Array 1 155189-151197 **** Predicted by CRISPRDetect 2.4 *** >NZ_QFAR01000001.1 Pelagicola sp. LXJ1103 contig1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 155188 36 94.4 30 .GG................................. TTGTTTGCGTTAAGGCCAATCACACTCATT 155122 36 100.0 30 .................................... ACCGGAATGACGCGAAGCGTTCACTGGTCA 155056 36 100.0 30 .................................... GGTGTCTCAGCGCATCGCGGAGGTTGATAC 154990 36 100.0 30 .................................... GACCACCCCGCCGATCCCAGTGATGAGCTC 154924 36 100.0 30 .................................... ACGCGACATCGCGGGCCAATATTCTGAATG 154858 36 100.0 30 .................................... GTTCTTCATCTACACGGGACAATGCGGTTT 154792 36 100.0 30 .................................... CTCAGCGCCCGTGCGAAACAGCGCATCAGT 154726 36 100.0 30 .................................... AGATGCAAATGCAGCTCGCGAGTGTCACGG 154660 36 100.0 30 .................................... CTTGACGGGCTGCACGGCCCAGCCGGTCCA 154594 36 100.0 30 .................................... AGATTGAACCGCAGACCGTTGTGAAGATCA 154528 36 100.0 30 .................................... TTGATCTTTGTCGTGGATGAAATCGCTTCA 154462 36 100.0 29 .................................... TTGAAAAGCTGGTCCCCGCGCACCTGCCC 154397 36 100.0 30 .................................... GACGGTCCCAGAGGTCGCGGTAGAGCCTTT 154331 36 100.0 30 .................................... GACGTGGTAATCAATGCCACCGCCCTCGTC 154265 36 100.0 30 .................................... AGCGTTTTATAACCGGCGTCGGTGACTTCA 154199 36 100.0 29 .................................... GGTCATGCCCAGCGGAAGCTGCACCGATG 154134 36 100.0 30 .................................... CGGCGGCGGTGTGATCAGGTGTTTCATGAG 154068 36 100.0 30 .................................... TTATTCATGCGGTCGCCAGCGGTCCAGCCA 154002 36 100.0 30 .................................... CTGGCGAGGCTCACATGATCTACCGCACCA 153936 36 100.0 30 .................................... CCACGGGAGCAGCTCCTCGGGGCACGTGTC 153870 36 100.0 30 .................................... GCCACCCGCAAAGTGACATTCACGGCCGGC 153804 36 100.0 30 .................................... ATACGCCGAGGAGGATGCGCAGTTTAGCGC 153738 36 100.0 29 .................................... GGTCGAGCCTCAAACCGTTGTGAAGATCG 153673 36 100.0 30 .................................... CGCCTACCAAGAGGGCCGTATGAGCGATAC 153607 36 100.0 31 .................................... TTCGCAGATGATGAGGAGGATGCCTAATGCA 153540 36 100.0 30 .................................... CGCAAAGCGCGGCTGATGGAGCTGGAGCCA 153474 36 100.0 30 .................................... GACACCCGCAAAGTGACATTCACGGCCTGC 153408 36 100.0 30 .................................... TGCAGTCCAGCCATCATGCTACTCCGTGTG 153342 36 100.0 31 .................................... TCGAACCGATCCGCAGCGGCCCTGGCAAAAT 153275 36 100.0 30 .................................... CGGCAATGATCGCGGCGGTGCGCCGCTTGC 153209 36 100.0 30 .................................... GAAGGCCCCGTGCGGCGGAAAGATCGCGCT 153143 36 100.0 30 .................................... TAAATTATGGCGCGCAGGGCGCAGGCGATC 153077 36 100.0 30 .................................... CACGAGCCTGTAGACATAGCTGCGCCCCTT 153011 36 100.0 30 .................................... TGGCGCTTCACACTGATCGCTGGACGGGGG 152945 36 100.0 30 .................................... CGACCACCCTCCTCGTGGGACTTGCCCTCA 152879 36 100.0 30 .................................... ACCATGCAACTGAAAGACGCGAAACCCGGT 152813 36 100.0 30 .................................... GCGCGGGGTGCAGGAGCTCGAGGCTCACCT 152747 36 100.0 30 .................................... CCGCGAGGTTGTCTCAAGAGCAACCGCCCC 152681 36 100.0 30 .................................... GGCGGCTGATAGCATCCGCCAGTGGGCGCA 152615 36 100.0 30 .................................... ACATGAAGGCGACCGTCTATGCTGACGGCA 152549 36 100.0 30 .................................... CACGCCCCTGCGCCTCCAGTGCCTCGCGCA 152483 36 100.0 30 .................................... GGTAAAGGCCGGTGATGCAGCGGCATCGCT 152417 36 100.0 30 .................................... AGTGATCGCACTGGATCAGGGCACCTATCA 152351 36 100.0 29 .................................... CTGGCGTGTAATATTCAGCAAGGCGCTTG 152286 36 100.0 29 .................................... CCCATAATCTCCGATTCTTCGGTCTTGCC 152221 36 100.0 30 .................................... AGTTGTCTAATGGCAAAACCGACTAAACCT 152155 36 100.0 30 .................................... CGCCGTGAAACCATCATCTTCGGCACTGGC 152089 36 100.0 30 .................................... AAGGCATTTGTCCCGGCCACGTTGCAGACC 152023 36 100.0 29 .................................... TGGATGAAGAACGGCAGATCCGTCGATGA 151958 36 100.0 30 .................................... CCGAAATGCAGCCTTTACATGTGCGCGCGC 151892 36 100.0 30 .................................... AAGTGCATCCCTTTCCCGTTGCAGTGCCAG 151826 36 100.0 30 .................................... GCGCAAAACGGTGATGCTGTCGGGTCGGAA 151760 36 100.0 30 .................................... CGAATCACCAGCGAATCGGGGGTGTTTCTA 151694 36 100.0 30 .................................... GGCGCCTTGGGAAAACTGCACGAACTTATA 151628 36 100.0 30 .................................... TTTGATCGGGCGCGCAACGATATGCAGACG 151562 36 100.0 30 .................................... TTTTCGTTTGTGCGGTCCTTCTATGTGGTT 151496 36 100.0 30 .................................... TGTGACGGTTGACCAGTTTCTTGGCGAGGC 151430 36 100.0 30 .................................... GCAAAAAATCCAGGCAAGTCAGCTCATCAA 151364 36 100.0 30 .................................... GCCTCTAACGCCCGCACCGGCGGCTGGTCA 151298 36 100.0 30 .................................... CAATGGTCTCCGCATGGCTCATTTCTGGAA 151232 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 61 36 99.9 30 GTTGCGGCTGGACCGCGGATTTTGAACAGCTACAAT # Left flank : GGAACCAGAGCCAGCTACTATGTCTTCTCAGGACCTCGGCGGCGCGCGGGCTCTTGCGGGTGGAAAGGGTACCCCTTGCCCGGCAACCGCTGCTTGCCGCCATGAAAGTTGCACCAGCACCCCTTTCGTTTCAGACAGTGCGGCGGCCAGTTCCTTCAAAGTAATGTCAGGTTCAGCACGCAAGATGACGAGAAAGACGTCGCGATGCGGGGCAAGCCTGCCAAAACGTCCCAGCGACCTGCCTTGTCGTTTTGCAGCGACCAAGCCCCGCGTCCGATACTCCGCCGCAAACCGCACAGCCGTAGCAGGACTGGCACAAAACACCCGTCCGGCAGTGCGCGCCGAGTGCCCTTTCGCCACATAATCACAAATCCGTTGCCGAAGGTCCAAAGAATAAGGCTTGCCCATGATCCACCTTCCAAAGGAAGTGGAGCAGAAAATGCCACATTGTGAATCCCCGTTCGCCTCACATCAAACGCAAAACGCTTTAGAAGACGGAC # Right flank : AGATCGCCCGCTATCTTCTTGGAGTTAAAAGAAAATAGCGGGGGTCTATTGTGGTTAATCCAAGCGAATCGCATCAAAACATTACCAGTTGTTCCGGATTCTTTCGGGCCTTACGTCGACCCTGATCCGAGAAGTGAACGATATCACGATATTGTCGATCCGTAAAATTCAGAATCTGCACGTCCCCCGAATCGGGTAAATGGCGTGAAATCCGGTTCACACGGGTCTGAAACGCCTCTTTGCCGTTTACGAAACGGGCATAGACGGAAAACTGGCTGCGCTCGAAGCCCTCATCCAGCAAAAAATTACGGAATTTTCCGGCGGCCTTGCGCTGAGGTTTGGTGTCGGTCGGAAGGTCGAACATCACAAGAATCCACATCAGACGATACCCCGATAAAACTTTGATTTCATGGTTCATGCCCCCAACCCCGCAAGTGTCAGTGGGCCGGGCGTGTTTGGCAGGGCCAGCGCAAGCCTGCCCTCCTCGAAACTTTGGCCCA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCGGCTGGACCGCGGATTTTGAACAGCTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTGCGGCTGGACCGCGAATTTTGAACAGCTACAAT with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.00,-5.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //