Array 1 14083-13874 **** Predicted by CRISPRDetect 2.4 *** >NZ_LCTL01000033.1 Streptomyces europaeiscabiei strain NRRL B-24443 B24443_contig_33, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 14082 28 100.0 32 ............................ GCCCCGTAGACCTGCGAGAGCAAGGTAGGGCC 14022 28 96.4 33 .........................T.. GGCGACGGTCAGAGAGCCGGGAAAGCGCTCCGG 13961 28 96.4 33 ...............A............ CAGAGCGTCGACGGACGCGAACAGCTCTTCCTC 13900 27 75.0 0 ...........GTAG.......-...CA | ========== ====== ====== ====== ============================ ================================= ================== 4 28 92.0 33 GTCTTCCCCACACGCGTGGGGGTCTGTC # Left flank : TCGAACACGACGACGGCACCGTCATCGCCCGCGCGACCGTGCAAACGTCCAGCCAATGGCGACAGGCAGCCCGCACGCGCCACAGCGCGGTGGTCTACTTCGGCTACGGCTTCGAACTACACCACTCCCCCACACACCGGCGCCTCATGGCCTCACCGGCCGAACTGGGCCGTCACATCAACAGCGCCAGCGACAACGGCCTCCTCGCCGCGGGGCTCGTATCCGTCCGCCTCCAGCTCGGCCCCTCCGTTCAGCACCGGTCGCCGGCTACAGCCCGCCAGCAACCCCGCCGGTCAACCCGCGCCCAACGGAAGAAACCCCACAGGTAAGCGCAATAACCACCGTGCTACTCGCGATCCCAAATCCACCTACCGGTTCCGCAGTTCAGACTGAGCCACCAGGCACCCGCCGCCAGGCAGCGACCCTCACCAGCACGGCCAGGTCATGTAAAGTGAACAAAAAAATGCCTTGCCGATCTCCAAAACCACAGGTGAGCAAGG # Right flank : AGTGGGCGGTTCGTGAGTCTTTGAGGTGATCTGCTGTCGCCTGATGGTGTGGCGGCGGGGCGGAATCTGCCGGTCCGCGGGTGTTGATCTGGTGATGTGACCGGGTGAGTGAACGCAAGCCGTACCCGAGTGACTTATCGGACGAGCAGTGGGCTCTGATCGAGCCGGTGATCACGGCGTGGAAGGACCGGCACCGTTCGGTCAGCGGCCATCAGGGCGCCTACGACATGCGGGAGATCGTGAACGCGATCCTTTACCAGGGGCGGACCGGCTGCCAGTGGGCTTATCTCCCGCATGATCTGCCGCAGAAGAGCGCGACGTACTACTACTTCGCTGCCCGGCGGGACGACGGGACGGACCAGGTCATCCATGAACTCCCGCGCTGCCAGGTCCGCGAACGCGCCCGGCGATGAGAGGACCCGACCCTGGTGGTGCTGGACACCCAGAGTGTCCATGTGGCCGCCGGGGTTCCCGCCTCCACGAGCGGCCATGATCCGGCC # Questionable array : NO Score: 5.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.60, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACACGCGTGGGGGTCTGTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-10.80,-11.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA // Array 2 18378-18045 **** Predicted by CRISPRDetect 2.4 *** >NZ_LCTL01000033.1 Streptomyces europaeiscabiei strain NRRL B-24443 B24443_contig_33, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== =================================== ================== 18377 27 100.0 34 ........................... ACGTCCAACAGGCGGCAACGGCGGAAGGCGTCGC 18316 27 100.0 34 ........................... GGCTTGAGGGTTCTCGCCCGAGGCGAGGTAGAGT 18255 27 100.0 34 ........................... CCGGCAACCACGATGCCGACGGTGATGACGGTGT 18194 27 96.3 34 .......A................... TGCTACCTCGGCGTGCCGCGGCCCGACGCCAAAT 18133 27 85.2 35 .......A.G....C...........T CGGGGGCGTCGTGACCGGACGCCCTCCGCGAGGGC 18071 27 88.9 0 ...T.............T...A..... | ========== ====== ====== ====== =========================== =================================== ================== 6 27 95.1 34 CTTCCCCGCACGCGTGGGGGTCTGTCC # Left flank : CGTCCACGCAGGCCCGCGACCAGTCGAGTTGGCCGGCCGCGTTCAGCTCCGCGAGCAGGATGCGGTGCAGCTGGTCGAAGACTCCTGCCCGCTGCCACCGCTCCAGGCGGCGCCAGCAGGTCTGTCCCGAGCCGAACCCCAGCTCCAGCGGCAGGAGTTGCCAGGCTATGTCGTTGTAGAGGACGTAGAGGATGCCCTGGAGACAGAGCCGATCCGCCACCGGCCGCGGGCCTGGTGACCGCTCCGGCCAGGGCGGCAACAACGGTTCGATCAGCGCCCACAAGTCGTCGTCCACGATCCACGGCCGAGTACTCACAGCATCACAAACGGCCGAATCAACAGACCGGTCACGCCCAACCAGCGCACCTCAACAAGATCGTGTTACGAGCTCATAGGGATCCGCACAACGCAGCTCCCTGGCAGCCCGTCTCCAGCCGACACCCGTGTAAAGTCAGGGAAAGACGACGTGTCGATCTTCAAAGCCCCATTTCGGTAAGGGT # Right flank : TTTCGCAGATCCTGCTGTGTGGACACCCGTTGTCAGACCACCGTGCCTAGTCTTACGGCGACAAGTCGGCTTCGGCGCAGGGGGTTTGCGTGGCGTTCGACGGTGGGCGGGTTGCTGCTCGCGGATTCCAGTACCAGTATTTGCGCACGGTGGAAGCGTTGCTGGCCAGTGTACGGAACGGCGAAGCAGCTGTGTGCCGTATCGAGGGGCCTGGGAACGCGGTGTCGCTGCGGCATGCGGATTCGGTCGATTTCGATCTGGCCGACGCGGCTGGCCGCTCGCTGATGGCGGTCCAGGTGAAGAGCGCCGGAGCGGGCCGGACTGTGCGGGCACGTGAGGCGGTGGCGGTGCTGGCGCATCTGGTCACCGGGATCGACGCCGAGCGATACCAGCTGATCACCTCGGCCGTGCCGGATGAGGGATGTCTGCGGCTGGCCGAGCTGTTGCGCCGTAACCGCGGTGACGTGCCACGGATCAAGGCCGGGCTGAAGGACCTTCTG # Questionable array : NO Score: 3.01 # Score Detail : 1:0, 2:0, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCCCCGCACGCGTGGGGGTCTGTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,1] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.10,-4.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA //