Array 1 117520-118128 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT891956.1 Selenomonas felix strain Marseille-P3560, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 117520 37 100.0 35 ..................................... TATAAGCAAAAGTGTGTTCGCCACTGAAAATTCGC 117592 37 100.0 35 ..................................... AACGGAGGCTGGCAAAATAGGTGGTGTTCATAAGA 117664 37 100.0 34 ..................................... CTCACCCCGATGGTGTGAACATACTTGAATATCG 117735 37 100.0 34 ..................................... CTCACCCCGATGGTGTGAACATACTTGAATATCG 117806 37 100.0 33 ..................................... GCCACCATCCTGCTGCAACAATCGCGGCAATGC 117876 37 100.0 33 ..................................... GCCACCATCCTGCTGCAACAATCGCGGCAATGC 117946 37 100.0 34 ..................................... TCGGAAATTGGAACGCCGTCGATTTCCTCGACAA 118017 37 94.6 38 ...T.G............................... GGAAGATCACGAACCTCATGGTTTCCACAAGAGATGAC 118092 37 89.2 0 ...T.G............................C.G | ========== ====== ====== ====== ===================================== ====================================== ================== 9 37 98.2 35 GTCCCAACACACACAATGCTGCGTGCGGCATTGAAAC # Left flank : CTCTGATTCTCATGACGTGCAAACGCCGTAACCTCATGTCCGCGTGCCACAAGCTCCTCAATAATCGCACGGCTCGCCTTTCCATTGGATGCCACAACTGCAATTTTCATCATAAATTCCTCTATTTGATTTATATTTTGTAATTTCTTTGATTACACCAGCAATATAACACAGATAAAATAGAATTTTAATAGGTACAATATATTTTTTACCGACCTCTCTGCATCGACGCAAAAACGTCATTGAAAAAGAACGAAGCGTGTGCTATCTTAAGATAAGAAGAGAAGGAAATGGAAAGTGCTCCGGCACGGGCGCAAAGCCGCATTCCGCCGTTTCGTCTTTCCAAAACGGTGCAGCCCGCACCGCACAAGGGACAGCGCCGATGGATCCCCCACTTTTCGGGGCAGAGTTCATCCGCAGACGCCAAAAACGGCGCAAAAAAGCGCGTCTTTCTAAAATGCCTTCTCAGCCCGCGCGGGACAAGGGCTGCGGGACACAGT # Right flank : GCAAAACGGCTCTGCGTGTCCTTTCGGTCACACAGAGCCGTTTTCGTATGCAAAAATCGCACAGCAATCTTAACGATGCGGCGCACAGATGTTAGTATAGAGATACAAAAGGGCACTGCCGATAGACGGCTGCCCCTCATTTTTGGCAGAGAACCCCGCCTACAGTTTGGATGCATGAGGCGGGTTTTCTCTTTTATCGTTTAACCGACATGATCAATACGGTGAACACAACGAGAAATGTAAAGGAAGCACTGATAAATTCGGCACGACCATCTTGACGCATCTTTTTCGCCCGCTTTTCGTTAGCAAATCCTCCACATAGCCCTCGCTATGCGTCCGGTTTGCTGCCTCAATCGGACAAAAAATCTACGCCAATCTGGCATACCTCATTCTATCAGCGATTCCCTAGAAATACCACAGACAAAATAGAATTTCAATAGATACAATATCTTCTTTTGAGAAAACTACACGATCACAGAAACACGTATATGGCATAAATA # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:0, 3:3, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCCAACACACACAATGCTGCGTGCGGCATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [11,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.60,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.64 Confidence: HIGH] # Array family : NA // Array 1 42325-39833 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT891957.1 Selenomonas felix strain Marseille-P3560, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ===================================== ================== 42324 31 100.0 35 ............................... ATTTTCCCTCACCTCCTTTCAGTGCAGAAAGTTGT 42258 31 100.0 36 ............................... GTGTAGAGCTCGTCAAATCCGTTTTCGGGACATAGT 42191 31 100.0 37 ............................... CGAAAGATACATCTCAAATCCACGGGCAAACCGCTGT 42123 31 100.0 36 ............................... TTTTTTGCCTTCTTGAGCCACTCCTTATACCGTTGT 42056 31 100.0 35 ............................... ACTGTATGGACTTGCCACTCAGCAAGCAACGGGGT 41990 31 100.0 35 ............................... CCCGAAATAAGACACAAAGTTAAAGGGCTGGTTGT 41924 31 100.0 35 ............................... CCCGAAATAAGACACAAAGTTAAAGGGCTGGTTGT 41858 31 100.0 36 ............................... ACGGTGTAGCCATCAGGGGCACTCTCGGGCAGCAGT 41791 31 100.0 36 ............................... CATGACCGTAGACAAAAAGCCTCCGCGCAGCTTTGT 41724 31 100.0 36 ............................... ACGAGCACGGCGATTGCCTGCGACACAAACGCGGGT 41657 31 100.0 35 ............................... ATCCGTATCGAGGAGGAATGGAATACGCCCGAGGT 41591 31 100.0 35 ............................... CGATTATGCAGATGATCGACCGCATGAGTTCGGGT 41525 31 100.0 36 ............................... AAAGCGAAATGGATTCACACAAGATCATGGACGCGT 41458 31 100.0 35 ............................... ACCGCCTGCCCCGTTATACGGGCAAGTTAAAGGGT 41392 31 100.0 35 ............................... TTCGCGACGATCTTGGGAAAAATCCACTCAGCAGT 41326 31 100.0 36 ............................... AAAGGTGCAGGGCAGATTCGTCTAAACCGGATGGGT 41259 31 100.0 35 ............................... GCATCCAGCACGACGGGGATCGTATCCTCGACCGT 41193 31 100.0 35 ............................... AAGTTAAAGCTCGCCCGCATCTTGCCGAGAAGGGT 41127 31 100.0 36 ............................... ACGGCTGTCTGCCTCAAGGTACAGAATTTTTTAAGT 41060 31 93.5 36 ........A..C................... ACTGATAACTTAAATCGTTTGTTACGAGAACGCGGT 40993 31 93.5 35 ........A..C................... TTGTCGATAATCCCGCATCGTCCATCAAGGAATGT 40927 31 93.5 35 ........A..C................... TCTTTAACCGCCTGTTCCAAATACAGAATGGAGGT 40861 31 93.5 36 ........A..C................... CGTTATTACGATCACTGGGTGCACGCTGTATGCAGT 40794 31 93.5 36 ........A..C................... CAATACGACGTTGGAAAGAAGCAAGAAAAGGACTGT 40727 31 93.5 36 ........A..C................... AAGTGCCACGATGCGGCTCTGCATGTCGACCATGGT 40660 31 93.5 36 ........A..C................... CAATGACACAGGCACCGTTTACGGACTCGTTCGGGT 40593 31 93.5 36 ........A..C................... ATGAATCACGTCCGCAGCACCATCGCCGCCGGCAGT 40526 31 93.5 35 ........A..C................... TTGTCGATAATCCCGCATCGTCCATCAAGGAATGT 40460 31 93.5 36 ........A..C................... TCTTTAAGGAGGTGCAGACGTTTACGGGACTTTCGT 40393 31 100.0 36 ............................... AGTCATGCTATCACCTCCCTATTGCAAGATACGCGT 40326 31 100.0 35 ............................... ACGTGGAAGGCAGGGCTTTCGGTCGGCGATATTGT 40260 31 96.8 35 ...............A............... ATCCGTCCCGCATAGATACTGCCGGGGCGTTTAGT 40194 31 100.0 35 ............................... CTATATCCATCAACGCCGGTGATCGCACCGGAGGT 40128 31 100.0 35 ............................... GCTCTGTGTTCGGCGGTGTCGCATGCCGGCAAGGT 40062 31 96.8 35 ..T............................ ACGTGGAAGGCAGGGCTTTCGGTCGGCGATATTGT 39996 31 100.0 35 ............................... ATCTCCATACTAGAAAACATGCGCTCTTCGGGGGT 39930 31 96.8 36 .............................C. CCCCATTCGACCGGAAACGCCTAGGGAACTCCCTGT 39863 31 96.8 0 ...........C................... | ========== ====== ====== ====== =============================== ===================================== ================== 38 31 98.0 36 CGCGCCCCGCATGGGGCGCGTGGATTGAAAC # Left flank : CTACCCGCCATTTTTGTGGAAGTAGGTACTTGCTATGTATGTTTTGATCACCTATGATATTAGTACAGTTGACGCCGATGGGCGCAGGAGGCTGCGCCAGGTCGCACGAAAATGCAGAGCCTATGGGCAGCGCGTGCAGAACTCTGTCTTTGAGTGTAAGGTGGATCCAACCCAATGTAAGCAATTGGAACTTGCGCTGTTGGATATCATTGACCTGCAGGAAGACAGCCTGCGATTTTACTACCTTGGAAAGGATAAAGGACCGAAAGTAACGCATTATGGTGTTAAAGAGTCCTATGACTTGGAGGCGGTCATCATCATCTGAGCATTCATTACTGAGTGCGAAGGTGAAGTGAACAGAAAACAGAATGTAAAAATATAGGTGCGAGAATCATGCCGCAGGAGGGGCGTGGGACTTAGGTGCCGAGAAAATCGTATTTGTGGAGGGGAATGCCCATAAATACGTGGCAAAAGGGGGAAGTCGTGACTCCAGTTGCCGT # Right flank : TGAAAAATTAGGGGAGCGAATTGTCAAGTCAAGTGCAACTTTTCCTTATAGGATACTTTTTTCACTTGGAATTGAAAAAACTACTGCCTTGTGTCAAAATTGGGTGAGAGTATAGCAATGCAGGGAGGAGTGCAGCAATGACAAATTGGGGTCGGTTAGAGGAAATCGAGGAATAAGCTATGGCAAACTGACTGGTGGGAGGTGTCTGCATGAATTCGGCAGAGAAAGATCTTATTGAATTTCGTTTAACAAGTTACTGCTACGGACCGGATAAATTTCCCACACTAACTGTGGAAATATATATTAATGGCGAGAATTTTCGTGATAAAGTCCGTGACGTAGAACGTCCTTTTGCTGAGGCTGAAGGTAATCCAGGCATAGCAGGTCATGCCACAATAACCCCAAAAGGACTATATGAATCCTTGCATAATGACTATTTGGAATTTGACAGCGTATCTATTTTTGGATGCGGCTGCGGAGTCGTTGACTGTTGGCCGCTT # Questionable array : NO Score: 9.16 # Score Detail : 1:0, 2:3, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CGCGCCCCGCATGGGGCGCGTGGATTGAAAC # Alternate repeat : GTCGCGCCCCACACGGGGCGCGTGGATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CGCGCCCCGCACGGGGCGCGTGGATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.30,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //