Array 1 1311518-1310758 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP031377.1 Streptococcus suis strain ISU2614 chromosome, complete genome		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
   1311517	    36	 100.0	    30	....................................	ATCTGGGTTGCAACTGGGGGCAATGTAGAG	
   1311451	    36	 100.0	    30	....................................	CAGCATATCGTGTCAAAGGTCAAAAAAGGC	
   1311385	    36	 100.0	    29	....................................	TGGCCAAACGTGGGATCAAAACCATGTTG 	
   1311320	    36	 100.0	    30	....................................	CTAAGATAAATAATATCCCAATTAATACTG	
   1311254	    36	 100.0	    30	....................................	ATTGGTTGGGTCCCGATAAACAAATGATGT	
   1311188	    36	 100.0	    30	....................................	ATTCTTTACTATCCAAATACGAAGAGGCTG	
   1311122	    36	 100.0	    30	....................................	TAATTATCTCTTTGGACCGCATCGTGGCCA	
   1311056	    36	 100.0	    29	....................................	GGATTATTGAGTGGGTTAACATCTGCAGG 	
   1310991	    36	 100.0	    30	....................................	AACATCAATGTATTTCTTTTCGACCTTGTC	
   1310925	    36	 100.0	    30	....................................	CACTTCCTTACGCTACTAATTTTCAGTTAA	
   1310859	    36	 100.0	    30	....................................	CTTCTGGTAGTTATCCCCATAACATTTGTA	
   1310793	    35	  83.3	     0	.......................T..T.-....TCA	|                             	T [1310769]
==========	======	======	======	====================================	==============================	==================
        12	    36	  98.6	    30	GTTTTTGTACTCTCAAGATTTAAGTAACAGTAAAAC	                              	       

# Left flank :   AAAATTTAGATGATTACCTAACTTACGATTCTTTTGTGAGAATAGCACAGTATTTAGAGGAACTTAGTAATAAGTATCCCTATTTCAACACAATCTTGTTTCCTTCTCAAGAGGGCTATTTGTACTTGACCGAGGCAACGCTTGAGACTGTTAATATTGTGTCTGATAGAATTGAACACTACCCTGCTTTCACGTTTCTCTATACTCGTTATCAGCAGTCATATCCCTCAACTAGCCCACTAGGTGAAAAAGAATTTTTAAACTCTTTGAGAAAAATCAGTTCCTATTTATTCTCTTCAGACATTAATAGAGTCGTGAGCTTAGCAGACATAGACCTAGTAACTCTAAAGATAGTTAATTCACTTTATCAGTATGATATTAAGATGGTATATATGTATAAAGGAATATCAAAATTAGAGGAAAATTACCTTTCTTCCTAAATTTGACAAGTTTTTCGATAAATATTATAATTACGGAAGAGAGTACAAAAACCATTTGAG
# Right flank :  TAAGCGATAGTACATCTCCCCCACAATTTTCTAAAATTCTTGTTTTGTCTTGCTTGCTTCATGCTATAATAGTTGTATCAGTTTTTTAAAAGGAGACAAAGATGACAAACCTAAAAGAGCAGGTTGGGATTAAGGCGGCGGAGTTTGTGACGGACGGTATGATTGTTGGGCTGGGGACTGGTTCGACGGCATACTATTTCGTGCAGGAGATTGGCCGCCGGGTTGCAGAAGAAGGGTTACAAATCACAGGCGTAACGACCTCTCATGCTACGGCAGAACATGCTGCGTCCCTTGGGATTCCCCTAAAAAATATCGACGAAGTCGAATATGTGGACTTGACGGTGGATGGAGCAGATGAGGTTGATGGGGACTTCAATGGGATTAAAGGCGGTGGCGCAGCGCTTCTCATGGAGAAAGTGGTAGCAGTCAATAGCAAGGACTGCATCTGGATTGTGGATGAGTCTAAGGTGGTTCAAACCCTAGGAGCCTTCAAGTTGCCG

# Questionable array : NO	 Score: 6.19
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTTGTACTCTCAAGATTTAAGTAACAGTAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:72.22%AT]
# 	Reference repeat match prediction:         R [matched GTTTTTGTACTCTCAAGATTTAAGTAACAGTAAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-1.70,0.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [7-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [63.3-73.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,5.18   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
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