Array 1 4412-5906 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACBWZ010000018.1 Streptomyces sp. WELS2 18, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ============================ ================== 4412 33 93.9 28 ..............................TC. TCCTCGACGTCGGCCGCAAGGGTGGGAC 4473 33 100.0 28 ................................. GCGCTCAGCCCTTGCCGTGGACGACGAG 4534 33 97.0 28 ..............................A.. CCGGATGGCACACCACGGAGGCCTGGAC 4595 33 87.9 28 .............................GTCA CGACCCCGGTCAGGACCATCGCGCACTG 4656 33 90.9 28 .............................TG.T TCTCGCCGGGGCTGGTGGGCTGCCAGCT 4717 33 90.9 28 .............................TT.T CCCAGCCCTTGCCGTGGGGCCACTTGGC 4778 33 90.9 28 ..............................ACA GTTCGCAGGGCAAGGTCTACAAGGACAT 4839 33 97.0 28 .............................T... CACTGGCCTGCCGGTAGGAGCGGGGCGG 4900 33 93.9 28 ...............................CC GCCCGACGGGATGTTCATGGTCGGCTGC 4961 33 90.9 28 .........A....................A.C TCGCCATGTTCGGCAAGGGGTTCGCCGC 5022 33 90.9 28 ..............................TCT CCCAGGGGTCCTCGTTCTCCCAGGCCTC 5083 33 93.9 28 ...............................TC GCCGCGTAGGCGCCGGTTGTGTTCGGCC 5144 33 90.9 28 .............................T.AC AGTGACGCGGTACCGACCGCTGGCCATG 5205 33 90.9 28 .............................ATC. CCCAGAACCTGGCGCCCTACGAGGACGC 5266 33 97.0 28 ...............................T. CCCAGTGGGCCACGTCGCCGTTCATGAC 5327 33 93.9 28 ...............................CT GCCAGCGTGGGCGCCGAGGGGCCCGGCA 5388 33 90.9 28 .............................TAC. AGCCGTTCCCGGGCCGGGGTTTCTTCCA 5449 33 97.0 28 ..............................G.. GCTGGTCCCTGGCAGATGGGTCGGACCA 5510 33 90.9 28 .............................T.CC GGAGGATGATCGCGACCTCCCAGACCTC 5571 33 90.9 28 .............................AGC. GGGAGCAGGAGAAGGCGGCCCGGCGCGG 5632 33 90.9 28 .............................GA.A TCATCGGCGACGCCATCCGCAACGCCGC 5693 33 84.8 28 .....T........T......A........A.A GGGCGAGCCGAGAACGACTTGCCCGCAC 5754 33 93.9 28 .............................G.C. CTGGGTCGACCCGGACCTGTCCCGTACC 5815 31 87.9 27 ..-..............-.............CC CCGAGGGCTGGCGATGTACGCGGGCGT 5873 33 75.8 0 .......T......G........CGC.T.AA.. | C [5889] ========== ====== ====== ====== ================================= ============================ ================== 25 33 91.8 28 GTCCTCCCCGCCGACGCGGGGGTGTTCCGCCGG # Left flank : CCACCCGAGCGCAGGGGTTCGATATAGCGGGTCGCGGTGACTTCTCTCAGCACTTTCGAAGGCTCCCCACTCGCCGGCCTTGCATTCCATGGTCTCGTCCAAGGCGCCGCAGTCCGTGCATATGTCCACGATGAGGCCTGGGGAGAATCTGGGGAGTTTCGACCGGCACGCTCGTGTCCCCTCCTCCCCAGCAGTCCATCGATCGTGCCGGAGGCTCCTGGCTCCGCCTCAAGGCACGAAGTGAGCATAGTAACCAAGCGTGACAGCCGGGGGCGGACGCCCGAGGCATCACACCGGCGCCACTACGGACCCCTCAGCACGCCCCCCTTGGCACTGGCACCCGTCCGCGTCCGGTACCGCGCTCAACCATTGCCCGCTGCCAGCGCTATCGCCGTTCAGCCCCGGTAGGCTGACATCATGCGGCCCCACCCACCCCGAACCCGCACCTCCTTGAAGGCAAAGAAAAGGCAAAGCCCCTTTTAAATGCCAGGTCAGGAAGG # Right flank : GCGGCCTCCCAGGACTCCAGATGCCCCGGTTCCGGGCGTATGTAAGGAATCATCGTTTGAACGCGATGCGGGGCAGCATCGGGCCTCACGGGCTGCCCAAACATCCGTCAGCCCGTATCAATCACTCCGCGTGTCCACCGCATTGACGGGCCGGCGTCACGTTGCCGCCGGGAGCTGTTCTCGGCGACGGCTTCCCTGCGGAGAATCTGGGAAGTGACGACTGACTCACTCGTGTCCGTCTCTCCCCAACAGCCTGTCGATGGCCGTGCGCCCCTTGATACCTGCCTCCGGCATGAAGTGAGCATAGTAACGAAGGGTGATAGCCGGAGAGGAATGCCCGAGCCATCGCGCCAGCGTCACCACGGACTCCCCCGCCTCCAACATGATCGAGGCGTAGGTGTGCCGCAGCACGTGGAAGCCGTCCTTCGGCGCCGCCGCCCACTGCCACTGCTTCGCCCCCTGGGGGCGCGGCGGAATGATGCCGGCCTTGGCCAGCGCGG # Questionable array : NO Score: 3.43 # Score Detail : 1:0, 2:3, 3:0, 4:0.59, 5:-1.5, 6:0.25, 7:0.01, 8:1, 9:0.08, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCGCCGACGCGGGGGTGTTCCGCCGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCCTCCCCGCCGACGCGGGGGTGTTCCGTGCT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.60,-13.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 11224-10281 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACBWZ010000018.1 Streptomyces sp. WELS2 18, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ============================= ================== 11223 33 90.9 28 .............................CAT. GGCACCTTGTCGCGGGAGTGGCCCATGG 11162 33 90.9 28 .............................CAA. GCGGCCCCAGCGGTTGCGCGACCGCTGA 11101 33 93.9 28 ...............................GA CTGAGCGGTTGCTCGGTCCGAGCGCCCA 11040 33 90.9 28 .............................CTG. AGGCGACGGGACTGCCCGCGCTGCACCC 10979 33 97.0 28 ...............................G. CATCCGCCTCGCCCAAGCTGCGGCCGAC 10918 33 100.0 28 ................................. GCGAGCTGCCTTTGAGGATGGCGTCGTA 10857 33 90.9 28 ..............................TGA CCGTGGCGCCGAAGGCATCGAGGAGCAC 10796 33 100.0 28 ................................. GAGGGCCTGTCCCGCATCCGAAGCCCGG 10735 33 90.9 28 .............................AA.C CTCTGGTCATCACCGGGGCCGACCGACT 10674 33 93.9 28 .............................A..T CACGGCGCTTCTCTGCAGCCGTCAGCTC 10613 33 90.9 28 ..............................TGT CGCGGGACACCGGCGAGGTGCGCGTCCC 10552 33 93.9 28 .............................A.G. GCGAGGTCGAACTGGGCCCGGCCGCCGT 10491 33 87.9 28 ......................C.....A..GC ACGGCCCGACCAGCGGACGCCCCGTCGG 10430 33 84.8 29 ..............T...........T.ATA.. ACGCGGTGACGCGCGAGGAACTGCTGGGC 10368 33 81.8 22 .............GG.......C..GA...T.. TGTAGATCACTGGCACGGCGGA Deletion [10314] 10313 32 66.7 0 ..TT....-....GT..A.........G.CGTT | C [10289] ========== ====== ====== ====== ================================= ============================= ================== 16 33 90.3 28 GTCCTCCCCGCCGACGCGGGGGTGTTCCGGCCG # Left flank : CGATGTCCAGTCCCTGCTGACCCCACCCCACACCCACACCGCAGCAACCGACGACGACACCGACGAAGAAACCTCCGAACGGCATGACGTACGCATGGTCCACCTCTGGGACCCCAAAACCGGAGTCCTCCCAGCAGGCGTCAACTACGCCAACGGAGGCCACTGATGCCTTCCATGGTGGTCATCGCCACCACCGTGGTCCCCACCCACCTACGCGGCGCCCTCAGTCGATGGACCAGCGAAGTAGTCCCCGGCATCTTCGTCGGCAGCGTCTCGGCTCGCGTCCGCGACGAACTCTGGCACGCCGTCACGCAAGTTGTCGGTGACGGCGCTGCCATCCTCGTTTACCCCGCCGCCACGGAACAGGGCTACGCCATCCGCACCGCAGGAACCCGCCGCCGGACCCCCGTCGACTTCGACGGCCTCACCCTGATCCGCATGACCGCCGCACCCCAGGTAAAGAAAACGCAAACCCCCTCTTAGTGTGCAGGTCAGAAAGG # Right flank : CGAGGAGTAGTGCGGCGCCGCCTCGAATGTGTGCCTCCGGTATGCGGCAGGAAAGGCACGCGGCTCCGGAGGCCGTCGCTGTTGTCTGGCTGCAATGGCGGTCTACCCGCGGTCGATCTGCGACGGGGCGGGCCTCGCCCTTCTTCGCGCGAATGGGCGGGGCGCGCACGCAAGCCCGCGTTCAGTCGGGGGTGTCGGCCTCGTGTGACTTGGCGAGCAGGTTACGGTGCAGCAGCTCGAAGATGCCTTCCTCGTGTGCCACTGAGTCAACCCGCACCACCAGGTCCGTCCGGGTCCGAACTATATTGCCTCTGGGCACAGTTGTTAGCGGACACCGTCATCGACCGTCTGCAGGAAGCCTTGCGGGTGCAACCGGTCATCCACCTGTTTCGACCGGGATGCCTTCTGCGGCCGGCGCGGCAGCAATGTTTCGATTAATGCCCGAAGGCCATCGGCCGCATCCGCGGTCGAACGCCCGCACCCTCCTCAACGGCCTCATC # Questionable array : NO Score: 4.94 # Score Detail : 1:0, 2:3, 3:0, 4:0.51, 5:0, 6:0.25, 7:-0.03, 8:1, 9:0.21, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCGCCGACGCGGGGGTGTTCCGGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCCTCCCCGCCGACGCGGGGGTGTTCCGTGCT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.20,-12.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [18-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [35.0-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,4.91 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 21036-22162 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACBWZ010000018.1 Streptomyces sp. WELS2 18, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ============================= ================== 21036 32 78.8 27 ........T.-......C......C....TC.C CTGACCGGCTGAGGCCGCCCTGCTGGC 21095 33 81.8 28 ......T.................AG...TG.G TGGACGCGGACGGCAAGGTGATGCACGG CG [21106] 21158 33 87.9 26 .......T.A....................C.G CTCAGAGCGGTGTAGAGCGGGTCCTC AA [21187] 21219 33 93.9 26 ..............................CG. GGGATGGGTTCGGGGTAGACGCCGGG TA [21248] 21280 32 93.9 29 .............................-..G CCCCACCAGCCCGCCGACTCGGCCCGGTG 21341 33 100.0 28 ................................. TGCGGTTCAACGCGGCCAAGCTGGGCGG 21402 33 84.8 28 ..T..........................ACAG GCAGTTGGATGTCGTCGTCCGGATCCGA 21463 33 93.9 28 ...................A..........G.. CGCCGTACTGCTCGGCGTGCGAGCGGGC 21524 33 90.9 28 .............................C.GC GGCGGGTGGCGCTCTGCATCTCGCCGAG 21585 33 100.0 28 ................................. CCCGGGAGATCGGCGAGGCGGTGCTCGG 21646 33 87.9 28 .............................CCTG GTCAGGTGTGGCTCGTCAACCACCCGTC 21707 33 93.9 28 .............................A..G CCGGTCATCTGGCCGTCCTGAGTCTGGA 21768 33 90.9 28 .............................CCG. TCGATCTCGGGAACGATGGTCTGCACGT 21829 33 93.9 28 .............................C..T TCTGGGGCATCACCACGGCCGGGGCCAC 21890 33 87.9 28 .............................CCGG AGGCTCTGAAATCGCCCCGCAGGATCTG 21951 33 84.8 28 .....T.......................TGAG GCGCGGTCATCGGTGCCGCTGCGTACGG 22012 33 93.9 28 .............................T.G. AGACCCCGAACGCCGGGACTCCAGCACC 22073 32 84.8 27 ........T........-...........CC.C CCGAGGGCTGGCGATGTACGCGGGCGT 22132 31 72.7 0 .G............G..C....GTCG..--... | ========== ====== ====== ====== ================================= ============================= ================== 19 33 89.3 28 GTCCTCCCCGCCGACGCGGGGGTGTTCCGGTCA # Left flank : GGATCCAGTGCAGGTGTGCCTTCGTCCCGCTGTACCTATTCGAAGGCCGGTGCCGGCGGGGTAATTTCCTCAACCACTGCTACACCAACGGGTTTCCGCCGTAGAGTACATACCGCTGCACGCCTCCCTGGGAGGTGCGCGGAACCTCATTGGCTCACCAGGCAACGGCAACGCCGAGAAGAACGCACGACCCTCTCGAGGGATGTGGCGCAACCTCGGCTCTGTCTGCGCTCTGGAGATACAGTGTCCCGGTTCCTGCACAAGTTCGCCCTGCGTCGCAAGGTTCTTCTCGAAGCCTCACGCGTAGTGGTCAGCGCGGTGATCCGTGCCCTGATCAGCGAACTCGTCAGCTGGCTCATCTGAGCCAACGGTGACGGATCCCAGGGGTCCGTCACCTCTTGTTTCAAGACGATCGCCGCTGGCTGAACACGTTCCGCGCAGCGGGATACCCAGCAGGACGAGACGTCCGGCTACAAAAGGGAGCCGACCCGCGCGTTCGG # Right flank : AAGGCGGCCTCCCAGGACTCCAGGTTCCCCGGTTCCGGGCGTATGCAAGGAATCATCGTTTGAACGCGATGCGGGGCAGCATCGGGCCCCACGGGCTGCCCAAACATCCGTCAGCCCGTATCAATGAGCGTTTTCAGCGCTGACGCTCCAGGGTGAGGATGGCCGCGGCGATTGACGACAGGCGGTTCTGTCCCCGTCGGCCGGGGAGCATGCCCGCGCGAGGCGGCCCGCGTGATCGTTCAGACTCCCGGATCGGTTTCGACCGGACCCGGGCGCCGGGCACGCACCGCTTCCAGCTGGGCGGCGAAGGACAGCCCCAGGAAGAGCGCGACGGAGGTCAGATAGGCCCACAGCAGCAGGGACATGAAGGCGCTCAGGGGACCGTAGACGGCGTCGAACGAACCGCTGACGTCGAGATAGAGACTCAGCAGCCAGGTCAGTGTCGTCCACAGCACCAGGTACACCGCGGCACCGAAGGCGAGCCATGTGTAGCCGGGCTG # Questionable array : NO Score: 4.85 # Score Detail : 1:0, 2:3, 3:0, 4:0.46, 5:0, 6:0.25, 7:-0.03, 8:1, 9:0.17, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCGCCGACGCGGGGGTGTTCCGGTCA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCCTCCCCGCCGACGCGGGGGTGTTCCGTGCT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.60,-13.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [11-11] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [31.7-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //