Array 1 44-745 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB822431.1 Lactobacillus sp. ASF360 acMPL-supercont1.26, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 44 29 96.6 32 ............................C AAAAATCTTGCAGAAAAAATGCAAGGTTTGTA 105 29 100.0 32 ............................. GTTATATGGAAAAATGTTCAAGTAGGTAGTTA 166 29 100.0 32 ............................. ACTTTGTTGACTCTTTTATTTACCAAGTCGAA 227 29 100.0 32 ............................. TTTGAAAATTTCCACAATCCTACAATTTTTCA 288 29 100.0 32 ............................. AATGAATTCATGATAGCTCTACCTTGATCTGC 349 29 100.0 33 ............................. GTAAATTCATTGTAGTTAATGAATCCGATAATT 411 29 100.0 32 ............................. ATAAACCCAAAAGACATACAGTATGTTTTAGG 472 29 96.6 32 ........T.................... AATTCGCGTTTTATTTATCCTGCAGGACAAAG 533 29 96.6 32 ............................C TACAACGAGTTTATAACCCAAAACTGGTAAGT 594 29 100.0 32 ............................. CAATATAATCAGTCTTTAGCCAATGCTGAGGG 655 29 100.0 32 ............................. TATTCAGCGTCTTTATCTTCAGTAGTGAAGAT 716 29 86.2 0 .....................T..T.TT. | A [737] ========== ====== ====== ====== ============================= ================================= ================== 12 29 98.0 32 GTATTCTCCACGTATGTGGAGGTGATCCT # Left flank : GAGGTGATCCTAATACATTCCATGACCAGCATACACACCAACAG # Right flank : TTGAGGATGAGTCCTCAACAAGAAAAATTATAGAGCTATCAACATGATTTCCTAAAGGTTGTTTATGGAAAATCACTCTAAATGTCTCTAAAATGAAGATGACATGGATAGAAAGGGAGAACAATTATGAACGCAATTTTTGAAAGAAGAGCTGTTAGAGAGTATAGGGATCAAAAAGTTGATGATGAGAAAATCAAGAAACTAATTGAATCTTTTCAAGCAGCTCCGTGTGCACTCCATCAAACGGATGTGATGGAATTAAGTGTAATTACGGTTCCTGAATTGTTGAAAAAGTTAGAAGAAAAGACTAAGAATTCGTGTTATAACGCACCTTTGGTATTTATGATTAATACTAAAAAAGATAGTCAATTTGGTGAGAGGGATGCTTTTGTTGCTGCTGAAAATGTGATGGTTGAAGCATTTGACTTAGGCTTAGCTTCAGTTTACGTAATGGGTGGTGTAATCGCTCTTAATAAATTTCCAGATTTACAAAAAGAATT # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCTCCACGTATGTGGAGGTGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.72%AT] # Reference repeat match prediction: F [matched GTATTCCCCACGTATGTGGGGGTGATCCT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.40,-8.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 6388-7577 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB822440.1 Lactobacillus sp. ASF360 acMPL-supercont1.9, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 6388 29 100.0 32 ............................. ATTAACTATTTCTCCATCTTCATTCTTCTTGC 6449 29 100.0 32 ............................. CAGCAAATGGAAAAGACCGAAAAGCAAGAAAT 6510 29 100.0 32 ............................. TTCACAGAAGCACTTAACAAAGAAATGGAAAG 6571 29 100.0 32 ............................. GACATCCATCGTCTTTTTATCGGCGTCATCTA 6632 29 100.0 32 ............................. CAAGTTGCTTTACGTAAACCATTTTTTCACCT 6693 29 100.0 32 ............................. TAACAACAAAAGGTGAAGTAAATGGAAGAAAG 6754 29 100.0 32 ............................. GAACCCATAATCAAGCCCAAAATAATCATTTA 6815 29 96.6 32 ............................C CCTTTATCCCCGTTTAAACGGTAACAAACACT G [6832] 6877 29 100.0 32 ............................. CCACAAATGAAGCTTTATCCACATGTTAAGTA 6938 29 100.0 32 ............................. TAACGCTTATTTATTTGGTAATTTAAGCAGAA 6999 29 96.6 32 .....................A....... CAATTTATCAAATTGAACATGATTTAAATTTG 7060 29 96.6 32 .....................A....... TTTTTTGTTGCCTAGAACCCTTGAGAGGTACG 7121 29 93.1 32 ..........T..........A....... CAAGAGTGCCCGCTTGTTCGACATGCCCTCCA 7182 29 96.6 32 .....................A....... GGACAAGATTTCAGCAAAGAAGTCAAAAAGAG 7243 29 96.6 32 .....................A....... CAGCATCAAAGCGATCAAAACCCCTCCTGCTT 7304 29 93.1 32 .....................A......C TTTGCATCGTCAGTCGTCGTCGTGTCACAAAC 7365 29 93.1 32 .................A..........C GATGGACACGATTCGCCGGAAACTGGGAATCG 7426 29 89.7 32 .........C......C....A....... AAATGGAAGTAATTTCCTAAATCCTTCTGGTA 7487 29 86.2 33 .......T......A......A......C CTCATCATCAACTTTTAAAAAAGTGGTCATTAT 7549 29 82.8 0 ........T.....T......A....TT. | ========== ====== ====== ====== ============================= ================================= ================== 20 29 96.0 32 GTATTCCCCACGTAGGTGGGGGTGATCCT # Left flank : NNNNNNNNNGTTATGGCGATAAGGAAAAATAAATTAATCTGAATTGAAAGGTATGATAATTATGGAACTAGGAAAAGTTGCCCAAGTAAATTTAGATTTAGTTGATAACATTGATAATTGGAATTTTGATAAGTTAAAGTGTGCTAAACTACAAGAAGTAGGAATTGAAAAATCAATTATATATTTAGATAAAAAGAGTAGCCAACTTTTTATCACTTTAGATGTGAGAGATTTTAAATCTTATCAGAAATTGTCTACTCAATATCAGAATGCATGGTGGTCACATCTAGAACCGTTGCCTAGTATAGATGGTAAAAGCCTTTTGGATTATACTTGGCATGAAGTATTTAAAATTGAAGATGATGAATAAGACTAAGGAGTGAAAAATTTCACTTCTTTTTTAGGGGGAGAAAGAGCAAAATATGATATTTTAAATATAAAGTAAATAAATTTGAGGGTATAATAAGAAATGATTATTGATATGACGGGCTTTTTTTAGT # Right flank : TGTAAGAGAAAAAATCAATGAAATGCGAAGATAAAGGAGGGCTATCTCTTCTTGGATATTAAAATAAAGCATAGTATGAAGATGGTAGAGTAAGAATTTTGGATTGCCATGTGACATATAATCTATATTGGGGCGTGATTGAAATAATTAAAGAGAGGATAACTCTAAATACAGATTCTTTAAGTCTAGTCGAACTAACACAAATTATTCATCAATGCAAGAATAATAGATTATCTTTTGAAAAAGGCGTCGGATGAATTAGAAAATTGAAGAAATTAGAAATTTTCGGATGGACACACATAATTCTAATATTTGGATGCTAACTTTGAATGTAGAGAATGTCTTTAGATATTGGAGAATCGTTCCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 5.75 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCACGTAGGTGGGGGTGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCACGTATGTGGGGGTGATCCT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.40,-10.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-18] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //