Array 1 11892-13435 **** Predicted by CRISPRDetect 2.4 *** >NZ_LZYZ01000003.1 Clostridium saccharobutylicum strain L1-8 CLOSA_contig000003, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 11892 30 100.0 35 .............................. TAATCTTTATCATTAAATGCAGCAAGTTGTCCATA 11957 30 100.0 35 .............................. AAATTTATGTAAACGAGGTGTAATTTACATGGGTA 12022 30 100.0 35 .............................. ATAATTTGGTTAAGGGAAAAACTTATAATTTTTCG 12087 30 100.0 35 .............................. GCTTCATCTATAAATAAATGAATTGGCAATGCATT 12152 30 100.0 36 .............................. GAATTAGAGGTAAACTTACAAAAACAATTGAATATT 12218 30 100.0 36 .............................. AAAACTATTGATATTCATTCATCTATTGAAGAAATG 12284 30 100.0 36 .............................. CTAGGAAATATTGCTTTTTGTTGCCCATCTAATAAT 12350 30 100.0 36 .............................. AGTAAAAACCACACACCGCTAGGGCTAACATGGTGA 12416 30 100.0 36 .............................. GTTGATGAACAAGTTAAAGAAATTAATTTATTAATA 12482 30 100.0 36 .............................. TTTAAAAGTAGATGTAAGAAAATATAGGTGGAGAAA 12548 30 100.0 37 .............................. AAATTAAAAATGATGTTAATAAGTTGGTAGATGGTAG 12615 30 100.0 36 .............................. AAACCGGAAACAGTTAAAGTCAATTATATAGGTAAA 12681 30 100.0 35 .............................. CATATTATTCGTTTTTTAACTCATCTAAAGAAAGT 12746 30 100.0 36 .............................. GATAATAAGCTTGAATTAGTTGATTCAGATATGGAA 12812 30 100.0 36 .............................. AAATACAAATGGATTGAGATCACCAGTCACAAAGCT 12878 30 100.0 36 .............................. GTAAAAAAAGCACTCAAGGAAATAGGAATAGCAATA 12944 30 100.0 36 .............................. AATTTTGATGAAGTTAATAAAAATCATGTATTAAAA 13010 30 100.0 36 .............................. CAAGATTTTGAAAATGTACAAGCATATGCAGGATTC 13076 30 100.0 36 .............................. AATGGCAAACATTATAAAGGAAAACATATGTTAAAA 13142 30 100.0 36 .............................. TATGGTAGAATTAAGACAAGAGCAATGCAACTTATT 13208 30 100.0 35 .............................. CAAGCTACAGCAGAAGCAGATAAAAAGAAAGTTTC 13273 30 100.0 36 .............................. TCTTTATCAAATTCTAATCTTACCTTTGTTCCATTG 13339 30 100.0 37 .............................. AAAACTGGTGATGTTGTTAAGATAAGTAATTTAGCTA 13406 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 24 30 100.0 36 CTTTTAATTTATCCATATTGGAATGTAAAT # Left flank : GGTTTAAAATATGGTGGTAGTAGGAGAATGATTAAATGTATGTTGTTTTAGTATATGATATAAGTGGAGATGAAAATGGTCAAAAGGTATTGGGCAAGGTATTTAAGATTTGTAAAAAATATTTAACACATATTCAAAATTCAGTTTTTGAAGGTGAGATAACAGAAGGACAAAGAGCGAAATTAAATGCAGAATTAAATAAATTCATTAGAAAAGACTTGGATTCTGTGATAATATTTAAAAGTAGAAACGAAAAATGGCTTGATAAAGAATTTTGGGGTAAAAAGGATGATGCATTATCTAATTTTTTTTAATAATCAATTGTCGATGGGAGATACTGCTAAAATACTGGGAGTGCGACAAAGCGTTGCAAATAAAAGGTTTATGGTGATAAAAAATTAAAATTATAATATTATTGGATCAATAATATAAATAACAAAAAGATATCGACAAAAACTAGGCTTGTAATGCTTAGTAATAGGGCCTAGAATAAGTGGTGT # Right flank : TCTATAATTACAACTGAAATGAATGTGAAATACATCCAGAGGAAACAAAGATTACCAGATTCAAGCTATCTGATTAAAATATTTTCTAGATAATAAACAGAAATAATAAGTATAAATTGTTCTGTTAAACTATTGATATTACTTAACTTAAGAAATGGGTGGAAGAATAAAAATTTCCACCATTTTTCCGCCCATCAGTAAGACATGATATATTATTTTAAAGTACAGTATGTAAAGATATGATATTTTTAAAGTGAAATTTGAAGTAATTTCAATGATGAATAGATACAATAAAATATACTAAGTTAGAATTAGGTATTTTTATTCAACGCATTCCTCACGTTCAAACTACTGTCCAACATGAAAAACGTTTTGTAATATGTGGAATTATATATTTTAATGATAAAAGTGTAACATTCCACTAATCTTCCACTATGCACGACAATATAATAAAATATAAATAGTTATAGGAAAATATGTAATTTCATTTAAAGCCAGTT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTAATTTATCCATATTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-2.20,-2.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [63.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA //