTTGTCTTCATCTGAGGACTTAGA 458 30 100.0 38 .............................. AGGATTGGGTTCATCCGGTATCATCCTCCCTCCACCAA 390 30 96.7 0 .............................C | ========== ====== ====== ====== ============================== ======================================= ================== 12 30 99.7 38 GTTTGTAGCTTACCTATGAGGAATTGAAAT # Left flank : CACGCTGTATACGTCGGAAGGAAAGAAAGTGACACACTACTATGATCCGCAGGACCGGAAGTTCTCGGAGTTGATTCAACAGAATTTGATAAAGAAGGCACAGGCGTTCTGTCTCGGTGATTTCACCGGCCAGCCTTTCCGGATACAGCCGGTCGGCTCTTCTGCTTCGCGTCGGCAGCGAACGGTGCAGTACAAGGGAATTATTATTAAAGCCTGGCACGGTACGTTCCGTCTGAGCGGAAATCCGGAGCTGAAGAGGCTGGCCTATCAGAGCGGTGTCGGCGGGAAAAACGCGCACGGATTCGGTCTAGTGGAGGTATATTCACCTTCTGGTTCGAGGCAGTAAAAAATGGGTCTGTCGTCGATCTTCAGTGGTGTAAAAAACACCGGAGATCGACGACAGATGAAATACAGATATATCAAGAGTTTACGAGTTTTTTCTTGAAAATGGAAGCGAGGTGTGGCATGCTAGAAGTGTTGATAGGACGCTGCTTTGATGG # Right flank : CAAATATGCCTTAATCTCCTGTGCTGTCGGTGTGTAAGATTTATAGTTTACCTCACTAACGTTGCATTAAATTTTAGGAAATAATTTACATATCCTGACTATAAAAAAATCCTTTACAATTGAAGATAAAATATTTCGTCCCTGCTTTTTAACCGTCGATATGAAACTGCGTATGATACAAAATGTATGAGAACCACGTTTGCTACGGAATGTGCCTGATATTTTTTGCTTCAATTTTGCCATCCGTATATTTTTTAGGTCGCTCTAAGGATATGGACTAGGGGGAGTTTCTAAGGGGATTATGGATTGGTTATTTATGCGGCGCTCGTATTTCTATTATTGCTTTTATGTTTAATTGGGG # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTAGCTTACCTATGAGGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.91 Confidence: HIGH] # Array family : NA // Array 2 5967-8496 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJXX01000218.1 Aneurinibacillus danicus strain NBRC 102444 sequence218, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 5967 30 100.0 38 .............................. CCGGGATGGGTGCAACGTTCATTGTGTCCATCCTTATT 6035 30 100.0 36 .............................. CGAAATCCCAGACGGACCAACGCGCAAAGCAGTTGC 6101 30 100.0 38 .............................. CTCATGAGGAGTGGATGCGCTATATTGACCCACATATT 6169 30 100.0 37 .............................. TTTTCTCATGTGCGCGTAAACCTGTCACTGAATATGA 6236 30 100.0 35 .............................. TTTGGGTACAATTGACGTTCGACAATACAGGGATA 6301 30 100.0 40 .............................. CCCAACCTTCAGTGGAAAACATGGGTACGTCTGGCGCTCA 6371 30 100.0 39 .............................. GGAGACGAACTGTTCGCTGAGATGGTATCAGACATCAAG 6440 30 100.0 37 .............................. TGCGGATAAGGAGGTTTTAGGCTTGGGTGAGGAAACG 6507 30 100.0 39 .............................. TGAAATGGTCAATTGTTAACTGGTCCTCTTGAAGGTCAA 6576 30 100.0 37 .............................. GCTTTTGAATATGCTTGCTCTAATGCTCTTTGTTTAC 6643 30 100.0 38 .............................. TCATGTTTTTTTCTAGTTAATTTGGTTGAACGTTTGCT 6711 30 100.0 37 .............................. GTTGTGATACAGACATTGTATATTTTTCTCAGATACT 6778 30 100.0 38 .............................. TTTGAAGACATCGTTTAAATAGTCTCCTTCCTCTTGAA 6846 30 100.0 35 .............................. TTTTCGACAAATATCGACAATAGACTGGTAAAACC 6911 30 100.0 40 .............................. CGGTTGGCATCCATTTGCCGATACTCTTGCAGAAAAACAA 6981 30 100.0 37 .............................. AAATACTCAACTGCTTGTTCCGCCGTTTCTGCGGCAA 7048 30 100.0 36 .............................. ACCACTTGCGTATTCCGTTTAACTTCTTATTTATAG 7114 30 100.0 35 .............................. GCGTAAGCAAGTCCTGATAGCGATAGATGTCATAT 7179 30 100.0 38 .............................. GCATGAGAGTAGCGTGTGTGTGGCGTAAATCGTGGAAT 7247 30 100.0 38 .............................. CCAAATCCAACCTCAGTTGGAAGGGAGGCAGATAAATT 7315 30 100.0 37 .............................. TTGCGCTGGTTTGTAGATAATTAGTGCATCTTCGTAA 7382 30 100.0 36 .............................. TGAAAATCTTGAGTTGAAATTCAGACCATTCCAGCA 7448 30 100.0 37 .............................. CTTCCATTCTGACATAGAAAAGGAGGTCACAGAATGT 7515 30 100.0 37 .............................. TGCACCGTAACTGTGGGTTAGGTCTGTCGGATGCATG 7582 30 100.0 38 .............................. TCATCCCCTTGCTAAAAAAATAACCCTGCGTGATGCTT 7650 30 100.0 38 .............................. TCCGATTGGCCAGTACAATGAATCGAAGAAGCGCTGGA 7718 30 100.0 39 .............................. CGTTATGTATGCAGACAATCTTCTAAAACAAACGAAAGA 7787 30 100.0 38 .............................. CGATATCTTGGCATGCTCATTCTCCTTTTCCGTCATCC 7855 30 100.0 37 .............................. CGACATAGAAGAACTAGCATCTATCGGTATGGTTGGC 7922 30 100.0 37 .............................. TACGCGAGTGAAACAAAGAGTATACAAGATTTTTTTG 7989 30 100.0 39 .............................. TGATCGGACGCTGTTTGTTGACCAATTGATTACAACAAA 8058 30 100.0 39 .............................. TGCGTTGGGGACTGCGCCTGCGCCCGGAACATTCCGCTA 8127 30 100.0 37 .............................. TCAACACTAACCAATAACTTCACAATTCCATTTTGCC 8194 30 100.0 39 .............................. TCGCCGTAAACGGAGCATCTAGCGGTTCGGTATCATGGG 8263 30 100.0 37 .............................. CTCGATATCTGTAGCGCGTGTGGTGCGGCTGCTCTCG 8330 30 100.0 39 .............................. TCGCAGAGGCGAAAGCAGAGTCTTACAAAGCCCCTTATA 8399 30 100.0 38 .............................. ATCACAATGGTATGGTAAAAAGGATAAGGATGTAACAA 8467 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================== ================== 38 30 100.0 38 GTTTGTAGAATACCTATAAGGAATTGAAAT # Left flank : TGAGAAGAAGAGGCGCCGGCCGCGGTTGGCCACAAAGGTACCGGGTGCGGTCTGTTCGCTCATATCGCGCAGTTCCCGGATGGCTTTGTCTAGGGTGTGCGGCGAGATGCCGAGCAGCACGGCGAGTTTCTGGCGGTCATAGGCGCTTCCATCGAGAAAGAGCGCGCGCAGCAGCTCCTGAAATTTTTTGAAGTCTTCTTTTGTCATGGTGTTTTTCTCCCGCTTTTTTCTCTTATTATACCGCGTTTCCTAATTGTGGTAAGAGTCGATATAGTGAAGAAGAAAAAGAGGAAACGGGATGATTTTGAGAGAATTTGTATACTAGAGGGAAAATGCTTACTGTGCAGCGGAGAATGTGTCGTCGGTCATCGGTCGTGCAAAAAAGGCGGGGGATCGACGACAGGGAAAAGGCAGGAATAGCAAGGCATTGCGCTTTTTTTCTTGAAAATGGAAGCGAGGTGTGGCATGCTGGAAGTGCTGGTATGATGCTGTTTCGGTGG # Right flank : TCTCCTTTGCAAAGCCATCCCGTTCCGACCGGCCAAGTTTGTAG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTAGAATACCTATAAGGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.30] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [48.3-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0 Confidence: HIGH] # Array family : NA //