Array 1 6295-6750 **** Predicted by CRISPRDetect 2.4 *** >NZ_UNRI01000006.1 Dietzia sp. Alg238-R159, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 6295 28 100.0 33 ............................ CTTAATGCCACCTACGGGACCAAGGGTGAACTC 6356 28 100.0 34 ............................ GCACGTAGACGATCTGACTCGGCGGATTGTGGAG 6418 28 100.0 33 ............................ CGGCGGTGGCGCAGTCAGCCGAACCCGCAGCGA 6479 28 100.0 33 ............................ CTCCAACCACGGCACCCGCTTCCCGGAGGCCGG 6540 28 100.0 33 ............................ CGTGCTCCCAGGTGACGGGTCCGCCTGACGCGA 6601 28 100.0 33 ............................ CTCGCCGAGTTCGCCGACGTGCAGGTAAACACC 6662 28 100.0 33 ............................ CGTCTGGCAGGGCCGGGAGGCGTCGGCCCACTA 6723 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================== ================== 8 28 100.0 33 GTGCTCCCCGCGCGAGCGGGGATGGTCC # Left flank : CGACCGATGCCATGACCTGCGGGTTCACAGTCCCGGAAGGGCCGGTTCTTGTGATTCGACCCTGCCCCCTGTGTCCTGCTCAGGGCGCGTTGTATTTGTGCCGTGCTGATGAGCGCGGCAGATGGTGGCGTCGACCGAGACGTTCCAGTCGATCTTTCCGGCTGCGTCGGCATCGGCCAGGATCACGTGCAGGATGCGATCCCAGGTCCCGTCCCGGGCGTAGCGGGCGTGACGCTTCCACACGGTCTGCCACGCACCGAACTCCTCGCGAGGTAGGTCCCGCCAGGGAATACCTGCTCGGTAGCGGTAGATGATCCCCTCGACGACTTTGCGATTGTCGCGAAACGGATGCCCCTGCCGCCCTTCATTGGAGGGCAGCAGGGGCTCTATCCGCTCCCACTGCTCGTCGGTGAACTGGCGAAATCGTGACTTCGTCTGCCCCATACGGCCACGGTCTCGCGGGTCACCGCTCAGCTATGGGAGACACGCCCTAGTCGCCG # Right flank : CGCCCCTGTTCGGTGGCACACATGTCAAGGGCCAGTGAGTTCTGCCCAGGGGCGGTCTTGAGACCTGCCCGGTGACGGTCACCAGATCTGCCCGGAGATGGCCATGGGATCTGCCCAGGGGCTGGCCATCTCGGGTCCTCGGGTTGTCAGGCCAAGGGCTTCACCCCCTGGCCTGCGAGTGCTTGGGAGAGGCGGACGGAGTCGCCGCTGGTCTGGCAGACGTGGGCGTGGTGCAGGAGCCGGTCCACTGTCGCGGTGGCGATGGTCTTGGGCATGAGTTCGTCGAAGCCGGCCGGGTGCAGGTTCGAGCTGATCGCGATGGCTCGTTTTTCGTAGGCGGCGTCCACCAGGCGGTAAAGCCCTTCAGCGGCGTCGGTGGCCACCGGCAGCAGTCCGATGTCGTCGACGATGATCAGGTCGGCGCGCAGGATCTTGGCGATGGCCTTGGTGACGGTGTCGTCGGCGCGGTGACTGCGCAGGAGAACGCCGAGGTCTTCCAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCGAGCGGGGATGGTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCGAGCGGGGATGGTCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [31.7-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 9440-11002 **** Predicted by CRISPRDetect 2.4 *** >NZ_UNRI01000006.1 Dietzia sp. Alg238-R159, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ===================================================== ================== 9440 28 100.0 33 ............................ CCGCGCCGCCACCGCCGCCGAGGCCCGCACCGC 9501 28 100.0 33 ............................ CCGCCGATGCGTCAACCCCGAGCACCTGCGGGT 9562 28 100.0 33 ............................ CGGCCTCGGCGGCGTTGCGGGCGTCGCGCTCCT 9623 28 100.0 33 ............................ CGCCCCGAGCTCGCCCTTGATGAGGTCAGCGAT 9684 28 100.0 53 ............................ CAGGGGTGTGCGGCGGTGGGCCAGGTCCGCCACTGGGTGTTCGAGGACATCGT 9765 28 100.0 34 ............................ CAATGTGCGGTGGCATCGGGGCGACCTGGCGGCG 9827 28 100.0 33 ............................ CCCGGCGAACACCTTCGACGGGAACGCGATACC 9888 28 100.0 33 ............................ GTCCGCCGCCGCGACGATGACCGGACCGAACAC 9949 28 100.0 33 ............................ CTTGTTCGTCGGCGGCACTATCGACCACACCCT 10010 28 100.0 34 ............................ CCGGTCGGTCAGGTCCAGTTGGCCGTCGATGAAC 10072 28 100.0 33 ............................ CGCCTCACGGAACCGCCACGGCCCCGACACCCG 10133 28 100.0 33 ............................ CGGGCCAGCCTAGAGGTACTGGACGACGGGCAG 10194 28 100.0 33 ............................ CACGACCCGCGTCTCCTTGACGATCGGGATCGA 10255 28 96.4 33 ..........................T. CTTTACGCCACCTATGCCCCAGTGGATTGATCG 10316 28 100.0 34 ............................ GGACGAGCAAACATCACCGGTCTCCCCCGTACGC 10378 28 96.4 33 .........T.................. GTGTTCATCTCCTCGGGTGCGGACACGTTCTCC 10439 28 100.0 33 ............................ CCCGCGGCGGCTGGTCTGCCTGCGGTCCGGAGT 10500 28 96.4 33 ...T........................ CAGACGGGCCTGCCGACCGATCTGCACGTAGCG 10561 28 100.0 33 ............................ CTGCGGCTGGTCCGCGAAGACCTCGCCGGTCTC 10622 28 100.0 33 ............................ CCGCCACCACCTGACCACCTCGACAGGCTCGGG 10683 28 100.0 32 ............................ CAGCTGGATCTTCACCCCGCTTACCTGCTCGC 10743 28 100.0 21 ............................ CGCCGACGCGACAGGGGTAGC Deletion [10792] 10792 28 100.0 33 ............................ CCGCGCGGGACGTGCCCACAGGGTGCCGTCCAT 10853 28 96.4 33 ..T......................... GACGGCGGACGTGGCGATCGCGGTGCGGCCGTG 10914 28 100.0 33 ............................ CGAGGACTGTCGTACCTGCGGGGCACAATTCGA 10975 28 85.7 0 ..AG....................A.T. | ========== ====== ====== ====== ============================ ===================================================== ================== 26 28 98.9 33 GTGCTCCCCGCGCGAGCGGGGATGGTCC # Left flank : GACGCGTGGTGCGCTCCGAGCCGGTGAACCCCACCGCGAGCGGCTTGTCGTGGACCACGTCCGCGCGGATCTTGCCGCCGGAGCGCTCCACCCATTCCTCGACCTTCGGCATGAACTCGTCCATCAACTGCGGACGGGCCGCCGGCTTGTCGGTCAACCGGCCCGCATCACGAGCAGTCACATAGCGGGCAACGGTGTGGTGCGAGACCCCGGCGAGCTCGCCGGCATCCCGATACGACCCTGTCAGATCAAACGCTTCGAGAATTTCCATGATCTCCTCGGCAGACTTCATGTTGTCCCTCCTCGGGGCGATGGGCGCTTCAGCACCGCTATCGCACCCGAGGAGGGGCCCCGAACCGCCCAAGCGGGCCGGGAAACAATGTCGTGTCGGGCAGATCCCATGACCGCCAGCGGGCAACTCTCACGTCCGCCAGCGGGCACCTTCGTGACCGCCTACGGGCAGTCTCTCGTGTCCGTCGTCACACACATCAGGTGGCGAC # Right flank : CTACCTCGGCTTGCAGTACACGGCTGGCGCCGCTGTGATCCCTTTGCGAGCGCGAGGGATCGGCAGTGATCGAGTTCTACTGGAATTAGCCAACGTGTTTGCAGCAACGCTATTCCTGCCTTGTAGGGCTGGCAACCTACCCGCGCGGCGCGCGTAACCAGAGTGCGTCGACAGCGGGACCGTCTACGCGGCGATCCCAGACGCCACCGCGTTCCTCGACCGCGTCATGAGGTGATCGCGGGGCCGGCGGCCGCGCGGCCAGGGCGTGGGACTGGGGTCGGGCCGGGTGTGGGGCCGGGGTGGCCAGTCGGTCATCGCCTCCCCCATCTACACCGACCGTCCATATGTGGCACTTCATAAATGCTGGCCAGCGGCATCGTGGCCGGGCACGGCAATGTGACCACCGTCATAATTGTTACCGACTTGTCACCCAGCGCGATTTCAGGTTAGAGTTTCGCCATCGCCGCGCGGGGATGTTTCAGGGACTCCCCGCGCGGCTG # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:-0.04, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCGAGCGGGGATGGTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCGAGCGGGGATGGTCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 110068-114371 **** Predicted by CRISPRDetect 2.4 *** >NZ_UNRI01000009.1 Dietzia sp. Alg238-R159, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 110068 28 100.0 33 ............................ CTTGATCGGCCGGGCGGTGATGCCCTTGATCCG 110129 28 100.0 33 ............................ CACGGTCGCGACGGGGGGCGGGCACTTGACCCA 110190 28 100.0 33 ............................ CTGCCCGTACCCTTGCGCCCCCGCCGTGGACAC 110251 28 100.0 33 ............................ GTCGCCGGCGTCATCGACACCGGCATAGGGACG 110312 28 100.0 33 ............................ CGCCTCGCAGGACCTGGCGGTTGCACAGACCGA 110373 28 100.0 33 ............................ CGCGGGCTTGAGCAGGTTCAGTACCGCAGACGA 110434 28 100.0 33 ............................ CTGGATCTCCATCTCCTCGTCCCCGTTGTCTTT 110495 28 100.0 33 ............................ CCGCGACGACACCACACAATGCGGGCTGGAGTC 110556 28 100.0 33 ............................ CGTACCCACCACACCGAGCGCCGCCTTAAGCGC 110617 28 100.0 33 ............................ CGTCCCGGCCGGGTGTGTACCCGGGCAGCACGC 110678 28 100.0 33 ............................ GTCCAACGGATTGTCCGGCATCGTGAACAGCGA 110739 28 100.0 34 ............................ GGATTCGCCAGGCTTGGGGTGGTGGGCGTTCAGG 110801 28 100.0 33 ............................ CGTCGCCCCGGTGCGTGGGGACTGGCTCGGTAC 110862 28 100.0 33 ............................ CGGCTACGCGACCTCGGCTATCAGCAGATCACT 110923 28 100.0 33 ............................ CATCTTTTTCGACATCGCCATCAGCCGGACACC 110984 28 100.0 33 ............................ GGAGACGCCCCATGGCATTGGTGACTGGCACGG 111045 28 100.0 33 ............................ CCCACTGCACGATTCGCCCGGATCGCCCGGCCT 111106 28 100.0 33 ............................ CGGGTTGACGGTGATGGGCGCGTACCCGGTGAC 111167 28 100.0 33 ............................ CACTTACATCCATCCCACTCGCAGTGGGGGCGT 111228 28 100.0 33 ............................ CTGCGGCTGGTCCGCGAAGACCTCGCCGGTCTC 111289 28 100.0 34 ............................ CGACCGCTTCGACCTGCTGGGGACCTCCGCGTAC 111351 28 100.0 33 ............................ CCCGGCCCACACGGTCATGGTGCCGCTCGTGCC 111412 28 100.0 33 ............................ CGCCCCGTGAATGTCCACGATCCGCGACACAAC 111473 28 100.0 33 ............................ GTCCGCCGCCGCGACGATGACCGGACCGAACAC 111534 28 100.0 33 ............................ ACCGCCCGGGTCATGTCCTCGAAGGCGTCCAAC 111595 28 100.0 33 ............................ TCGGTTCCGTTCACTCCCCCTGTTGAGCCGGAA 111656 28 100.0 33 ............................ CTCGTCAACGATTTCGATACCGCTTGGCACGCT 111717 28 100.0 33 ............................ CGACTGCCACGACGACCTACCGATATTACCAAC 111778 28 100.0 33 ............................ GGACACAGGCTCGGTAGCCAACTACCCGGCCCC 111839 28 100.0 33 ............................ CACCAGGAACGTGCCCGAAGTGAGACGTACCAC 111900 28 100.0 33 ............................ CGTCTTCACATCACAGGCCCCCTGGATCTGCGC 111961 28 100.0 34 ............................ CCGCGAGGGCCTCATCGTCGGCATCGTCCGCGCC 112023 28 100.0 33 ............................ CTCATCGCGCCCCCATGTAGGTCTGTGCGTGCT 112084 28 100.0 33 ............................ CCGGGTTATGTCTCAGGCGGTCACCGAGGCGGG 112145 28 100.0 33 ............................ GGAGCGGGCGGGCGACGAGCACACGCGCAGCGA 112206 28 100.0 33 ............................ CTCACTGGACTGGATCCCGGTCAGCTCGCCCTC 112267 28 100.0 33 ............................ CGTTGATGACGCGAGGTCACCGGCAAGCTGGAT 112328 28 100.0 33 ............................ CGACGCCTGCCTCGATCCCACTGAGGCGGGCCT 112389 28 100.0 33 ............................ CTCGGGCCGCATGATCGCCTCGCCGCCAGACAG 112450 28 100.0 33 ............................ CATCCGGGCCGAACTGGCGCGGAGCGGCACCTC 112511 28 100.0 33 ............................ GGCCGCCCGGTTCATTCACCGCCAGGTGTTGGA 112572 28 100.0 33 ............................ CTCGGGGGTTTGATGTTGCGGTGGGTGGAGGTC 112633 28 100.0 33 ............................ CTGCCCGTACCCTTGCGCTCCGGCCGTCGAGAC 112694 28 100.0 33 ............................ CGCCACCCCGGGTCGAGACCTCGTACCAGCCTT 112755 28 100.0 33 ............................ CGATGCGGCCGTCCTGGGGTTGATCTCGGAGGG 112816 28 100.0 33 ............................ CACGTACCCGTCGGCGGCGCGGATTCGCCATGC 112877 28 100.0 33 ............................ CGGGGCGCAGCCCATTGACATTACGGAGCATTT 112938 28 100.0 33 ............................ GTCGGTGAGGGTGTCGTAGACCGGGGCGGTCAT 112999 28 100.0 33 ............................ CGAGTCGTCCCTCGGCATCGAGGTGTCCAACTC 113060 28 100.0 33 ............................ TCCACCCATGCGGTATAGCGGGCGACCGCCGCA 113121 28 100.0 33 ............................ CGACTTCTACGCGCCCAGGACGGCGCAGCAGAT 113182 28 100.0 33 ............................ CCGAAGGTCGTTCTCCTGGGTGGGTGACTCGGC 113243 28 100.0 33 ............................ CTCGGGCACCTCGGTGTCGTCGTGGACCCGCTG 113304 28 100.0 33 ............................ CAGGTCCTTGATCGCCTCCCAGTTGTCCCCGAA 113365 28 100.0 33 ............................ CGTGTCGTCGCGCATCTGCATGAGGCCCTTGGT 113426 28 100.0 33 ............................ CGATGGACTACCAGCGGCTAGGTTCCGAAGAGA 113487 28 100.0 33 ............................ CCCCGCGGTGGCGGTGATCGACCTGGCCCAGGG 113548 28 100.0 33 ............................ CAATTCCCGCCTCGTCGTCGTCGACGCGATACT 113609 28 100.0 34 ............................ GTTGCGTCCTCGGCTTCGTCGAACCCACCTGCGA 113671 28 100.0 33 ............................ CGCCTCGCCCTTCTTCCGCAACGCCTCATCACG 113732 28 100.0 33 ............................ CGCCGGGTTGACCCCGGCGAGGATGTTGCCGTC 113793 28 100.0 33 ............................ CAGCATCCCGGCCCGCACGACACGCTCGAGTAC 113854 28 100.0 33 ............................ TGTCCAGCCCCTGCTCGGCCGCAGCGCGTGTCA 113915 28 100.0 33 ............................ CGATCCCGCCGGCGCCCCACTCATCACGGCGTC 113976 28 100.0 33 ............................ CTCAACCAGCGGACGATGCAACCCGAGGACCGG 114037 28 100.0 34 ............................ CCGTCACCGAGACCACCGACTCGCCGGTACCGAT 114099 28 100.0 33 ............................ CACTTCACCGTCCCGGCCCGTCAGCTCGTCGAT 114160 28 100.0 33 ............................ CGGTTGCTCGTCTTCGCCGTGTATGTAGAGGGT 114221 28 100.0 34 ............................ CACGGGCGCTCACACCATCAGCGAGACGCCGGAG 114283 28 100.0 33 ............................ CCGTGGGGCCAAGGCCGCGAAGGGTGCCCGGTG 114344 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================== ================== 71 28 100.0 33 GTGCTCCCCGCGCGAGCGGGGATGGTCC # Left flank : CCTCACCAGTTGTCCGGCGAAACTCCGCGGACAACTTACCCGCTGGCTGCTTGAGATCAGCGCCGGAGTCTACGTCGGCCACGTTCCGGCTCGAGTACGGGACCTACTATGGAGCCAGATCGTCGAGTACGTGAAGGACGGCAAGGCGATCATGGTGCACAATTCTGACGGGGAACAGCGGCTTACATTCAAGACTCACCGTCACGAATGGGAGCCCGTCGATCTCGACGGCATCACCCTGATCCGTCGTCCAACCAACAACGAAACCACCCGTGGACGAGTTCGCAAGGGCTGGAGCACGGCTGCGCAGCGTCGACGCAGACGTTACTGAAGTGATCGGCCGCTAGGAGCCGCGAGATACTAGCGCTCCCGATTAGTAGCCTTGTACAAGTCAGTTCTTCGGCCGAGTGCTGCGCCATTTCTCCGTCCGACCCCAGCCACTCCTGTCATAAGTCATGGAAGAGTGCCTTAGTCGCTTGTAAGATGGCTGGTCAGCAAGC # Right flank : CGACCGGCGGCTCAGGTCGTCCACCTAGGGTGTGTCTCCCAATCGGCGTAGCCAGGTGAGAATTGCGCAGAGGGTGACGGCGGCGCGGTAAGTGATCGCGAGTTTGTCGTAGCGGGTGGCCAGCGCTCGCCATTGCTTGGCCAGTGCGAAGGAACGCTCGACGACGTTTCGGTCTTTGTAGAGGTCAGTGTCGAGTTTCGGGGGTCGGCCACCGCGGCTGCCGCGGCGTTCGCGAGCGGCGATGGTGTCGCTTTTCTCTGGGATGACAGCGGCGATACCGCGACTGCGGAGCTGGCGTCGGATCGTGCCAGACGAGTAGGCCTTGTC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCGAGCGGGGATGGTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCGAGCGGGGATGGTCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //