Array 1 2896911-2897331 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP014704.1 Methylobacterium aquaticum strain MA-22A chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== =================================== ================== 2896911 31 100.0 34 ............................... AATCTCGGCGAGGCGAACACGGGCGCCATCGGGA 2896976 31 100.0 33 ............................... GACGCCGTCGGCCGCGCCTTCCTGCTCGCCGAT 2897040 31 100.0 34 ............................... AGGCCGTCGTTGAGCGCCTGATCGCGCTGCGCTA 2897105 31 100.0 34 ............................... CGGCACACGATTGGCGTGAACATAGCTCAGCGCT 2897170 31 100.0 35 ............................... CTGCGCGATCTCGATGCCGGCTGCGCACTTCTGCG 2897236 31 96.8 33 ............................G.. CACCTCCCCCGGAGTGGAGGATGGAGAGGGGTC 2897300 30 74.2 0 .....C...........A...TC.-..CG.T | GC [2897320] ========== ====== ====== ====== =============================== =================================== ================== 7 31 95.9 34 GTCGCTCCCTCACGGGGGCGCGGATCGAAAC # Left flank : CCTTCTCGGTCATCCGGCGCGGCTCCAGGAAGCTCGGGAAGTAACTGCCCGTCCGCAGCTTCGGGATGCGCAGCTCGACGGTGCCGGCCCGCGTCTGCCAGTCCCGGTCACGATACCCGTTGCGCTGGGCCAGCCGCTCCGGGTTCTTCTCGCCGTGGGCCGCGCCGGTCAGGCCGCCCACCTCCAGTTCCATCAGGCGCTGCGCGGCAAAGCCGATCATCTCGCGCAGCACGTCCGCGTCCGCGCTCTTCTCAGCCAGGGCGCGCAGGCTCATAACGGCATCGGTCATCGGGGGTCTCCCGGGTTCGGGGTTGGTGCTCGCAACCCGATCCTAACCCGTCACCGCCGATGGCCACCCCCGCGAGAGATCCCGCCTGCTACAGCGCTGTGAAACGCGCGCAGGCGGGCTCTCCCGCTCTCGGTCAGCTACACCACTCCAAGGGACACGACCGGCGCGGATCGAAACCCCGAGATCGCTCGCCATTCCGGCGACGATGCGC # Right flank : TGATGTTGTCCTCCGGGGCGCGGTAGGCGTCGTCCTCCAGGCGCAGGCCGGTCCGGGGATCGTAGAACGCCATGTCGTCGAGGCGCAGCAGGGCGCCTTCGAGCAGGGGGTGGACGGGCCGCAGGCGCCCGAGCGCCAGCCAGCGGGCGCGCAGGGCCGGGGGAACCGGCACGACGTAGGCCTGGAGGCGGCGCAGGTCGTCGCCGAGGGGGCGGTCCATGGCGGCGACCCGCGCGAGCAGCGCCTCCGCCCGGTCGTCGTCGGGGATGGCGCGCCACGGCACGATGACCGGCTCCATCGCCTCGTCGATGAGGCGGAACGCCCGGGCGATGCTGGCGAAGGGGAAGGCCTGCGTCGTCGCCCGCTCGGCGAGGGCGGGCAGGATCGGCCAGGTCTCCCCGTCGAGCTGCGGCGCGTCGAGGGCTTGCTCGCCCCGGCGCCAGTAGACCTCCTGGAAATACGCCCGGATGGCGTCCGGGGCGAGCGGGTCGTCCCGGGTC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCTCACGGGGGCGCGGATCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCTTCACGGGGGCGCGGATCGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.40,-4.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [30.0-26.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 4981495-4981952 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP014704.1 Methylobacterium aquaticum strain MA-22A chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 4981495 29 100.0 32 ............................. CACTGCATCTCGACGATGGTGACGCGCCGCGT 4981556 29 100.0 32 ............................. ATTCCCGGGCTCGTAACCCTCGTTGTTCCTGA 4981617 29 100.0 32 ............................. AGACGCAAATGCGGCTCGACACGTCGGGCGTC 4981678 29 96.6 32 .....................G....... CCTCATCGTGAAGGAGACGCTTGGCTCCTCCG 4981739 29 100.0 32 ............................. TCGGGGCAGCAGAAGAAGGGCAACGAAGCGAC 4981800 29 96.6 32 ............................T CACACCTGGATTGCGAAGCCGGGCCGCCCCAG 4981861 29 89.7 32 ...........C.AT.............. GCCACCTTCACCAGGATCAACACGCAGCTCGT 4981922 29 86.2 0 ...........C.A...........T..G | AT [4981946] ========== ====== ====== ====== ============================= ================================ ================== 8 29 96.1 32 GGCTCCCCCGCACTCGCGGGGATCGACCC # Left flank : CCGCGTCGAGCCCCTGCCACCAGACCGGCCGGCGGCGGGGAAACCCCTTCACGTCCTCGCGCCGCAGGGGCGGCAGGTGCTCGCCGAAGCGCTGGCGATACGCGGCGTAGAGGTCGTCGCGGTGCCCCGCCTCCTCCTCCGCCATCGCCTCGAACACCCCGGCCGAGCCCGGCAGGTCGGCCCGCAGGCCCTCGGCGAAGCTGCGGTAGATGCGGGAATCCTCCTCCTCGCTGGCGATGGCGAGGGCCAGCACCTCGCGTTCGGTGAGATCGGTCAGGGCCTTCACGGGCATGCTCCAGTCTGGAATGGCTCCAATCTATAGATTGGATTCATTCCAAACAAGTGCTGGCGTGCGTCGCGCCATCCGGGGCCGGGCGTCGCGCGGACGATGGCCCTCGACGACCGGGCCGGTCTCGGGCATCCTGGGGCGTCGCCGGTTGCGTATCTGCCCCAACGGCATCTTTGACATCGTGAACGGTATCAGCGAGTTAGCTGGCAGA # Right flank : GCCTCGGAATGCGTGCGTTGCCGCACGCCGCTGCCCGCATCTGCGCCCGCGCGGCGGTTGCCTCGCGGGCCCGAACGGAGCATGACGGCGCCCGGATTCGCGCGGGCTCCCTTGTCGTCCCGCGGGTGCGGGGCCGCGCGGGGTCTCTTGTCCCGCGCACCGAAGAGCCCGTCCTCCCGAACGAAGTGCTGCCGATGAGCGTCGTCACCCGCATCGCCCGCAGCCGGGCCGCCCAGGAGAGCCTCGGGTTCCTCGGCGCGAGCTACCTGAAGCTGGTGCAGGGCACGAACCGCTTCAGCCTCGATCCGCCCGGAGCCTACGACTGGCTCACGCCGCTGCGGCCCTTCATCATCGCGATGTGGCACGGCCAGCACCTGATGGTGCCGTTCGTGCGCCGGCCGCAGGACCGGGCCGCCACCATGGTGTCGCGCTCGGTCGACGGCGGGGTGAACACCGCGGTCCTGGAGCGGATGGGCGTGCGGGTGATCCGCGGCTCGGGC # Questionable array : NO Score: 3.04 # Score Detail : 1:0, 2:0, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.98, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCTCCCCCGCACTCGCGGGGATCGACCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-23.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA //