Array 1 33945-32519 **** Predicted by CRISPRDetect 2.4 *** >NZ_SMMJ01000038.1 Delftia tsuruhatensis strain 11304 scf_39096_38, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 33944 32 100.0 34 ................................ CAACTCGCAGACAGGCGCCGCCAACAGTCCCATT 33878 32 100.0 35 ................................ ATATACGAAAGCAAGCCGACTAGCTCAGGCGGTAG 33811 32 100.0 34 ................................ CACTCCACATCAGACGGGGCAAAAAGGTGGGCGT 33745 32 100.0 33 ................................ AAAACAGTCGGACTGTTGAATTAGTTAGCAGTC 33680 32 100.0 36 ................................ TACGTGCGCAAGCGCGTGGGCGGCAAGCTGCGCAAC 33612 32 100.0 35 ................................ AACAACGCTGCAGCGACGTTTGAGCGTTCGGTGAT 33545 32 100.0 33 ................................ TCGCCCGCCACCTGGACAACTGGCCCGCAGGCT 33480 32 100.0 36 ................................ CATAGGCCACCCGGTAGCGGTCCACCTTCGCGGAGA 33412 32 100.0 36 ................................ GACCGCTCGCGCGACCAGATCCACCGCCTTCTACAC 33344 32 100.0 35 ................................ AGCATCTGCTCGTTGAGGCCGGCGCGGTCGTGCAC 33277 32 100.0 35 ................................ ATCACCTGACCTCTGAGCGCCCAACATGGCAGACC 33210 32 100.0 34 ................................ TGGCGCAGCGCCCGGGGCATGGTGGCCACCAGGC 33144 32 100.0 34 ................................ GAAGCCGAGCAGGTTTGCGAATATCAGCGCGTAG 33078 32 100.0 34 ................................ CTGCCTTGCGCAGCTGCAGGCCTGCGGTCAGTAC 33012 32 100.0 34 ................................ TTCCTCGACTTCGAGGCCCTTTTGAGTCTCCCGG 32946 32 100.0 35 ................................ GGCAGCAGGCCGCAGTTCGGCAGGTAGCGGCACGC 32879 32 100.0 33 ................................ TTCGCAGACGCTTCCGACTGGCACCGGCTGGTG 32814 32 100.0 35 ................................ CTCCCGAGAATCTGGGTGCTTTTCTGGACCTGCCA 32747 32 100.0 34 ................................ AGCAACGATGTCGTCGTCAATGTAGTGCTGGCTG 32681 32 100.0 33 ................................ CAAGAAGCTGCGCGGCTTGGCCTGGATCGGCGT 32616 32 100.0 34 ................................ AGGCCCATGCCCTTTCCGAGGTTCAGGTGCGCGT 32550 32 93.8 0 ..............T...............G. | ========== ====== ====== ====== ================================ ==================================== ================== 22 32 99.7 34 GTCGCGCCCCGTGCGGGCGCGTGGATTGAAAC # Left flank : GGCGTGAACTACGTGACCGGCGACTACTCGCGCGGCGTCAGCGGCTTCTGGGTGGAAAACGGCGAAATCGCCTTCCCCGTGCATGAGATCACCATCGCCGGCAACCTCAAGGACATGCTCAAGGGCATCGAGGCCGTGGGCGCAGATGCCTACAACTACGGCGCCAAGACTGTGGGCTCTATCCTGATCAACCGCATGAAGGTGGCTGGTAGCTGATTGGCTTGCGGCTGCGCATGCTGATGAAAAGCGGCCCGAAAGGCCGCTTTTTTGTGGGCACCCAGTCACCGCGCGCCCCGGCTGCAGTTGGCCGCACCAGCTCGCGTCCCGCGAACCCCAAGTGACCTTTGTCCTCCCCTGAGGTTCGCATTTCTGCAAGCCGTTGTTTTTGTTGAGGCATCACTGCGTCTGTCGTGGTCCTTGCCGTTTTTCCGTGACAGAGCGCGCAGGTTCGCGATGGTGAAGCTTTTTTTGCAGTGGTACGGCTGGGTTATAAGCATGCT # Right flank : ATGGCCATCAAGCGCGAAATGACGGGTTTTGGCAATGGCTGGCAGCCCGATGCCTGCATGCCGGCAAGGCGCTGTCCTACTGGATGTGCAGGGTTTGGGAAGGCGGTGCGAGTGATTCAAATTGTCAAATTTGTTCCTGGATGTGTTTCTTCCGTGCCAGCAGTCTGGCCGGTTTGCGTAGGTGGTTCGAGGGAGAGCGACGTGGGTTTTCTGAGGCGTATGAAGTTGGGAACCATGCTGGGCATGGGTTTCCTTGCGGTGATCGTGGTCTGCGTGTGCGTGGCCGGCTTCGGCTGGATGAAGCTGCACGATCAGGGGGAGCAGTTGCGTGTTTTGGCCGAGGACCGCATGGGCAATCTGGCCCGGCTGCAATCGCTCAAGGACAACGCCAATGTGTCGGCGCGGGTGGTGCGCAATCTGGCGCTGATCACCGATCCGGCTCAGATGGCCGAGGAGAGCCGCCGGCTGGATGAGGTGGTTGCCAGGAACGGCCTGGTCAT # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCCGTGCGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGCCCCGTGCGGGCGCGTGGGTTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.80,-6.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,9.41 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //