Array 1 63-692 **** Predicted by CRISPRDetect 2.4 *** >NZ_JOMQ01000050.1 Acetobacter cibinongensis strain DsW_47 contig_50, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 63 28 100.0 32 ............................ AAAAACTGACAAAAGGTGAGTTCTCGAAAGAA 123 28 100.0 32 ............................ CTTGTGCATCTTCATGCGTTGCACAGGGACGG 183 28 100.0 32 ............................ ACGGAACCGCTGCATAAGTTGCCGTCCACCGC 243 28 100.0 32 ............................ TTGCTTAGAACCTTTATGAGTGCCTTTACTTC 303 28 100.0 32 ............................ ATTTTGTCGAGGAAGGTTTTAGAGCGGGAGAC 363 28 100.0 32 ............................ TACGTCTCGCATTATCAGCGGCACGTCCCCTG 423 28 100.0 32 ............................ TTTTGGGCCTTGAGCGTCGGTGTCACCTTTTG 483 28 100.0 32 ............................ AGCCGGGCGGTGGGTACCCGTTGGGTCATACA 543 28 100.0 33 ............................ GCTCCCGGCAAAAAAGAGTGTTATCGGGCATCC 604 28 100.0 32 ............................ CGCGCAATCTCCGCCCGCACGCGCTGTTCTGC 664 28 96.4 0 ........................T... | A [684] ========== ====== ====== ====== ============================ ================================= ================== 11 28 99.7 32 GTTCACTGCCGCACAGGCAGCTCAGAAA # Left flank : CCTGTGAATCATAACCTCTCGCTCAGTTCAATAAATTAGTAGGTCCTGAGCCTAGATTTGGCG # Right flank : ACAGAGGGAAGCGTAACGTCTGCCCTTGTTAAAATGTAGTGGTCATATTGACGCCCAGCACCGCGCTCCTGCGGTGGGGAATGGTGGTGTTTGCAGGGGAAATGGTGCCGCCTGTATTGAAGAAATATTGAAAGTCCGGTTGCACGATCAGGTAGGGTGTTACGGCGGCCTGATATGTGAGTTCAATATGATGTTCAGGTTTGAGCACATAAGGCTCCTTGGTGCCAAAACGCACGGAATCCTCGGCGTTTTTCAAAGCGGATTTGCTGTACAGGCTGGTGCCCCAGGCAATGCCAATTGTATCATCCGGGCGGCCGGGAATCAGTTCATCAAAGGTCAGGCCGCTTTGTAATTCCAGAGAAAAATAGCTGCGTTTCTGATTGGCGACAGAGGTCCGGAAGAAAAAGTTTATGGTTTTTCCGGAGTTTTTCTCCTTACGCCATATCATCTGGTCCAGCACGGCATAGGCCATCCAGTTTCCGGGGTGGTAGCGCGGCGTG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 11931-12259 **** Predicted by CRISPRDetect 2.4 *** >NZ_JOMQ01000032.1 Acetobacter cibinongensis strain DsW_47 contig_32, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 11931 28 100.0 32 ............................ TGAAGCGCCGTATCCCCATCAGACCCCGTTAC 11991 28 100.0 33 ............................ CGTTATGCGCGGGCTGTTTGTTGTTAAAGTGGT 12052 28 100.0 32 ............................ TGAAAACTTTTGGTGATGTGGCAACCAAGATC 12112 28 100.0 32 ............................ CGATGTGTTCCCGCTGCGCGAACTAAAGCAGA 12172 28 100.0 32 ............................ AGGCTGATCCGGCACCGCGCAGCAATCAAGCG 12232 28 71.4 0 .........T..........AAGGC.TC | ========== ====== ====== ====== ============================ ================================= ================== 6 28 95.2 32 GTTCACTGCCGCACAGGCAGCTCAGAAA # Left flank : TTGGAGCGTATAGACGTTGGGTGTCTGGTGTTTCACGAGGCATCCCTGTGGCAAGAGGCAAAAACAAACCGGGCAGCAGGCCCACGGCAACGAACCGGAAGCAGCGTGGAGACTTCCGGCCCGCATAAGGTGCGGGCAAGACGGTGAGGACCGATAGCATAGCGCTACGGTGGTGTGTCCAATCCGACTACAGGAAATAGAGGCATGACGAAACGCTTTGCCCGCTAAAGTGCGTACTATTTGCCGGGCTTAGTAAGGTAGCCGCCAGTCTGGTCAGCACGAGACAGTGAGATAACAGCTACGGGCTATTTCTCTGGTTTCTCAGGCGCGTTTCGGGTTATAAACCTGCTTCACGCCACTCCAGAAAAACCCTTTTTTCTGGCCATATAATTTGTTCATTGAAATTCAAAGACTTAACCAACAGATCAAAAAAGAGGGTCAAATAGACCAAAACCTCTTTTTCTCGCAGAATTCCGCTAGTATAGCCCCTATTGTCTCTA # Right flank : CCGTACTCACCAAAAAACCCCCAGCCCGGAAAGGCTGGGGGTTTTATTGTCACTACTCACCATAGAGTATTGAAAAATCAGGATTTAGACCATTCCGGGTGGTGTGGCACGGTAATGTCCCGGCCTTTCAGCATCATGTCCCAATAAACGCGGGGGAAGACCGTTGTCTTCAGGAACCATGCAAAGCGGCTTGGCTTGCGCTGGTCATAGGGGAAGCTGGGGGCCGGTTTGCCGCCGTAAAGGAATTCAGCCAGAACAATTTTGCCATAACCAACCGTAAGCGGGCAGGCACCGTAACCATCATAAGCACCGCTGAATGGTTTGCCATCAAGGGACGCCAGCAGGTTGGCCACAACAATAGGGGTCTGGGCGCGGGCAGCGGCCATGGTTTTGGCGTTGGATGTGCCAATAACGTCCCCCAGCCCAAATACCAGCGGATATTGTGTGTGCTGGAGTGTTGCTGGGTCTACAGCCAGCCATCCACCCTCGTTCGCCAGTGG # Questionable array : NO Score: 6.02 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [60.0-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 50303-51350 **** Predicted by CRISPRDetect 2.4 *** >NZ_JOMQ01000030.1 Acetobacter cibinongensis strain DsW_47 contig_30, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 50303 28 100.0 32 ............................ CGGAGCACCTCCTCCTCCTCCGCCGCCGCCTT 50363 28 100.0 32 ............................ ACTTCCGCAAGTCTTGATCTAGTTCTAAACCG 50423 28 100.0 32 ............................ TGAAAGATAAAGGACGCTATAGGTGTTTTGTC 50483 28 100.0 32 ............................ TTTATCGCCCCCGCGCTTGACGCCATACTTTT 50543 28 100.0 32 ............................ AGTGGGGCCAACATCCCCACGCGGCCCGGTGG 50603 28 100.0 32 ............................ TCACCTTCTTTTCTCTGCCCGTTATGAGTTCT 50663 28 100.0 32 ............................ TTCCCGTCTTCGCCACGGTCGCCTTTGTCGCC 50723 28 100.0 32 ............................ GTTGGCTTTCCAGAAGTAGCACTTTTGTAAAG 50783 28 100.0 32 ............................ ATGCAGGCCATTCTATCCGGCGCTGGTTCATT 50843 28 96.4 32 ....................A....... GAGTACGTTGGCGAAGTGTGTTCAACCGCGCC 50903 28 100.0 32 ............................ ATCAGGCGGCACAGACATGACGCCACGCGGTG 50963 28 100.0 32 ............................ CATTATACTGCCCGTTGGGTGACTGGTTGAAC 51023 28 100.0 32 ............................ AACATGGGGCATATTTTTTGCTGATGCTGGAG 51083 28 96.4 32 ....................A....... ATACACAACGGAGACGACCATGGAACTGATCC 51143 28 96.4 32 ....................A....... AACGCAATAGATGCAAGAGCACCACTTAAAGC 51203 28 100.0 32 ............................ GCCCAGATCGCAGCATCGACGCGGATTATGTC 51263 28 96.4 32 ...........T................ GTGACTGGCGATCTGCTCACGATGCTGCTGGC 51323 28 82.1 0 .............A......T..CC.C. | ========== ====== ====== ====== ============================ ================================ ================== 18 28 98.2 32 GTTCACTGCCGCACAGGCAGCTCAGAAA # Left flank : GAGCGCAAGGTTAACCCGGAAACACTCCTCTGGACCCGTATGGTGCCGGGTGAGTGGGCGGATAAGCTGCGCGAGCTGGTAGAACGGCATGTGGCAGAAACGGGTTCCCCTTACGCCACCACGCTGTTGCATAAGTGGGATGAGATCTTGCCCCACTTCTGGCAGATTGTTCCAACGGAGTATGCCAAGATTATCGGCTTTGAAGCCCCGGCACAGCCCCTCAAACAAACAGCGTAAAATCTGACGTAGGCAGGCCAGCCCCTTGCAAGAGCCGCATTGAAGCAGCTTTTTCAGGGCGCTGGCCCGTTTGTTTTGAGCCAGACCGCTTTTGTGCAGCGTGGTTGCCAAAACTATGCTACCAAACTTTACCCCTCTTTTTTGAGGGATAATGAAATTCTTTGAAAATCAAATAGATAGCCAGATGCCCCGAAAAAAGGGGTAAAACGGCTAAACAGGCAATAAACCGCAGTTTCTCAAAGCGTTAGCCAAAATTTACTCTT # Right flank : ACGTTCTTCAACGCCATCGCCAGAGCTGCATTGGATGTGAAGCCCTGTTGTGTGCAGATGCTCTCGCCTCATTTCAAAATGCACTGTAGGGTGAGGGTATGGAACACACAGCGCATTTCCTTCGTTCGTCCTCGCGTCCGGCCTTAGCGGCGGAAGCAGGTGTTGCCACAGCGGCTCAGGCACAGCACGGGGCTGGGGATACTCTGCCCCGGTGGGATCTTTCCGCGCTTTATAGTGGGATGGAAGATCCGGCACTGGCGCAGGATCTGGCAGATGCCCAGACCCAGGCCTCAGCCTTTGCCGCCCGTTATCAGGGTAAGCTGGCCAGCCTGTCCGCCGCCCAGTTGGCGCAGGCCATTGTGGAGAGCGAAGCGATTGATGAAAAGCTGGGCAAGGCCGGGTCTTATGCGTCTCTGCTGTTTGCAGCCAATTCATCAGACCCTGCTATCAGCCGGTTCAGCCAGTCCATTAACGAACGCCTGACAGATATTTCAGGAGAC # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //