Array 1 32081-31125 **** Predicted by CRISPRDetect 2.4 *** >NZ_NBFC01000022.1 Streptococcus mutans strain PKUSS-3 C723, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 32080 36 100.0 30 .................................... ATAAAGAGGAATATAAAAGCCCAAACACTT 32014 36 100.0 30 .................................... TAAAATCACAGGCTTTGGTGATGCGCTGCA 31948 36 100.0 30 .................................... TCGAACCCTGATGCGCGCCTCTCGCCTTGC 31882 36 100.0 30 .................................... TTTTGCTAAGAATGCAAAAAGCAAAACGGA 31816 36 100.0 30 .................................... CGAGAGCTTGAGCCATGCTATTAAGCTCGA 31750 36 100.0 30 .................................... TTTTACACAATCAACATCTTCAAGTAATTC 31684 36 100.0 30 .................................... ATAACTAGAATACCGTTTAAACGCAAATTA 31618 36 100.0 29 .................................... TCTTTCTTGCTTTCTTTATCAATTCCGCG 31553 36 100.0 30 .................................... TCTATACACTGCTGATGAAATGCAGCAGAA 31487 36 100.0 30 .................................... TCGTCAAAGAACCAGAAATAACAGAAGAGC 31421 36 100.0 28 .................................... CTAGCAATTTTATCAATAATTGCACTCA 31357 36 100.0 30 .................................... CTGTGTGGTCGATATTCCCATCAATCGATG 31291 36 100.0 30 .................................... ATCTTTTAATTCATACGAACCAACTACCTG 31225 36 100.0 29 .................................... TATTATCCTATTTTTAGAGTTTATCCTTT 31160 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 15 36 100.0 30 GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Left flank : AATGGTTCCAAAACTTATATAATATATATGTAAGATAAAGAGA # Right flank : AATAGAATCAAATTCTCCTAAGTCAGTTAAGTTTTAGAGCCATGTTAGTTACTGATTTACTAAAATGCATTATGCGAAAGATTTTTAAATAAGCAAAAGACACTTGAAGCAATAATTCAAGTGTCTTTTATGGGACTTTCTTTAATTTTTAGGTAATGACCGTTCCGATGACTTCAATTGTATCATCTTCTTTTAAAATGATATCATCATAATCTGGATTTAATGAGATGAGTCGAATTTCTTTGTTTTTTCGGTAGAGTTTTTTGACATATGCCTCATTATTTACAATAACAACGATAATTTGTCCGTGATGGATAGCTTTAGTCTTTTTAACAAAAATAACGTCACCGTTGTAAAATAAAGGTTCCATACTATTACCATTGACAGTAAGAGCAATATCATGTTCTGGAATTGGTATTGGGTATTTAATGGTTTCTTGTTTTTCATGTCCAACCCAGATACCAGTACCAGCTGAAACTTCACCATAAATCTGAATGTTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [70.0-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.87 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], // Array 1 102818-103447 **** Predicted by CRISPRDetect 2.4 *** >NZ_NBFC01000005.1 Streptococcus mutans strain PKUSS-3 C757, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 102818 36 100.0 30 .................................... TAACTCTTTGCCGTACGCTGTTAAATATTT 102884 36 100.0 30 .................................... CATCTCTAGTCGTATTATCTATTGTGACTG 102950 36 100.0 30 .................................... TTTAGTCTGTGACTATGAAGACTCCGCAAG 103016 36 100.0 30 .................................... GGCACCTTGAGAGCGAAACTTTGCACAATG 103082 36 100.0 30 .................................... GTACTTGGATAGCTGCATACCCAAATTATG 103148 36 100.0 30 .................................... AAGACGATAATCTTGAGTGGTGAGAAAGTG 103214 36 100.0 30 .................................... CGATTGCTTTTCCAATATTGAATGCAAAAT 103280 36 100.0 30 .................................... TTGAGCAAGGAACTTCGCCAGATGACTTCT 103346 36 100.0 30 .................................... ACAAACAAATCAGAACTTATGAAAGCAGCA 103412 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 10 36 100.0 30 GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Left flank : AGGAAGAGGAAGGATATTGGGTTGAATTTCCTGAATTTGGCGGTGGTACGCAAGGGGAAGATTTGGAAGAAGCCATGAAGAACGCTCGTCAGATGTTAGAAAGTGTATTGGCCTCCTATCTAGATGAGGGAATGAAACTGCCTAATCCAAGTGAGATAAGGAAACTATCTGTTGAAGATGGCTTTGCAACTATGATTCAAGCAGATCCTAATCCTTATCTCAAAAATAACAAAGCTATTCGAAAGAATGTTACCGTACCTGAGTGGCTAGTACAATTAGCAGATCGTGATCAAGTGAATTATTCTGAAGTATTAACAAAAGCTTTGGAAAGGAAACTACAATTATAAAACAAGAAAAGCGCTAGAAAGATTGATTTCTAGCGCTTTTTTAGGTATAATATAATTAATTAAAATCTTTTAAAAAGGAATTATTTGAAGCTGAATTCTAGCTGAGATAAATGGCGCGATTACGAAATGTCGTGACGAAAATTGGTCCACAAG # Right flank : TTATATAATATATATGTAAGATAAAGAGAGGTTTTAGAGCTGTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [58.3-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //