Array 1 167339-163472 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP041280.1 Lactobacillus delbrueckii subsp. bulgaricus strain KLDS1.1011 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ====================================================================================================================================================== ================== 167338 28 100.0 33 ............................ TGATTTGGCATTCTGGACTGGCAAGGACCCAGA 167277 28 100.0 33 ............................ TGATGTTATTTCTGAATATGTGTTTTAATTTGA 167216 28 100.0 33 ............................ TATCTATTTGACGAACAACATCGATATTTTCGG 167155 28 100.0 33 ............................ TCATCAGAGCAGGCCTCTACAACTATGAGGTTG 167094 28 100.0 33 ............................ TAATAATGCTGTTGGTCAACGGGGAGTAGCCTA 167033 28 100.0 33 ............................ TGACTCCTTCTTTTTCTTCTTCGGTCAAGTCGA 166972 28 100.0 33 ............................ CATGTTTCCGTTGGAAATACAAGACTTTTTAGA 166911 28 100.0 33 ............................ TCATCGCTTTCCTAGACAAACCGCACTGCACTA 166850 28 100.0 33 ............................ CAGGGTGGTGAACTTGCGCACTTCGATCACACA 166789 28 100.0 33 ............................ TGGAAAGCGAAGCGTTCGCCGAAGAGCTAAAGG 166728 28 100.0 33 ............................ CACCTTTCCGTCGGTAGTGCAAGCCTTTGGCAA 166667 28 100.0 33 ............................ TCTTTGCTTGAAGATTATCCACACTATGATGAA 166606 28 100.0 33 ............................ CGATGAGGAGGTCCGGGACGAAATTGCGGCCGC 166545 28 100.0 33 ............................ CCCGGCCGCACGGGGCTACGGAATTATTACAGA 166484 28 100.0 33 ............................ TAAAAGACTTCACAGAACTGTATCTTCTTGCAC 166423 28 100.0 33 ............................ CCCGTCCCAAATGAATTCGCCAATTTCACGCGT 166362 28 100.0 33 ............................ CCACGGGGACGACTTCGGGGAATGGACTTCAGA 166301 28 100.0 33 ............................ CGAGTATAATTAAGAGCGTAAGGAAAAAGCCCA 166240 28 100.0 33 ............................ TTCGGGAGCTGGTAGCAGAGCGACATAAGCTTC 166179 28 100.0 33 ............................ TGATGAAGTATTGGATTTCTGCCAATTAGAAAA 166118 28 100.0 33 ............................ TTGTATTGCTAGTAATCATGTTGCCAGTAAGGG 166057 28 100.0 33 ............................ TGCTGTCAGTGTTTCGGTGGTTTACGATATAGG 165996 28 100.0 33 ............................ TCTTGTTTGTAGACAAAAAGATTGATATGGCCT 165935 28 100.0 33 ............................ CAATCTGCCCATTAACTACCTGCGCAATGGTCG 165874 28 100.0 33 ............................ TCGCCGTCTGAGAAGCCATCGCCATTCATTTCA 165813 28 100.0 33 ............................ TGACTGGCTATCCTCTCTGGTTGGTCCTAAAGG 165752 28 100.0 33 ............................ TTAACCAGCAACAGAAGGCCCAGGCGGCCGTTA 165691 28 100.0 33 ............................ TACTTAGGTAAGCCTATTGAAGGGCCTGTTAAA 165630 28 100.0 33 ............................ CTGGAAGCTGGAAGCATGATCCAGTTGGAACTG 165569 28 100.0 33 ............................ CATGCTTTAAGTTTGATAAAGGCATCGATTACT 165508 28 100.0 33 ............................ TGGGCAGATTGTTGCGGCGATTAATACGAATTC 165447 28 100.0 33 ............................ CTATGACATGCACGATTATCGCATGCTTTACTG 165386 28 100.0 33 ............................ TCAAAGCCGTACTGCGTCAAATCAATCCGATAA 165325 28 100.0 33 ............................ CCACGGCGACGACTTCGGCAACTGGACTTCGGA 165264 28 100.0 33 ............................ TCTACAAGCCTTTTTATTTAAGGAGCAGTCATG 165203 28 100.0 33 ............................ TAATGACTACTGAACAAGAATTTAAGAAAAACT 165142 28 100.0 33 ............................ TTAAGATCCCCAGCAAGTAAGATTTTTAGATAA 165081 28 100.0 33 ............................ TTTTCTTGCGCATGAGAGAGCTGACACTCCAGG 165020 28 100.0 33 ............................ TAAACGCCGGGCGCAAAATTCCCTATAGCGTCA 164959 28 100.0 33 ............................ TGAGCCAACCTACGCAAAGTCCGGACTGACTGG 164898 28 100.0 33 ............................ TTTGGTTTAATAGCAATGCTTGATTGTTTGCGG 164837 28 100.0 33 ............................ TTGCATTCTAGCAAGAAAAATATTTGCGTCGGT 164776 28 100.0 33 ............................ TAGTGAATTGGATTTTTGGCGGGTCGGTTTTGA 164715 28 100.0 33 ............................ TTCCGGACAAACTCCGGACAAATTGGGCTGAAA 164654 28 100.0 33 ............................ CCACGGCGACGACTTCGGCAACTGGACTTCGGA 164593 28 100.0 33 ............................ TCTACAAGCCTTTTTATTTAAGGAGCAGTCATG 164532 28 100.0 33 ............................ TAATGACTACTGAACAAGAATTTAAGAAAAACT 164471 28 100.0 33 ............................ TTAAGATCCCCAGCAAGTAAGATTTTTAGATAA 164410 28 100.0 33 ............................ TTTTCTTGCGCATGAGAGAGCTGACACTCCAGG 164349 28 100.0 33 ............................ TAAACGCCGGGCGCAAAATTCCCTATAGCGTCA 164288 28 100.0 33 ............................ TGAGCCAACCTACGCAAAGTCCGGACTGACTGG 164227 28 100.0 33 ............................ TTTGGTTTAATAGCAATGCTTGATTGTTTGCGG 164166 28 100.0 33 ............................ TTGCATTCTAGCAAGAAAAATATTTGCGTCGGT 164105 28 100.0 33 ............................ TAGTGAATTGGATTTTTGGCGGGTCGGTTTTGA 164044 28 100.0 33 ............................ TTCCGGACAAACTCCGGACAAATTGGGCTGAAA 163983 28 100.0 33 ............................ TTAGGCAAGATGCCCCGTAAAAATTGCCGTCAG 163922 28 100.0 33 ............................ CGGCCTTGACGGCTTCGCAACTGTTACCGTCAA 163861 28 100.0 33 ............................ TTTCTGCTATGAATCCGGTTTGACCGACTAAAA 163800 28 100.0 33 ............................ CTTACGGTAGATCAGACGATACTGACAGCCAGG 163739 28 96.4 33 ..................A......... TGTTCTTGCCCAGAATGATAAACTCCTGCCCGA 163678 28 100.0 150 ............................ TGGGGGGCGTAGTACACCCCACTGTTATAGATCTATTTTACTTAATCGGCTGTGATCTCACTGCCATTAGTGAGTAACATGGGGCGAAACAATATTCCTCACGTATGTGAGGAGAATTCTTTCTTTATGCTATTGTGTTTTTCGTACTGT 163500 28 78.6 0 ...........AT.T.C....A.....A | T [163493] ========== ====== ====== ====== ============================ ====================================================================================================================================================== ================== 62 28 99.6 35 GTATTCCCCACGCAAGTGGGGGTGATCC # Left flank : GGACTGAATACCGAAACTGATCAGATTTTGTCTATTGGCGCGGTGAAACACGATGGTACAGAATTCTACCGACTGATCAAGCAAGATATTGATGTGCCAAAACAGATAGTGGAGCTGACCGGGATCACTTCTGAAATGCTAAGTAAGGAATGCGTTCCATTGCAAGATGCATTGGAAGAACTGACTGACTTTGTTGGAAATGTACCAATTGTTGGGTACAATTTTAGATTTGATTCTGCATTTTTGAATAGGGATTATCGGAAATGCGGGATGCAAGAATTGAAAAATGAGATCAAGGATTTACTGCCAGTTGTAAAAAGAAAAGAAAAATTTCTGGACAACTATAAGCTACAGACTGTATTATCAAACTACGGGATCGAAAATAAGGTGCCGCATAACGCTGTGTCTGATGCGAGGGCTACGAAGGAGCTGGCGATGAAACTAATCAAAAATCGCATTCTGGTGATTTGAGAATGGCGTCGCTAAAGGGATCCATTACT # Right flank : TAAGTTTCAGTTAAAGCACAAGCAAATTTCAAGGATCTTTGATAGAGTAGAGGTAATAGAGAAGGAGTGAGGAACAAACATGAGCATTTACGGTAAGTACGCCGATTATCTTCCACAGATCCTGGATTCTGTTTTGCAGCAAATCCAAGGCATCGGTCAGGAGTATAGTGAAAAACACGGGCAAAAGCTATATGGGCACCTGGAAGGTCGCGTCAAAAGCGAAGAAAGCATGGCGCAAAAGTGCGAGAGAAAAGGTTTGCCGCTGACGACAGAGTCTGCATTGATCGAAAACCGGGATGCGATCGGCCTCAGAATCGTCTGCAACTTTATTGACGATATCTACACTTGCATTGACTTGTTGAAGAAGCAGGACAACTTCAAGATCATTAATGAAAAAGACTACATTACCGATGCCAAGCCAAACGGCTACCGGTCATACCACTTGATCATGGAAGTAGTCACTCCCTTTGAAGACGTCCATGGCAACAAGCCTGGCACCT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCACGCAAGTGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTATTCCCCACGCAAGTGGGGGTGATCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.70,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //