Array 1 521430-522707 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADMUC010000002.1 Bacteroides intestinalis strain 1001095IJ_161003_E8 NODE_2_length_554350_cov_28.5591, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 521430 47 89.4 30 ......G.C...........A...................A.....T GCTGATGTGTTTGAGATAGAATACACCAAG 521507 47 100.0 30 ............................................... GTGCTTACCTTTTCAACAGCAGACACGCAT 521584 47 100.0 30 ............................................... TGAAGGATTCAACTTTACATTCACTTCCGA 521661 47 100.0 30 ............................................... TGAAGGATTCAACTTTACATTCACTTCCGA 521738 47 100.0 30 ............................................... TGTGGGTGTAATTGTGAGGACGGTTGAGCT 521815 47 100.0 30 ............................................... TTACTCATTTGATAGAGTAACAGCAGGTTA 521892 47 100.0 30 ............................................... TGTATATGAAGGAAGAAAACTTCCCAAGTC 521969 47 100.0 30 ............................................... AGATGATGCTATAGCCCTATCGGCTGAACA 522046 47 100.0 30 ............................................... ATCATTGTCGCGATGAAGGCGGCTTCGTTA 522123 47 100.0 30 ............................................... TTAACAGCTGAAGATATCGCAGCTGTGGCA 522200 47 100.0 30 ............................................... TTCAAAGCGAAAGCCAAGCCCTACATAAGC 522277 47 100.0 30 ............................................... TGCCAGTAAGAAGCAACAGATACTTGAAGA 522354 47 100.0 30 ............................................... GAAATACCGTAAGGGATGGATGAACCGGCT 522431 47 100.0 30 ............................................... GTGTCGTTCTATCCGTATGAGTTCACAGGT 522508 47 100.0 29 ............................................... ACATGGGCGGAACTTACCGAAATGTTCGC 522584 47 100.0 30 ............................................... CGAAACCAAAAAGTAACGCAATTTGTGATC 522661 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 17 47 99.4 30 GTTGTGATTTGCTTTCATTTTAGTATCTTTGAACCATAGGGAACAGC # Left flank : CAAGAAGCACATGGCTATTGCCAAGGGTTTGCTGAGTGAGGATGATTATTTGCTTCAGGAAATTCTCTTCAACCCGCGCACTCCCTCACAAGTGGAAAATATTCGTTTGGAACTGAAGAACTTGCTGGAAATTATCAGTACGAAGGATGCGGAAGGAATGAAGCAGTATCTGACGAAGATTAGGGAAAAGATAAAATAGATAGGTGAGATTAAGGGATTGAAGAGAGGAGGGGGACGAAAAAGGAAATGGGGCTTCTCTCTTCAATTTGTTAATAAAGAGAGGTGATGATATTTAGGATTAGGTAGAGGCATACTTATTTCTAAAATTATTGAAAATAGTCAAATATTGGCAGGAATGATATGAAATTCTCGTATACTACTCTATTTGAATTATTGTAAATGACTCTGTGTTTGTTTTGCTAGAACCATATTGTAACTGACTTCTATTTAAGTAGAACCATTGGAAACAGTGCATAGTATTCCGTGAGAAGTGCCCCGTC # Right flank : CACGACCTACGTTACATACTGATATCCAATTGGTTACAAACCATTTTTGAATTACAAAAACAATACTGTTTTTAATTAAAAAATCCCGCATTTAAGCGGGATTTCTTTTTCTAGAAAAGCTCTAATTGCTGGCCGGGAGTATTTATGTCCAAAGATCTTTTCCCATAAAACAACTCTATATTTCCAAATTGCTTATCTGTAATACACATAATTCCAACCTGTCCATGCTCCGGCAAGAAAGATTTAACTCTTTTTATATGAGCTTCTGCATTCTCACTACTAGCACAATGACGAACATAAATAGAAAACTGAAACATAGTAAAGCCATCTTTCTGCAGATTCTTTTTAAAATCTACATATGCCTTCTTATCCTTCTTTGTTTCAGTAGGTAAATCAAATAATACAAGTACCCACATAATACGATATTCACTAAATCGGTTCATCTCACATTTCCGGATATATTATTCTACGTAGTTCACCACTAAAGCATTTATACAGAG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCATTTTAGTATCTTTGAACCATAGGGAACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.83%AT] # Reference repeat match prediction: F [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.10,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.68 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //