Array 1 1790-3404 **** Predicted by CRISPRDetect 2.4 *** >NZ_VETE01000161.1 Escherichia coli strain KCJK8779 NODE_161_length_10263_cov_2.347474, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1790 29 100.0 32 ............................. GCATTGACGCTTTAAACGACGACGGACGCCAC 1851 29 100.0 32 ............................. TAAACGCACCTGGCGCGCCACTTTATCAACAA 1912 29 100.0 32 ............................. CGGCTTGTTTAATTGCGTGGAACGTCTCAATT 1973 29 96.6 32 ........T.................... ACGGCGTGGATTGAGGGACGGGTATTTGGTCC 2034 29 96.6 32 ............................T AGATCGCGCCACGAGGAAACGAATATGAACGG 2095 29 100.0 32 ............................. TGCCGCCAGGCCAGCGACACATCAGACAACTG 2156 29 100.0 32 ............................. GTCTGTGATGGCCTGCTCGTGAGTCCGCGGCG 2217 29 100.0 32 ............................. TTTTGATTTCATTAACGGCGCTCCCCATATTT 2278 29 100.0 32 ............................. TGCGCCGTAGCGTGTCCACCTATTGTAGTAAA 2339 29 100.0 32 ............................. ATACAAACGCGGTGTTTATCAATATGAATTTT 2400 29 100.0 32 ............................. GCACCACGCGTACCCCGATGTTTGTTTTGCCA 2461 29 100.0 32 ............................. ATCCGGCTATATCTTTGAGCATTACAGAAATA 2522 29 100.0 32 ............................. CTATTGCTTTCGTACAGATTTTCAGTGGTGCT 2583 29 100.0 32 ............................. AAAATTCTGTGTTTCGACCATTACTTCGGTAA 2644 29 100.0 32 ............................. ATTCTTGATCACGCTTTTACCGAAGTAATGGT 2705 29 100.0 32 ............................. GGGGTAGAATTATTCTTCGTGAGCGATTTATC 2766 29 100.0 32 ............................. CGGCGTTCCGTGCGGCAATTGGAATCACACCA 2827 29 100.0 32 ............................. CGTTCTGAATCCGATATTCTTCAGCACCTTCA 2888 29 100.0 32 ............................. AGCGTCAATCAGCGCGTCTATCGCGTCACTTT 2949 29 100.0 32 ............................. ATTTGGGGGTATGAGAGCGCCGAGCCGTTCGG 3010 29 100.0 32 ............................. GCTCCCTGTCAGTTGTAATCGATAACGTTGAT 3071 29 100.0 32 ............................. ATGTAGGGGCAATCGAACGATTCTCTGCCGAC 3132 29 100.0 32 ............................. CCTAGCCCGATTATCGGCATGAGCGATGCGGA 3193 29 100.0 32 ............................. TCGAAGAAGAAAGGGAAATAATGCGAGGAACG 3254 29 100.0 32 ............................. TATTACGCGCCAGCAATGCTGACAGCGGCAAA 3315 29 100.0 32 ............................. CGCGAGAGCCAGCAAAACGCCAGGGCACAAAA 3376 29 93.1 0 .A..........................A | ========== ====== ====== ====== ============================= ================================ ================== 27 29 99.5 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGGATGAACTATTGGCAACGCTGACCGATGATAAACCGCGAGTCATTGCACTGCAGCCGATTAGCCAAAAGGATGATGCCACACGTTTGTGCATTGAAACCTGCATTGCGCGTAATTGGCGTTTGTCGATGCAAACACATAAATATCTAAATATTGCCTGATTAAACATTTATAAGCGTTATAAATGGGTGGAACCTGTAAAGACTTCTACTCATTTATATTGTTTGTCGCCTCTGAAAACTCCTCCATTTTACCCATCCAGGGCTAATCATTAGCATTCTCTACAAATTCTGTGGCATTAATTTTTCGCTGGAGTGAAAATTATTGCGGTAAAGTTTGGTAGATTTTAGTTTGTATAGAGTTATTTTAAATATTTACCTTTTTAATCAATGGATTAAGTACTCTTTAACATAATGGATGTGTTGTTTGTGTGATACTATAAAGTTGGTAGATTGTGACTGGCTTAAAAAATCATTAATTAATAATAGGTTATGTTTAGA # Right flank : ACCATATAACCCGTTATCTCTTTCTCAAGTTTTTATATTAGCAGTACTTGTAATAAGCAACATATCCACGTAACCCCTCATGTTCAAAATAGTTCTCCATGCCAGAGAAGTTCACAATTATCGATACAAAAAATTAAATTTAATCAAAGTGTTATTTGTATGATTCTTAAATCGTTAAGAAATTTTAATCTATTATTTTTTTAATGTTGAATTAATATCTATTAATTTTTTCTTTAGGTTAATAGTTTGTTTTTTAAGCTTGTTATTCATTGATTAAGTAATAAATCTGAAAATTTGTCTTTGTTTTGAGGCTAATGAGTGGTTTTACATTACCGTTTCTATACGCTGTTGATGAATAGTTCTTATGAATAAAGATATCCAGTTCATACTTTAAGTGAAAATTGATAAAGTGCGATTCGTATTGTCTTTTATTCTAAAGACATCGAGTGTAGTTAATATTCCTTGTAAAAACAGGGATAAACCGAACTAGTTAAAGTTTT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //