Array 1 1467402-1470248 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP014544.1 Zhongshania aliphaticivorans strain SM-2 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1467402 28 100.0 32 ............................ ATATTTAAATTTCTCAGTTGCACCAGACACTG 1467462 28 100.0 32 ............................ TTCATCCCCTCCAAAGCCCAAGCCTCTAAGCA 1467522 28 100.0 31 ............................ ATCTCTTTGCACAATGCTGGCACCAGATCAG 1467582 28 100.0 32 ............................ AGTACCTAAGCGCCCAGGATAGGCACCTAGTC 1467642 28 100.0 32 ............................ ACCGGACGCAACAGCTTACCCGTTTAGAATGC 1467702 28 100.0 32 ............................ TATAAGTGCGCGCTTTGTTGCTGTGCTTGTTG 1467762 28 100.0 32 ............................ ACCTCGCACCGAATCGAGATGACCTTACCATC 1467822 28 100.0 31 ............................ GAGAACAACAACAACGCTGCCGACCCGCAAG 1467882 28 100.0 32 ............................ TAGTCGAAGCAGTACGGCTACTCGGTACGCTA 1467942 28 100.0 32 ............................ AAGTGCGACCTCGCCGCATTGCGCCCAAGCCC 1468002 28 100.0 32 ............................ ACGCGCAAAGCAGCCAGCATCTTGCGAAAGCC 1468062 28 100.0 32 ............................ ACCCTTGCCAAGGAAGTGACCACGGCGGCTAC 1468122 28 100.0 32 ............................ AGCTGCCACCAATACACCAGCCGCTATTTTAA 1468182 28 100.0 32 ............................ ATAAAACGCTGGTGCATCCGAATAAAGAAAAG 1468242 28 100.0 32 ............................ TTAACGCCAGGCAGAGTTTTTACATTCTCCTT 1468302 28 100.0 32 ............................ ATTGGCAAGCGACAAGCGGAAACGCTGGTAAG 1468362 28 100.0 32 ............................ TACGCGTCAAGTGGGAAGGCATTTATTTTGGA 1468422 28 100.0 32 ............................ CTCGGCAGATCCGGTAGCAGTTATAAGGCCAG 1468482 28 100.0 32 ............................ TATACGAACTCGCCCGCGACGAAGACGGCTAT 1468542 28 100.0 32 ............................ AAAGCCTGCAAGCCTATCACCTCCGCCCGATA 1468602 28 100.0 32 ............................ AAAGATATAACCGGCACCCTCGAAGACAAGCC 1468662 28 100.0 32 ............................ TTTTACTCGGTGTGATTGACTCACCACCATGC 1468722 28 100.0 32 ............................ ACACGGTAGGCGCTACTGCCGACACGCTAGCA 1468782 28 100.0 32 ............................ TGCAAAGTCTTGTGTGCCTGATCGTTTTGGCG 1468842 28 100.0 31 ............................ GGTAAACAATACCGAGCGCCGAAACTACCAG 1468902 28 100.0 32 ............................ TGCGCTAATTGCTGCGGGGCAAGAATTAGCGT 1468962 28 100.0 32 ............................ GTTAGCGCTGGCCACGGCCTCAGTAATTCCCC 1469022 28 100.0 32 ............................ TTTATATCGCCGTTGTTGAAACCGTCGAATAT 1469082 28 100.0 32 ............................ ATTTGCGCAATATTCCACGGCGACACCAAGGA 1469142 28 100.0 32 ............................ AGTTTCAAAACATTGGACGCGCCCACCATAAT 1469202 28 100.0 32 ............................ GCTGCGAGCATTACCGGATGCGTGCGTGCGCA 1469262 28 100.0 32 ............................ AAGCACTACACCAACATGAACGACACACTGTT 1469322 28 100.0 32 ............................ TTTGAATCGACGGTGAACGTATACGTCGATAA 1469382 28 100.0 31 ............................ GAATGCTTGATACTGAGATTTATAATCTTAG 1469442 28 100.0 32 ............................ AAAGACAAGGACTTCATAACATGACAGAAAAT 1469502 28 100.0 32 ............................ ATTAGCTGCTGGATCTCGCCAGTGGTGTAGCC 1469562 28 100.0 32 ............................ GCTTGCATCATGCGGTTGCGCTCAGCTTCATA 1469622 28 100.0 32 ............................ AAGAAAAGGGCATTGCTGAGATTATTACCACT 1469682 28 100.0 32 ............................ ATATTGCGCGCCCCACGAAACACCCTCGTTCA 1469742 28 100.0 32 ............................ AAATCAAGCAGGCCGAACAATACGGCGTTGAC 1469802 28 100.0 31 ............................ GAATGCCTCAGCCTGCGCATAAAAGACATAG 1469862 28 100.0 32 ............................ ACCCCCTCAACTTTCAATAAGCCTTGCTCAAT 1469922 28 100.0 31 ............................ ATTGAAGTGCAGTATTTGGATGGCAACCAAG 1469982 28 100.0 32 ............................ GTGTGCTTGGGATTAAGAATAACCCACGAACC 1470042 28 100.0 32 ............................ AGTTTATCGTATAAATCGTGGGATAAATTTAA 1470102 28 100.0 32 ............................ AATAACAGAGCCAACCAGCCCACCAATGGAGG 1470162 28 100.0 32 ............................ ATTGATTCAGAGGGCCGTGGGCCGCTCCACAT 1470222 27 92.9 0 .....................-..A... | ========== ====== ====== ====== ============================ ================================ ================== 48 28 99.9 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : GAAGACCCAAAATGCTTGGCAATCTGAAGTTGAAATTGCAAGAGTTCGCTTGAAGGGGGTTACTAAATGGTAGGAATCACCATGATTTAGGCATTCAGTAGTTTTGAGATGCTATTTAAAATAATCCAGTAAAATCGGCGAGCCTGCACTAGCGCTCGCAACTGATGATGGAAGTCCCCGAGGTTGTTCGGCGATCAGGAATTGCCAAAGCCGCGGTAGCGCTAGGCACTACGCAATCCAGATTGAATGATGCATTAAAGGGGGAAATAGAAAAGTGCAGTGTAGACCGCCTAGCGCAGATGCTAGCGGCAGTTTGCTACACCGTTAAGCTAAATATTTGTTACGCAACCTGAAAAATATGCAAATCTGACCATTAAATTCTCGCTCTTTAAAAATTATTTAAAATCAATTGGTTACAATGATAGCTGGAATCATTGGGTAATTCGATGGTTTAAGGCTAAGTTATTGTTGTAGCTATTTTTTTGCGCTTTATACTGGTG # Right flank : ATCAACTGACCTGCCGTGCGATGATTGTGAAGACAACGGAAGGGCTACTTGCTTCTGGGGGCATTTTACTCGGTGGTTTATACGGACGACTACTTAGCCATCTCAGCCCTTCAGCATTACGCCTTCTGCCCACGGCAGTTTACTTTAATTCATGTAGAGTAAGCATGGGCAGAAGATTACTTTACGGCCGAAGGCAATGTGCTGCACGGTAGGTCGATTTTGGGCTCGCAGTACAGCATCGAGGTGCGCGCTAGAAGCGTGAGGTGACGATCGAGTCGAGGGCTTTCGCATTCAGGCGGGTATGCATTTTCTTTAAGTTATTTAACAGCTTAGACTACAATAGTAGCACCCATACAGGCGCTACTATTATGAAATGTTCGGGAGAAGGTCAACAGATCGCTAAAAGAGTCCGCACGATTGCCTAACGAACTTTAGCAAAGCAGCTTCGCACTTCATTTATAAAAATTTCTGGTTGTTCGAAAGCGGCAAAGTGACCGCCT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //