Array 1 31124-29714 **** Predicted by CRISPRDetect 2.4 *** >NZ_SLXG01000005.1 Crenobacter luteus strain DSM 27258 Ga0310525_105, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 31123 28 100.0 32 ............................ ATCGCGCGCTGCCACTTCTCGTCATGGATGTC 31063 28 100.0 32 ............................ GAATTCCGTAAACCCTCTGGCGGCGACATCAA 31003 28 100.0 32 ............................ GGCTCGGAGGGCGGCTACACGGTCGCCACCGA 30943 28 100.0 30 ............................ TTGAATCTGCCGACTACAGCTCCTCGTCGC 30883 28 100.0 32 ............................ TGCCGTCCGTGCCGGTCAACACCTTCTGGGAC 30823 28 100.0 33 ............................ TGCATGCTCTCGACCAGCCCGCCGCCGACTTGC 30762 28 100.0 32 ............................ ACCATGCGAAAAAGTGCAGCTTGTATTGCATC 30702 28 100.0 32 ............................ TCGATGGCGAGCACGTCGTCGAGGCGGTCGCC 30642 28 100.0 32 ............................ ACGCCGCCGCGATCTACAGCCGCTGGACCCGC 30582 28 100.0 32 ............................ TGCTCGAGCATGGTTTGACCAACCAGCAGATG 30522 28 100.0 32 ............................ TTGCCCAAGGCGGCGCGCGACAGCCTGTCCGA 30462 28 100.0 32 ............................ AACATGATCGGCGCCTGCGACGTGCTGTTGGC 30402 28 100.0 32 ............................ TGTTTCTGAACGCCGCCGACTTGAGCGAGGCC 30342 28 100.0 32 ............................ GTGTTCGTCGCGGCGGCGGTTGGTGAGGTTCT 30282 28 100.0 32 ............................ TCCCTGCCCTGATCGGCACCAAGACGCTCGCC 30222 28 100.0 32 ............................ AGCCGCGGCATTCCCACAGCTCGTAGTGCTTC 30162 28 100.0 32 ............................ GCGCTCGCGCGGGCGCAGCAGGCCGGCGGCAA 30102 28 100.0 32 ............................ TTGAACCAGCCGATGACCGCGCCGCCGATGCC 30042 28 100.0 32 ............................ GCGCGCATAGCGGCGATCTTCTGACGGTTGCT 29982 28 100.0 32 ............................ TGGACGACAACGCGCAGTCCAAGGGTGCCGAC 29922 28 100.0 33 ............................ ACGCATGCAGCGCGTTCAGCCAGTTGCCGTGAT 29861 28 100.0 32 ............................ TTGACCGTGACGGTATCGAAGCTGCAACGGGC 29801 28 100.0 32 ............................ TGTGGGGCGACACCGTCGCCTGGCAGCTCGGC 29741 28 89.3 0 ..........A..C......T....... | ========== ====== ====== ====== ============================ ================================= ================== 24 28 99.6 32 GTTCACTGCCGGATAGGCAGCTCAGAAA # Left flank : TTCACTGCCGGATAGGCAGCTCAGAAAGCATCGGCCGGTTGCGCGTCGGTGATGCCGTAGTTCACTGCCGGATAGGCAGCTCAGAAATGCTGCCGGAGACGGCCCGGCTGATCGCCGATGTTCACTGCCGGATAGGCAGCTCAGAAAGCTGGATATCGCGGGGGTGTGAGGCGGTCCGCGTTCACTGCCGGATAGGCAGCTCAGAAATCGAGGCGGTGGGCGATCACGCCGGCGCGGAAGTTCACTGCCGGATAGGCAGCTCAGAAATGCTGCCGGAGACGGCCCGGCTGATCGCCGATGTTCACTGCCGGATAGGCAGCTCAGAAAGCTGGATATCGCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGGTCCGCGTTCACTGCCGGATAGGCAGCTCAGAAATCGAGGCGGTGGGCGATCACGCCGGCGCGGAA # Right flank : TTGTCGGCCACTTTGTGGATAGAAGCGTGAAAAACAAAAAAGCCCTCGATTTCTCAAGGGCTTGATTGGGCTGACTGGCGGAGAGGGAGGGATTCGAACCCTCGGTACGGGGAAACCGTACGCCTGATTTCGAGTTATGCGGCAAATACAACACATTCAGTGTTTTACGGCGTTTCCCGTTCTAAAAAAACATGCCTGAACCCCCGCAAAACCCCAATAAACACAGGGTAACGGGTACTTGTTTTAGATCGCTAGCCCCGCCTTTTCTTCGGTGCGGAGAGCACCTTCTTGTTGGGGGCGACGCGGTAACCGATGCGGTCTTTGACGTAGTGCTCGGTCATCGTCCTGGTCTGGTGGCCGAGCAATCGCTGAGCGTGCCCAAGGCCTGTTACCTCCTCGACGTCGGTTGCGCTCTTGGCCCGGATGTCACGGAACTGGAAGTCGGGCACGCCGGCGGCGAGACGGGCCTTGGAGAAGCGCCAGTGCAACGAGCGGTAGCT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGGATAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGGATAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [55.0-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 32706-31297 **** Predicted by CRISPRDetect 2.4 *** >NZ_SLXG01000005.1 Crenobacter luteus strain DSM 27258 Ga0310525_105, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 32705 28 100.0 32 ............................ AATGGTGGTTTTTGCTTCATGCGCCTCAGCGA 32645 28 100.0 32 ............................ TGCAGCAGCGCGTGCCCCGGCGACACCGGCGC 32585 28 100.0 32 ............................ ACCGTCGCGAAGGCGGCCAGGCCGCCGGTCGC 32525 28 100.0 32 ............................ ACCCGGCCGGTGAAGCGACGCCGCCACGGCCC 32465 28 100.0 32 ............................ ACCTTCGGTCTGTTCTACGACGCCGGCCGCAC 32405 28 100.0 32 ............................ TGGCAGCGGGCAAGAAAATCGCGGCACATGGC 32345 28 100.0 32 ............................ GTCACCCTGCACGCGCAGGACGCGCGCCGCGA 32285 28 100.0 32 ............................ GCCTGCAGCATGTCGACGAACGGGTCGTAGTC 32225 28 100.0 32 ............................ TTGGTAAATTATTGGCCGGCGACGAGGAACTG 32165 28 100.0 32 ............................ TCAACGATGGGCTTCATCGGCGTGTATGCCTC 32105 28 100.0 32 ............................ ATTGCGATTTCCGCAATGGTTGATGCAAATCG 32045 28 100.0 32 ............................ AGGAGCAAGCGCAGCCAGCGCAAGTCGCGCAA 31985 28 100.0 32 ............................ ACCTTGGCCGCGACCGCCATCTTGGCGGACTC 31925 28 100.0 32 ............................ GGCGAGCGCGCGGTGATGCGGCAGCGTTTCGA 31865 28 100.0 32 ............................ TCTTGTAGGGATGGTGATTTCCACCATCCCTT 31805 28 100.0 33 ............................ CGCTCGCCGTCGAGTACGTGCACCGGCTGGCGC 31744 28 100.0 32 ............................ GATCGGCGGCCATGCCTGGGTCGACACCGACA 31684 28 100.0 32 ............................ TTGCCTGCCTGCCGCCGCTGATCGGGCGGCAG 31624 28 100.0 32 ............................ GCATCGGCCGGTTGCGCGTCGGTGATGCCGTA 31564 28 100.0 32 ............................ TGCTGCCGGAGACGGCCCGGCTGATCGCCGAT 31504 28 100.0 32 ............................ GCTGGATATCGCGGGGGTGTGAGGCGGTCCGC 31444 28 100.0 32 ............................ TCGAGGCGGTGGGCGATCACGCCGGCGCGGAA 31384 28 100.0 32 ............................ TGCTGCCGGAGACGGCCCGGCTGATCGCCGAT 31324 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 24 28 100.0 32 GTTCACTGCCGGATAGGCAGCTCAGAAA # Left flank : TGGCCGGCATGCGCGACCATGTCACGCTGGGCCACATCCTGCCGGTACCGGCCGCGGCCAACCTTGTCCGCGTGCAGCGCAAACAGGTCAAGAGCAATCCGGCCAAAGAGCGCCAGAGGCTGATGCGGCGCAAGGGCATCAGCGAAGCCGAGGCGCTGCGGCTGATCCCCGACGACAAGGCCAAATGGCTGGACTTGCCTTACCTGACGCTGACGAGCCAGAGCACCGGCCAACGCTTTCTGCTGTTCATCGCGCAGCAGGCAGCCACACAGGCGGCAGTCGGCGAGTTCAACGCCTACGCCCTGAGCCAGACCGCCACGCTGCCGGCGTGGTAAGCCGGCACCTTGGGCCAACCTTGAACGTTGGCTGCACCCCTTTTTTTGTTGCGGGTTTCTGTTTCTTAAAAATCAGTAGCTTAGGAGGGGGTTCGGGAAAAGGGTTTTGACGGCTAAAATGGCTGACCGCCTCGTTGCACAAGGTGGTCAGCCGGAGGACCTCTA # Right flank : GCTGGATATCGCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGGTCCGCGTTCACTGCCGGATAGGCAGCTCAGAAATCGAGGCGGTGGGCGATCACGCCGGCGCGGAAGTTCACTGCCGGATAGGCAGCTCAGAAAATCGCGCGCTGCCACTTCTCGTCATGGATGTCGTTCACTGCCGGATAGGCAGCTCAGAAAGAATTCCGTAAACCCTCTGGCGGCGACATCAAGTTCACTGCCGGATAGGCAGCTCAGAAAGGCTCGGAGGGCGGCTACACGGTCGCCACCGAGTTCACTGCCGGATAGGCAGCTCAGAAAGCTTGAATCTGCCGACTACAGCTCCTCGTCGCGTTCACTGCCGGATAGGCAGCTCAGAAATGCCGTCCGTGCCGGTCAACACCTTCTGGGACGTTCACTGCCGGATAGGCAGCTCAGAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGGATAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGGATAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [8.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //