Array 1 1-4097 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHQZT010000032.1 Marinobacterium sp. A346 scaffold_32_length=29428, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 1 29 90.6 34 ---............................. GTGCCTCAGGATTAACTCAACTGCCGTGTCAAAC 64 32 100.0 35 ................................ ACAACTTGAGCGTCGGTAGTGTTTGAGCGTTGGAC 131 32 100.0 35 ................................ TCATACCCAGCGTACAGCATCATGGCCTTGTAGAC 198 32 100.0 37 ................................ ATGGAGTTGGCAGGTTATCAGGTGCAGTCGGTAGATC 267 32 100.0 35 ................................ CGTTGACGTCACCGAAAAGGTCACAGGCCAGAAGT 334 32 100.0 36 ................................ GTCTACTAGCACCTCAGTGATCGAGCATTTGCAGTT 402 32 100.0 35 ................................ CGTTTTTCAATGCAGCAACAACACAGCCTGAGGAG 469 32 100.0 37 ................................ CAGTGGTTTAAGATGCGATTAGGCGTCATCACCGCCA 538 32 100.0 35 ................................ AACCCTGCAATCAGTGAGTACGGCGGTATGAATGA 605 32 100.0 35 ................................ GCAAGATGGAGTTGATCGGCACCAAGAATGACGGC 672 32 100.0 34 ................................ CGAGTACAGCCAGTCATGCAGCACAGCCGCCTCC 738 32 100.0 35 ................................ TCGGCAAGCCGGTTATCGTGACTGATGCGGCTGAT 805 32 100.0 34 ................................ ACGATACTCGACATAAACACTATGCAGCCGGTAT 871 32 100.0 35 ................................ AAGATCCCCGGCATCGAGGGCGAACGCGCCAGCAT 938 32 100.0 34 ................................ ATGGTTAAAGCGCCAGCCTAAAGAGTTTCAGGAT 1004 32 100.0 35 ................................ TGACTAAGTGGCTCGATCAGTTCGAGAGCTTCGGT 1071 32 100.0 35 ................................ ACACAAAGGTTTACAGCATTGAGGCGCGCATGCTG 1138 32 100.0 35 ................................ TTCGTAGCGGCGGCATCGGCGTAGCACATCAAGTC 1205 32 100.0 35 ................................ GTTGCCCAGGCTGGCGCTGACGCCGGTTTGGTCGA 1272 32 100.0 34 ................................ ATCCACAACAATCTACCTTATGCAGAGCGCCTTG 1338 32 100.0 34 ................................ GGTGGCAAGCTTGGTCAAGAGATAGGCGTCATTG 1404 32 100.0 34 ................................ AATGCTACAGGCAAAGATTATGCTGTAGGCGACA 1470 32 100.0 35 ................................ CGCCGCGGGTCGGATTGCTACACTGTCCGATGCGA 1537 32 100.0 35 ................................ GCGCCTAACGAGTCCGTCTATCCTGAGGCCATATT 1604 32 100.0 35 ................................ CAAAGACGGCGAGCGTGACCTGGGCAAGTTCGACA 1671 32 100.0 36 ................................ CTGCTTGCGCCGCTGGCGTCAGGGTAGACGATCAGT 1739 32 100.0 33 ................................ GTTGAACGTAATCTGCACTGTGTCGCGAGCCGT 1804 32 100.0 35 ................................ ACAGATGGCGATATGATCAGCCGTTTCAGTTAGGC 1871 32 100.0 35 ................................ TCTTGCAGCTCTTTCTTGGCCTGCTGCTCGCGCTC 1938 32 100.0 34 ................................ AGGAAAAGGGCGCGTTGCTTGTACGCCTGATAAC 2004 32 100.0 33 ................................ GCCAGGCGTACACTGCCCGGGCAGGCCATCCAG 2069 32 100.0 34 ................................ TCGACAATCTTGCCGGGGTGTGTGCTGATGCGGG 2135 32 100.0 34 ................................ GCCTTCAATGCCAGGTACCTTGAACTCGTCTTTA 2201 32 100.0 35 ................................ CGCTGTACTCGCATGCAACTAATACTTTCATAATC 2268 32 100.0 34 ................................ ATACCCAAACCCTCCCCAACCAATACCGCGACAG 2334 32 100.0 34 ................................ AGCAAAATCAGCTTTTGCAGATTCGATGCCCTGG 2400 32 100.0 36 ................................ GCCTTGGATGACGCGCAACTGCCGGTCGTGGAAAAT 2468 32 100.0 34 ................................ CCGCAATGTATAGCAACTGAGAATTATCTGTAAC 2534 32 100.0 35 ................................ TACCACTGATCCAACCGGCGGCAACCCATCCTCAG 2601 32 100.0 33 ................................ CATATGATCCACAGCTCTGAGCCAGGTGCGCGT 2666 32 100.0 36 ................................ ATGGCTCAATCATACCACACTAGCTAAAAACCGCCC 2734 32 100.0 34 ................................ GGCATAGGCCTGCTTGATGTCATCCAAAGCTTTT 2800 32 100.0 35 ................................ ACGTTTTTGGTCGAGAGATACGGCCGCAACCGCCA 2867 32 100.0 34 ................................ GCGGCGTTGTTCTAGTGTTAATTCCGGCGCAGTG 2933 32 100.0 34 ................................ CATCGTCGGACATCCGATACCACTCACCTTCCGA 2999 32 100.0 34 ................................ GATGAGTTCATCGAGTTCCCGGACGGCAGCGACG 3065 32 100.0 35 ................................ ATGTTGGCGTTGATGGTCCAGCCCCATGAGTCCCG 3132 32 100.0 34 ................................ ATCCTGCCATTCAAGGTCTGCCGGCAGTTCCAGC 3198 32 100.0 35 ................................ CGCCTCTGGCTCGACCGCCGAGCTCGAGCAAAATA 3265 32 100.0 34 ................................ ATTACGCGGGTTGTTGATGGCAAGCTCCGCATCT 3331 32 100.0 34 ................................ TCCAGCTGCCCGCTGGTGGATCTGTCAGACTCAT 3397 32 100.0 35 ................................ ATCCGTCAACGATAACACCCGTGCTGAAACCGCCA 3464 32 100.0 35 ................................ TCCCGCCCCAACGCCCAATCCAAAAGAGCCCAGCG 3531 32 100.0 33 ................................ GCGAATAAGCCTACGCTCTCGGGCTTGAGCCGC 3596 32 100.0 35 ................................ CGATTAACCCGACCCTGACCGGCATCGCGCTGGCG 3663 32 100.0 34 ................................ ATGAAGCAAGAGCGGGTGGATATTCAGCACCCTG 3729 32 100.0 35 ................................ AAGCAGTGCCAGGAAAAACAACCGCTGCCAGACTG 3796 32 100.0 37 ................................ CAGATCAGATCGCACGTATCGCAGAGTGGGAGCGGCT 3865 32 100.0 36 ................................ GAGAAAACGCCCGCCCGCTTGGATTGCGGGGATTGT 3933 32 100.0 35 ................................ AGGAACAGCATGACCAGGGCGCTCACTTTGCGGTT 4000 32 100.0 34 ................................ TGCTGGCGCGATGCCGGCTGACTGGGCGCGCTGG 4066 32 96.9 0 ..........................C..... | ========== ====== ====== ====== ================================ ===================================== ================== 62 32 99.8 35 GTCGCACCCCACGCGGGTGCGTGGATAGAAAC # Left flank : | # Right flank : CTATGTGGACAGCAACCAGAAGAAGGCGCGGGAGCCGCTGCACCCTGTGCGGGTGTGTAAGGCATGATCTCTTGTGTTTCAGGCCTTGGGATAGTCAGCTATACACGCGGAGCCTCATAAGGTTAGAACAATGATCTTGGATACCTGCTGGGTCGTAGAAGACATTTTAGAATTAATACTATAAATAACCACCATGCCCCTATCCCCCGAAGACCACTCCCGGATCATTGAAATGGCCTGGGAAGACCGCACGCCCTTTGAAGCCATTGAGCACGGCTACGGCCTGGCCGAGCCCGAGGTTATCAAGTTGATGCAGCGCTCGCTCAAGCCGTCCAGTTTTCGCCTATGGCGCAAACGGGTGAGCGGGCGTGCCACCAAGCATGCCCGGTTGCGCCATCCTGGTGTCAGCCGTGGCTACGCGCCGGGGCAGTACAAACCACGTTAGCCGGTCGGCTTCTGCCGATGGCGCGCCGGGGGTATCATGCAGGCATGAACCTGAC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCCACGCGGGTGCGTGGATAGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCGCCCCACGCGGGCGCGTGGATAGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-10.80,-10.90] Score: 0/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 2099-64 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHQZT010000024.1 Marinobacterium sp. A346 scaffold_24_length=35800, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 2098 32 100.0 34 ................................ GCACTGGTCAACCGTGGCCTTGTCGCCGATCTGG 2032 32 100.0 34 ................................ GCTGTAGACTCCATCATCGCAGCCGGAACCGGCG 1966 32 100.0 36 ................................ CGCAAAATGCTGGAGGAGTGGTAATGGCCGCACTGC 1898 32 100.0 34 ................................ TGAGGAATACGAAACAACGATTACCGCCCCGGAA 1832 32 100.0 35 ................................ ATCCACCGGTGACTATTGCCAGCTTACTGAACCTC 1765 32 100.0 34 ................................ AAAGTCGAGCACACCGGCTGGCGCCCCGGCGATA 1699 32 100.0 35 ................................ GCAATGTGGGTGAAGCGTTTGAACTATGTCTGCGT 1632 32 100.0 35 ................................ TGTCTCTGGTGTCTGGCGCTGCAACCGTTATGGAT 1565 32 100.0 36 ................................ AACGCCTCAAAGCACGGCTATATTGCGATCCACAAC 1497 32 100.0 37 ................................ TTTATCAACTCTAGGCGTAATACCGCCACTTTTCCCA 1428 32 100.0 37 ................................ AAGAACAGGAACAACTGATCCAGCAGTTGCAGAGCAA 1359 32 100.0 36 ................................ GCAGGCAGGATATGATCATCAAGACGCTGAACGGAG 1291 32 100.0 35 ................................ CTGTGCCTGCTCCTGCAGATCCACCACCCGGGTTT 1224 32 100.0 35 ................................ AGCAGTAGTGAATCAGAGTCAGCCACCCGGCGCAT 1157 32 100.0 34 ................................ CCATCCCTAGAATAGAAGTCCTCAACCTCCTGTC 1091 32 100.0 35 ................................ TGATCCTGGTCATACTCGACCGGCTCTAGCTGGCC 1024 32 100.0 35 ................................ ACCTTGGCTATGCGCCATTTGGATAGCCTCAGCTG 957 32 100.0 35 ................................ GATGATCAGGTAGCCCTCCATATCGCCACCTGACC 890 32 100.0 33 ................................ CAATGCCTGCGCTACTTCCGGAAAGTCCTCTTT 825 32 100.0 35 ................................ ACAGCCCCGACTGGTGGCGCTGCCTCCGGCATCCC 758 32 100.0 33 ................................ TCGGATTCGGCACGTACTCGCTGCTGCTCTGCC 693 32 100.0 35 ................................ TCAACCTGCTGACCCAGAGTTTCGGCGGTCGCCTC 626 32 100.0 35 ................................ AATAGCTTGCCGCGCGGGTAGTCAGGGTGGTCACA 559 32 100.0 34 ................................ TGCAGTACGCTTTCAATCGCATCATCGCCTTCAC 493 32 100.0 34 ................................ TAGATAAACGATCCTGCAACCGCGTGGCGACGCG 427 32 100.0 35 ................................ AGCTTGCCCGATCAGTTGTGTCCAATGTCGCTGCC 360 32 100.0 35 ................................ ACGCCCACCACCGGCACCCTGTGGATTCGCCCTGA 293 32 100.0 34 ................................ ACGCCAAAGACAAAGAGCGACTGACCGAGCTGGA 227 32 100.0 34 ................................ AGTCCATCGGCACCTTTGCACCTGGTACTCGTAC 161 32 100.0 34 ................................ TTTAAGGGCGAGTTTTACAGCAAGTCAGACCTTG 95 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ===================================== ================== 31 32 100.0 35 GTCGCACCCCACGCGGGTGCGTGGATAGAAAC # Left flank : CCACCCTGGACGTTGAAATAATGCTGGTGCTGATCACCTATGATGTCAGCGTAGTGACATCCGACGGGCAACGCAGGCTGAGAAATATTGCCAAAACCTGCCTGGATTACGGGACCCGGGTGCAGAACTCCGTATTTGAATGCGAAGTTACCCCTGCACAATTGGTCGTTTTAAAGGCAGAATTGATGGATATCTACAATCCTGATGAAGACAGCCTTCGGTTCTATCATTTGGGTAAAAAAGGGCGACAAAAGATAGAGCACTATGGTGCTAAAATCGTGCCCGACCCTCATTCCTCGCCGCTTATCCTGTAAGAATGGCATTCCGCTACCCTTGGGTTCTCATTAAATACCGGGAGGGTTGGCGGAATCTTAACTGTTTGAATAATAAGGTATTTTAAAACACCTTCTGTTCTGCTTCCTGTCGTTTTTCAATCTGTAGTTGTCGATAGCGATAAATTGGTTATTTTCCTTTGTTCTTTAACAACTTAGACTGCTGCT # Right flank : CCCCACTTCAGAAGAAATGATGCGCAGGCTCTACCGCGTCGCACCCCACGCGGGTGCGTGGATA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCCACGCGGGTGCGTGGATAGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGCCCCACGCGGGCGCGTGGATAGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-10.90,-10.80] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [35.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //