Array 1 1511-3706 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHQUY010000054.1 Prevotella stercorea strain MSK.21.24 NODE_59_length_19924_cov_219.675, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 1511 47 100.0 29 ............................................... TTATGCTGAAGAAGCTAAACGCCTTGAAA 1587 47 100.0 30 ............................................... AACAATTTCTTTTTTCAATCATAATCGCAA 1664 47 100.0 30 ............................................... TCTTTGCAGCGTGTTTAAGATTAAACGCGT 1741 47 100.0 30 ............................................... TAAATTCCTTCAGTTCCATAGTAAAAGTTT 1818 47 100.0 30 ............................................... CGTCTTGTCGTTGGGTGATAAACTCCAGCC 1895 47 100.0 30 ............................................... TCTTGTTGTCCATGGCCATCGGTGCCCAAC 1972 47 100.0 29 ............................................... TCCTCCTCGGCTGCTGTCAGATCTACGTT 2048 47 100.0 29 ............................................... TCACCGCTTGTTGCTCCAAGCTTTGCGCG 2124 47 100.0 30 ............................................... CCATATCTCTTGGCGTGAGTATGTTGAGGA 2201 47 100.0 30 ............................................... AATGACCTTTATGACATTCCACCTTCTAAT 2278 47 100.0 30 ............................................... GGTTATGAAGTTTTGTCTTATTCTGATTTG 2355 47 100.0 30 ............................................... AGACTGGGCGAAGATAGAACAGGCGGCAAA 2432 47 100.0 30 ............................................... GGGCGAATCCGTACAACGTGCGGAACTCGT 2509 47 100.0 29 ............................................... TATCTGTCACGCCCTCCAGTGTCTTAATA 2585 47 100.0 29 ............................................... TACCGAGTGGCGTTTTATAACAAAATACC 2661 47 100.0 29 ............................................... TGACCGTTTGAACGATGCTTTATTTTATC 2737 47 100.0 30 ............................................... CTAAAACTCTCATGTTATCCACCACAAAGG 2814 47 100.0 30 ............................................... ACTCTTTATAATTTCCATAGTTTCGTCGTT 2891 47 100.0 30 ............................................... TTTATCTGTTGCAAAGGTAGCAATAATATT 2968 47 100.0 30 ............................................... GGTCGGGTTCTTTCTGCAATGTTGGCTTGA 3045 47 100.0 30 ............................................... CGGTGACGTTAATATGCATGCGTCTTCTGA 3122 47 100.0 30 ............................................... TCGCGATTTTCTCCTGTAGGTCTGGCGTAT 3199 47 100.0 30 ............................................... TTTACTTCTTCCAGCTTAGTTATACGGTCT 3276 47 100.0 30 ............................................... GCCCATGCCAACTGCGGAAGCGAGCGCACG 3353 47 100.0 30 ............................................... GCAAGCACATTCGATTTCTACCAGCTTCGT 3430 47 100.0 30 ............................................... TACCCAAAGCGTGGCATTGACTGGTCGCAG 3507 47 100.0 30 ............................................... TTACGGTTTAGTTGCAGTCGGCAACTTAAC 3584 47 100.0 29 ............................................... GATATTGTCAATCGGTACACGCTTATTGC 3660 47 89.4 0 ........A................................TC..CT | ========== ====== ====== ====== =============================================== ============================== ================== 29 47 99.6 30 GTTGGTGATTCTACCGCAAAGGTAGTTAATTCTGAGCAAATCACAAC # Left flank : TAAACTATAATTTTGCAATGAATCGTTTTAGTGAATATCGAGTTATGTGGATACTTGTTTTTTTTGATTTGCCAACAGAAACAAAGAAAGACATAAAAGAATACACCATGTTCAGAAAGCGGTTGCAACAAGATGGCTTCACCATGTTTCAGTTCTCCATTTATGTACGCCATTGCGCAAGTATGGAGAATGCAGAAGTCCACATGAAGCGTGTCAACTCTTTTCTTCCTGAATATGGAAAGGTCGGAATAATGTGCATCACTGACAAGCAGTTTGGAAACATTAAGCTTTTTTATGGGAAGAAGCCACAAACTCCGAATGCTCCAGGTCAACAATTAGAGCTTTTCTAACTATCGTTCTTTGTTAAAAATACCAAGCGTCATATTAAATAGAAAAAGAGGTCTTCTTAAAATTTGAAGAAGACCTCTTTCTAACACCAACTTTTTATAATTCTAAGAACTATGCTAATTCGCTTATTTACAAGTAAATGCGCATTCTAT # Right flank : TAATAACTCTTGCAGATATAAAAACCGAGTGCGTGAAAAAATCTGCCATATCTTCCAGAAATAGCGTAATGGGTTGGAGGTGAATATGATAAGGGCTGGAAGATAACTTGAATGAGAGGGTTATCTTCCAGCCATCTTCCAGCTTTGTTTTTTGCCTTTTATATTATCACCGCTGTGCCGCTGCATGTCACCATGAGCATCGATCCGCCCTGTCCTACGGTTTCGTAGTCGAGGTCGATGCCTACGATGGCGTTGCAGCCGAGGCTCTCGGCACGCTGCGCCATTTCGCGCATGGCTGAGTCCTTAGCTTCGCGCAGCACACTTTCGTAGGTGCCGCTGCGACCGCCGAAGAAGTCGCGCAAGCCTGCCATGAAGTCTTTGAAAACGTTGGCGCCGATGATGGTTTCGCCGGTTACTACGCCGCGATATTCGCGGATGGGGTGACCTTCGAGGGTGGGTGTTGTTGAGAAAATCATAGTATTGTTCCTTTCTTTGGTTTG # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGGTGATTCTACCGCAAAGGTAGTTAATTCTGAGCAAATCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.20,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //