Array 1 626-1903 **** Predicted by CRISPRDetect 2.4 *** >NZ_JGEH01000054.1 Bacteroides fragilis str. 3719 T6 gbf3719T6.contig.53, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== =============================== ================== 626 47 95.7 29 ...A......A.................................... AGTTTTCGTAGCTTAGTTCATTCAGAATA 702 47 100.0 30 ............................................... AGTTTTGGCATAGTTTGCATGTCAAAATGA 779 47 97.9 30 .........................C..................... GTGGAGACCCGAAGGGCAGACGCGCTCAAT 856 47 100.0 30 ............................................... GTTTCCGGTTGAAATTAGAGCGTGAAAAGT 933 47 100.0 30 ............................................... GTTTCCGGTTGAAATTAGAGCGTGAAAAGT 1010 47 100.0 30 ............................................... GTTTCCGGTTGAAATTAGAGCGTGAAAAGT 1087 47 100.0 30 ............................................... GTTTCCGGTTGAAATTAGAGCGTGAAAAGT 1164 47 100.0 30 ............................................... GTTTCCGGTTGAAATTAGAGCGTGAAAAGT 1241 47 100.0 30 ............................................... GTTTCCGGTTGAAATTAGAGCGTGAAAAGT 1318 47 100.0 30 ............................................... GTTTCCGGTTGAAATTAGAGCGTGAAAAGT 1395 47 100.0 30 ............................................... CCATTCATGAAATAGGAAATATGCTCTATC 1472 47 100.0 29 ............................................... TATCTTCGTCAAGAACGGCATTACCAAAG 1548 47 100.0 30 ............................................... GTATCTTTGTTATTTGCCAGAAGAATAGAG 1625 47 100.0 30 ............................................... GTTATACATCAAATGCTACCGGTTATGTTC 1702 47 100.0 31 ............................................... TACAAATGCGGCAGCCCCTAAACTTGTCAGG 1780 47 100.0 30 ............................................... AAAATCAATTTGTACTATAAAGACTATGAC 1857 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== =============================== ================== 17 47 99.6 30 GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC # Left flank : GGTGGGAAAGACTTTTATTTCAGGGATGGAAAGAACAAAGCTTTTGCTTCCAAAAGACTTGTTCTTTGAAAACAAAAGACTTGATTTAACAGTGTGTTAAATCAAGTAATATGAAGAGAAGAAACAAGAGGAGAAAAAGGGTTGAAGATGAAGACGATAGAGAAACGAGGGAGTATCTGCCAAAAAAAGGATAAGTGCCGGACCGAAAGGGATAGTTGCGATTAGGGCAAGTATGGGGGCAGGGGATTTTAAAAGCAAGGTTGGGAGTGAAAGCAGGAGGAGTTTACTGCTAAAGACCATATTATCCAATTAACAAACCGATAAACAATCTATTAAATGGTTATTCACAATTCGAAACAGCTTCTAATGGTAACTATATTTAAACCGTCTAATCAGATACACTTAGTAGCATACTTTTCAATTACTAAGTAGAGTACTTTTTAATTATTATCTACACCATCATAAACAGCATATACTATCTGATGAAGACAAAGCGATGC # Right flank : CAGATTTCACATAACATATTGTTCTTCAACAAGTTAAGAGTAAATTAGAAAAAAGAAAAAGAAGACTGTTTCCAACACAAAATCTCGCATTAATGTGAGATTTTGTGTTCTAGAACAACTCCAATTGCTGTCCCGGCGTATTGACATCTTGCACTTTCTTTCCATAAAAAAGCTCTATATCTCCAAATTGTTTATCTGTAATACACATGATTCCGACATGCCCAAATTCTGGGAGAAATGATTTAACTCTTTTTATATGTACTGCTGCATTCTCACTACTGGCACAATGACGCACATAAATGGAAAACTGAAACATCGTAAAACCATCCTTTTGTAGATTCTTTCTGAAATCGGCATAAGCCTTTTTTTCTTTCTTAGTCTCAGTTGGCAAATCAAAAAGAACAAGCACCCACATAATACGATATTCATTAAAACGATCCATAATCTATCGTTCGGGATAGGAAATTCTCCGAAGCTCTCCATTGAAACATTTATAAAGT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: F [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,1.05 Confidence: MEDIUM] # Array family : II-C [Matched known repeat from this family], //