Array 1 157-1906 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFIDN010000006.1 Natronogracilivirgula saccharolytica strain Z-1702 Z1702_scaffold_6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 157 36 100.0 30 .................................... GCCCCCGAAATTCAGAAACTTAATCAAGAA 223 36 100.0 30 .................................... CTTTTCAATGGCATTATCAATTATTGCTTC 289 36 100.0 30 .................................... GCTTTGCAGTTGCGCTCCAGTGAACCTACG 355 36 100.0 30 .................................... CTACAATTTAAAACGCTGCAATCAGCGGTA 421 36 100.0 30 .................................... ACATGCTGATATCGCCATTCTCAACGCGGA 487 36 100.0 30 .................................... ACGGGGGGGGAGGATGAAATTAGGAGCCGA 553 36 100.0 30 .................................... AAAGGACAAACTAAGATTACACTTAATGGC 619 36 100.0 30 .................................... TCACCAAACAAGTGGGGTCGTTACTGTATC 685 36 100.0 30 .................................... GTCAACGGTTAGCCCATCGCCGGACTCCAA 751 36 100.0 30 .................................... AGTACATGTGGTACGTCTTCATTTTCTTCT 817 36 100.0 29 .................................... TTTGTTGTTTTCCTCTCTGATTCGTTTGT 882 36 100.0 30 .................................... CTTTCTGCCTTCTTCTTTAACTCCCTGTCA 948 36 100.0 30 .................................... TTACCCCTGTTCCCGACGGGTCTTCAAGCA 1014 36 100.0 30 .................................... TGTGATTTTATATTGGTGGTTGTGCCCGCT 1080 36 100.0 30 .................................... ATAGTCATGTAGCTCGTCAATGTCCCGCAA 1146 36 100.0 30 .................................... AACTTCTGCTTACTCAATCAAAAAGAAGAT 1212 36 100.0 29 .................................... GCCGCCAGTCAGTCACCCATAGCCAAAGA 1277 36 100.0 30 .................................... TTGGAAGGTATGGTATGAAGGCACCCCGGA 1343 36 100.0 30 .................................... TTTTATCCATCTTTCTGTAAAGGTTGCCGC 1409 36 100.0 30 .................................... TTTTATCCATCTTTCTGTAAAGGTTGCCGC 1475 36 100.0 30 .................................... ACACTTGCTTCGCTGTTGGCACTACAGGCA 1541 36 100.0 30 .................................... AAATTAGACCTTAGCGAACCAGATGTAGCC 1607 36 100.0 30 .................................... TTCTTTTTATCGTACAAATCCCAAAATTCA 1673 36 100.0 30 .................................... CGAAGGCTTTCCAATAAGTTTCCCTACTTT 1739 36 100.0 30 .................................... CCGTTTTTCATCATTCCACAGGACACCATA 1805 36 100.0 30 .................................... TTTGTGTGTTGTCTGGCGCTATCTCAGCAT 1871 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 27 36 100.0 30 GTTGTGGTTTGATTCAAAGATGGGATGACCGATATT # Left flank : GCTCGGATTTATAAGCTTGTTTATGCTTTTTTCCAGCCCAATTGTCTGCGAAAAGAAATGAAAGAAGACGTTTGCCGGATTTTTCGGTTCCAAAAATTGAAAATGAGCACTAACTCACGGAATCAGGAGTAATATAAGCACGTATATACCCAATGTG # Right flank : TAGTTGGTCTTGTAACCTTCTGATAGTCAGTCATATACTTGGATATCGGTTTAGAAAAAAATGCCGGTTTATGTCTGTCATACAGCATATTTCGGCATTTTTTTTCTAAAAAAGCTCAATTTGTGGCGGTGCATTGGCAACGGGTTGGCTCTTTTTTCCCCAGTAATTTCTGATTTTTCCATATTGTTTATCAGTTACTGATAGAATACTTACATGGCCATCAGACGGAATAAAACTCTTAACCCGTTTCATATGAACAGCCAGGCTTTCTTTACTTGCACAATGCCGGCTGTAAACAGAAAACTGCATCATGGTAAACCCGTCATCCAACAGTTTTTTCCGGAATTGTGTTGCACGGCGACGTTCTGTTTTTGTGGTAACCGGTAAATCAAAAAAGACAAATAGCCACATGACTCGATATGCGCTTAATCTTGAATGACTCATACTTCAGGATATTTCAAACCTTTTTGCTCTCCTTTCAGACATCGTACCAATGATGC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGGTTTGATTCAAAGATGGGATGACCGATATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.70,-0.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [63.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA //