Array 1 22-2454 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABVBW010000284.1 Acinetobacter bereziniae strain KCJ3K37 NODE_284_length_2809_cov_18.988489, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 22 28 100.0 32 ............................ ATTAACAATTATCGATACTGATGAAAATAAAA 82 28 100.0 32 ............................ GGTTTCGCCCTGGCTAAACAATAATGATATAA 142 28 100.0 32 ............................ GCTAGGGCATCCAGTGGGAGGCTTATCGCAAT 202 28 100.0 32 ............................ ATGTATTCATAACTACCTCAAGTCGCATCTAA 262 28 100.0 32 ............................ AACACCAATTTTGTTGCGAAAGCGTTGAAACC 322 28 100.0 32 ............................ TGTTAAGCGAGGATAATCTACGACCTGAATTT 382 28 100.0 32 ............................ ACAGTTTCAAAAGCGCACTGAATGAATTCTTG 442 28 100.0 32 ............................ ACCAACCGACGGTTGTAAAAACGGTGAAGCAT 502 28 100.0 32 ............................ TATTAATCAATTGCTTATTAAGTTCAATGCAT 562 28 100.0 32 ............................ TAAGTTTTGACTTTTTTTAATGCGTAATATGA 622 28 100.0 32 ............................ AAAGACATTGTAATCTACAAGTCGGAACGTTT 682 28 100.0 32 ............................ TGTAGGGGTTAAGACTTCGATTTTATCTTGAT 742 28 100.0 32 ............................ CAAATGATTATGTGTTTACAGTAAAAGCTGAA 802 28 100.0 33 ............................ ATTTCGATCAGTTACAGGTTCACTCTGCATACA 863 28 100.0 32 ............................ TATCCATTGGCACTATATCAACGTAATCTATA 923 28 100.0 32 ............................ TGACACATATGACCCCGAATTGCCAAGTTTAG 983 28 100.0 32 ............................ AGCAACAGGATCAATGATAACCGCATTAGCAC 1043 28 100.0 32 ............................ TAGTGGTGTTGGTATTTCTTACAGAGAAGTAG 1103 28 100.0 32 ............................ ATATAGCCGAATGCTGTAATACCAAACTTGGC 1163 28 100.0 32 ............................ TGTTTCTAAAATTTGTAATGATTCACAAATGA 1223 28 100.0 32 ............................ TTAAACAATGGAAAAACCATTTATCACCTCAT 1283 28 100.0 32 ............................ GTGAGTGTCGTTAATTCGGTCTACAATCTCAT 1343 28 100.0 32 ............................ AAACACTCCTTATCCTGATAATGTAACTCCAC 1403 28 100.0 32 ............................ ATCCTGCACCTTCTACAATTCCATAGATAACT 1463 28 100.0 32 ............................ GATCTCGTTTGATTTTGTGGTTTCTTTCATAA 1523 28 100.0 32 ............................ TTTCAGACGATGTTCTCTTGAACCTGATTTCA 1583 28 100.0 32 ............................ ACAGCACCAGTTTGCAACATCATTAACTGCCA 1643 28 100.0 32 ............................ TTGTGAACAGATCTAATATTGTAGTAGCTGCG 1703 28 100.0 33 ............................ AACCACGCCGTTTTCATTGAAATCGCCATAGCT 1764 28 100.0 32 ............................ ATATCTGCTGTGCTAACTGTGCTTTCTCGTTG 1824 28 100.0 32 ............................ AATATAATATCCTGTCGTGAAATTGACATGAT 1884 28 100.0 32 ............................ TTGTGAACAGATCTAATATTGTAGTAGCTGCG 1944 28 100.0 33 ............................ AACCACGCCGTTTTCATTGAAATCGCCATAGCT 2005 28 100.0 32 ............................ CAGCGATGCCAATGCTCTACAAATCGGATTAA CA [2008] 2067 28 100.0 33 ............................ CGATGCTAGGTGTGGATTGGGGGGTTTAGTACA 2128 28 100.0 32 ............................ GCTAATTTGCATAAGGTTTTATTTATCACTGA 2188 28 100.0 32 ............................ GAAGGGGCTAACTTTTTAAGCTGCATTAGCAC 2248 28 100.0 32 ............................ AGACTCTAAATCATGCGGTTGAACAGGCTTTG 2308 28 100.0 32 ............................ ATTGTGGTAAAAATTAACTTAAATTTGATTTT 2368 28 92.9 32 ...........C......T......... ATGTCAACACATGTATTACTGGAAGTCTAAGA 2428 27 78.6 0 ...............A..C.-..T.T.T | ========== ====== ====== ====== ============================ ================================= ================== 41 28 99.3 32 GTTCACTACCGTATAGGTAGCTTAGAAA # Left flank : ATTTTTTGTTTTAAAATTATAG # Right flank : GTGCTAAATAGAATGTTTATTTTTACTTGATTATTTAGATAATATTTATAAAAGTCGTTAATCGATTTTTATTCCGAAACCCCTTAGAAAACGGTTTTGTTTAACAGGATGATCAGCTTTTTTTATTTATCTCAATTTCAATAAATGGGTTAGGCAAGATCTTTTATATTCAAAGTTGATAATAGATAGGTAATTTCCTTATTGCCCCAGAAAAAACTAAATGAATAAATCTCATCTTTTTATTGAATAGGCGTGTTTATAGGACTGAAAAATTACTTGATTATTAACTTAAAAATAAAATGGTTACGTAACTTTTTTATAATTTCGCAGCAATTAATAAACGCAGTATCTAAAT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTACCGTATAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.71%AT] # Reference repeat match prediction: F [matched GTTCACTACCGTATAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.00,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 14800-17650 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABVBW010000022.1 Acinetobacter bereziniae strain KCJ3K37 NODE_22_length_37830_cov_16.630719, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 14800 28 100.0 32 ............................ TTTAAACTCAACCTCAGCACGACACCAAGGAC 14860 28 100.0 32 ............................ ACAAAAGCAGTATTCACAACAACCAGTTCAAA 14920 28 100.0 32 ............................ AAACCGTATGACACGCAAATTAGCGCAAATTA 14980 28 100.0 32 ............................ GTTTAGCCACTTTTGACAATCAGACTGCTTGA 15040 28 100.0 32 ............................ GACATAGAGCCTTTGATATATATGGAATTACA 15100 28 100.0 32 ............................ TTTTACTTTAATATTTCCAGTGATTCTTTTTT 15160 28 100.0 32 ............................ TCTAATCATGAAACTTGGTGCGAAATTGCCAT 15220 28 100.0 32 ............................ TGATTACTAAAAAAAGGAGCCTGGATAAGGCT 15280 28 100.0 32 ............................ TACTGGATGCCCTAGCGGTTATACAAGTGGTT 15340 28 100.0 32 ............................ TAACTTTACCCCTAATGTTGTCAATGCTCGTA 15400 28 100.0 32 ............................ TTAATGTGCCCGGCTGGACAAACTGGAACGTA 15460 28 100.0 32 ............................ AAGTTTTTTCGTGAAGTTCTTGTTGTTCAATT 15520 28 100.0 32 ............................ GGCTTCGCCCTGGCTAAACAATAATGATATAA 15580 28 100.0 32 ............................ GTCGCCATTTGTATCAACGTTTGGTTTGGGTT 15640 28 100.0 32 ............................ AGCTTCAAGCACCATGTACTTTCCTGCATTTT 15700 28 100.0 32 ............................ AGTTGAAGCAAAATTATGTTGATCGAGTTTCA 15760 28 100.0 32 ............................ TGCTGATGCGCTTGCATTTATCAAGCTATATA 15820 28 100.0 32 ............................ TAAACGTCTTGAATTTACACATGCATCCGTAA 15880 28 100.0 32 ............................ TTTAGACGTTCTTTTATCACCATCGACATATT 15940 28 100.0 32 ............................ AGAATCTGGAAGTATTTTAGGGAATTTTGGAA 16000 28 100.0 32 ............................ ATCAGCAATTTGCAGACAGCAGTAATATTGTT 16060 28 100.0 32 ............................ TTGTTATTTACAATTTTGTACTCTTCTGGAAC 16120 28 100.0 32 ............................ TAACAAGCCTTATGATCAGGAAGATATTCAGA 16180 28 100.0 32 ............................ AAGGCGCTTAAAGAGCAAAGACAATTTTCTTT 16240 28 100.0 32 ............................ AATGTGATTTGTAATTTATATCGTATTACATA 16300 28 100.0 32 ............................ TATAGAGCTATTGAACACGGCGATACATTCCA 16360 28 100.0 33 ............................ TGACCGTTTAATTTTTTAGCCTTCTCGGCTTCA 16421 28 100.0 32 ............................ TTGAACGGATTTAACTTTAGTTGGATTATTGC 16481 28 100.0 32 ............................ TTTATACGGCATCCAATACCCATCCAACCAAT 16541 28 100.0 32 ............................ TTAACGGCGAGATCGACGAGACTGTACGCTTC 16601 28 100.0 32 ............................ TCATCAATGATCACTTTACCTTGTAAACCGCG 16661 28 100.0 32 ............................ TTGAACCAAACCGTAAATAGCTGCGCCTGCTA 16721 28 100.0 32 ............................ TGCTGCGAATACAAATGTAGGCGTCATAGCAA 16781 28 100.0 33 ............................ TAGCAACTGGCAACCAAAATCTAAAGCATGAAT 16842 28 100.0 33 ............................ ATCCACTCCCATTCGATAGATGCTGATCTGCCT 16903 28 100.0 32 ............................ AAAGCTTCTGTGTCTTCACAAGGCGTTATTAC 16963 28 100.0 32 ............................ AATTAAGGGAATAAGTAGGATAGCAAAGAGTT 17023 28 100.0 32 ............................ CAAATCAAACATTAGTACCTGTCTCAGACACA 17083 28 100.0 32 ............................ TGTCTGAAGCAATAAGTAGTTATATTCAGAAT 17143 28 89.3 32 .......A..G......T.......... TTCTCAAATTCAATCCATTTGTTATTTAGGGC 17203 28 89.3 32 .......A..G......T.......... ATATCGGGAACGTACCTGAATTTGAGCTTGAA 17263 28 89.3 32 .......A..G......T.......... AGTAAAACTATTGGTAATTGAACTGGACAGCG 17323 28 89.3 32 .......A..G......T.......... AGTAAAACTATTGGTAATTGAACTGGACAGCG 17383 28 89.3 32 .......A..G......T.......... TAACTTGAAATCAGAATTGCTTGCAAAGTAGT 17443 28 89.3 32 .......A..G......T.......... ATCCTCTTCGTAAATATCAAAACCAATTCTTA 17503 28 89.3 32 .......A..G......T.......... TGCAGAAGACTATATAGACAAAACTGTCGATA 17563 28 89.3 32 .......A..G......T.......... TTGCTAACGTTTTGAATTGCCGAAAAGTCTGA 17623 28 67.9 0 .......A..GT...AATCC....A... | ========== ====== ====== ====== ============================ ================================= ================== 48 28 97.5 32 GTTCACTGCCACATAGGCAGCTTAGAAA # Left flank : TTGAATATAAGAAAATGGTTAGATCGGTTTCCTGATTATGTGCATATCACAGGTGTACGTCCTGTTCCTGAAAAAGTAACGGCTTACGCAGTTTATAAACGTAAGCAAGTTAAAACCAACGCTGAACGTTTGGCTCGCCATCGAGTCAAAAGAGGAGATATTGGCTTTGATGAAGCATTGAGCCGTTATCTTCAAGTGGTGACAACAACTGATTTACCTTATGTCCAAATGCTAAGTTTAAGTACATCGGATGAACAAGATAAAAAGCGTTTTAAGCTATTTATAGAAAAGCAGATCACTGAAAAATCTGAAACTCAGGTTTTTAGAACATATGGGTTAAGTTCTGTGTCTACAGTACCCGAGTTTTAACCCAATATTTTTTCACTCTTTAACAGTCTAATTAAATCAATAAGTTATGGTGGTGGGTTGAAACTTTGGTCTTTTGTAGATTTTTAGTCTTAACTCACTGTTATAACTTTATTTTTTGTTTTAAAATTACT # Right flank : ATATAAACGCCTTAACATCTTCGCTAAATTTAGGAAAGTACAAACGATATGGAATAATTTTTATAGTAAATAAAAGATGATAATTTAAATGATAATTATTTGCATTATTAATTGCATTTGAATATTTGGTAAAATACAATGTGCAACAATTCTTACACAATCCCTCCGTAATTTGAGTTGCGTATTAACATGAATAAACAATTAACACTTCAAGCACTATCTCTCTCCATACTCTCAGCAATGTCAATTTCAACATATGCAAACGAGACTTCAGAAGACTCTTCCAAGCTTAAAACGATCGTCGTTACAGCAAGTAGTCAGGCGGTCGATGTTAAAGAAGCACCAGCCAGTATTAGTGTGATTACCAGTGAAGATATAGAAAAACAACCGGTGGGTAGTCTTGGCGAGTTATTAAGTAAAGTACCTGGGGTTACTGGTGGAATTAGTCCTAGCAAAGAAGGCTCTAAAATTAAACTACGCGGTTTACCTGACAATTACAC # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCACATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCACATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.20,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 11734-9664 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABVBW010000128.1 Acinetobacter bereziniae strain KCJ3K37 NODE_128_length_12064_cov_14.580380, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 11733 28 100.0 32 ............................ TAAGTTCAATGCCCGGGGTACTCCTTTCAATG 11673 28 100.0 32 ............................ ATCCTTTTCGAGCGAGCGCACAACCAGTACCA 11613 28 100.0 32 ............................ ATGAACCGATCGAAAAGAGTAACTGTAGTAAT 11553 28 100.0 33 ............................ ATTGCTTCACCTACCTCACCAACAAAGTTTTCA 11492 28 100.0 32 ............................ TAAATTGGCTATGCATTATATTCACATTTCTC 11432 28 100.0 32 ............................ CGCAGGGTCACCAGTTGAGAAACGAGTGGGAT 11372 28 100.0 32 ............................ AAAAATGGCGTTTGAATCCGCAAATGTTTGAT 11312 28 100.0 32 ............................ TACGACTTTGTATGTAAATGATGATGAAACAC 11252 28 100.0 32 ............................ GTAATGCAGTCATTACGCCTTTCTAGTCTTAA 11192 28 100.0 32 ............................ AATTTGTCCAACCCGGTACGTTAATTGGTTTT 11132 28 100.0 32 ............................ AAATGCTTGGTAATGGTGCTGTGACTGGTGAT 11072 28 100.0 32 ............................ ATTAAACCAATGGTGATTATCAAGACTGCGAA 11012 28 100.0 32 ............................ TTTAATACTCTAATTGCCTTTTCGACTTCATA 10952 28 100.0 32 ............................ TTGAACACCAACAAAGAGAGGTAATTCATCAA 10892 28 100.0 32 ............................ AACCCTTCAAAATCAGCAATTAAATACATACT 10832 28 100.0 32 ............................ TTAATCTGAACGTAAGGTTCATAGGCTGAATC 10772 28 100.0 32 ............................ ATAAGGACGTGTGATGTGATAATGACAACCGA 10712 28 100.0 32 ............................ TAATGTTGTCAATAGCCGTACTTTTAGCGGTT 10652 28 100.0 32 ............................ TTGAGCAATTTTTTCGGCTTGCGCATCGTCAT 10592 28 100.0 32 ............................ AGAATCTGGTCCAGATGTTTTCGCTCATTTTA 10532 28 100.0 32 ............................ AGAATCTGGTCCAGATGTTTTCGCTCATTTTA 10472 28 100.0 32 ............................ TGTGTCCGCAACCAGTGTTTCACGGATAATCG 10412 28 100.0 32 ............................ GACAGTAAAAGTTAAACCCTTGCCATTTATGC 10352 28 100.0 32 ............................ TAAAGAGTGCTTAACTCGATATGATGATTTTT 10292 28 100.0 32 ............................ AGTAAAACAGGGTGATTTCTCACCCTAAAATT 10232 28 100.0 32 ............................ TAATACACCCATTGGAAGATTGACTTCCTCTG 10172 28 100.0 32 ............................ AATGCAGGGGGTAGACCATGTCTCCAGAACAA 10112 28 100.0 32 ............................ ATAGGCACGTTGAACAATTGCAGATTCAATTC 10052 28 100.0 32 ............................ AGAGTAAAAACAATGAAGCGGATAATGCACAA 9992 28 100.0 32 ............................ TTATCAAGATTTTCAATATTCTTGCAGGTTTT 9932 28 100.0 32 ............................ AATCAACCATTAAAAAGGTTGTAAAAGATATG 9872 28 100.0 32 ............................ AATAGCACAGGCAATTATACAAACTGAAAGTG 9812 28 100.0 33 ............................ ATTTACATAGTTCAGCTTAGTGATTAATTGGTA 9751 28 100.0 32 ............................ TACCAATATTTGGGATGATGGTACATTTACTT 9691 28 96.4 0 .....................C...... | ========== ====== ====== ====== ============================ ================================= ================== 35 28 99.9 32 GTTCACTACCGCATAGGTAGCTTAGAAA # Left flank : GTATTATCGTTTGCAAGATAAATTAAATTTTAAATATTTGATAAATAAATTATTTTATATGAGGTATGTCGTATGATTCTGAGGAGTGAATCTATTAGAGTTTGTATTATATACTGCTATAACTTGTTGCTGATGAGGCAAAAGGGAACAATTTTGGGAAATATGCTTTTAATAGAATTACGATTATTCAAATATTTTAACCCAATATTTTTTTACTCTTTAACAACTGAATAAAATCAATAAGTTATATTGGTAAGTAAAAACTTGGGTCATTTGATGATTTTTAGGTTTAACTTACTGTTACCACTTTATTTTTTGATCTAAAATTAT # Right flank : AATTGTTAAACCTCTCTGATGATTTTAAAAATTTATAGTTGTATAAATTGTTTATTTTATAGCAATAAAAAAAGCCCACTTGAATGAAGTGGGCTTTTAGAATTTGGCTCTCCAACCTGGGCTCGAACCAGGGACCTGCGGATTAACAGTCCGTCGCTCTACCGACTGAGCTATTGGAGAATCTGCATGCGATTATAAGGATATATCACGAGTGGTCAAGCCTTTGATGTCATCTTTTCTTCATTTTTGACTTGTATGCTTTTTATTTAAACAAATAAGATCAAAATTAAAAAAATGGATTTGAGTGGTTGCAAAGCGAGAGCTGACTTGTTAGATTAAAAACATAAAGAGCGTTTAAGTTTGACTTAAACCGTGTGGATTTAACCAACTTGCCAGCACTAAAATGGCTAAATAGGAGACAGCGCGATGACGACGCTAACTATTTCTCAAATTTTTGAAAAATTTTCTTTTTATCAAGAAAACTACCTTTCTATCCTGCA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTACCGCATAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched GTTCACTACCGCATAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.70,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [83.3-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //