Array 1 12940-12666 **** Predicted by CRISPRDetect 2.4 *** >NZ_BGWD01000012.1 Escherichia coli strain TUM18698, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 12939 29 100.0 32 ............................. CAAAGCGCGCATTTCCGGTGGTGAGCAGGCGG 12878 29 100.0 32 ............................. GCTGGCGAACGCTCAAGGCTGGTGGAGTGAAC 12817 29 100.0 32 ............................. ACAATAACGTTAATGCCACCTTTTATATGACG 12756 29 93.1 32 .............C..............A TACTGATACTAAAACGGGATTTTCGTTGTTTC 12695 29 100.0 0 ............................. | T [12668] ========== ====== ====== ====== ============================= ================================ ================== 5 29 98.6 32 GTGTTTCCCCTGCGTGCGGGGGTTATCGG # Left flank : GGGGGGCGGCGATCAGGTTTTTACTCAAAATGGGTTTTACGGTCGGCCTTGTAGGGTATCCCGCTGTAGGTAAGTCATACCTGCTCGCCCGGACACTGCCAGAAGGTATTATTGACGGTCGAGAGCTGGTGGAGAAGAACAACTGGGAAACGCCGGTGCCATTCCCTTCCGACAAGATCCCGTCCGGGCCTGTAGGCCTTGATGAAGGAAATGTGTTCGGGAGTCAGGCTTTGTTATCGGTAGCGGCGCCCCTGAAAAAATGCGGTGTCGTGTTTACTGCTCAACGTCTGAAAAATGCAGAGAGCCTCGCGGCAAGTTTAATGGCGCGGCATGTGCTGATTTTTTATATCGGTGAGTATGAGTCTTTTAAGTTTGAAGTTGCGGCACAGTATGATCGGCGCAGGAAATCCTGAACCTGCGGAGGTGATTTTTACGCCTCAGAATCTGGTGGAAAATGAATGAATAGAATTTTCATTTGTAATCAATAGTATATAGTTAGA # Right flank : GCTATATCGAACGCGTTAATGGGAAGTGATTTTCAGGGAAAAACATTCGCTCGCAAAATTCCTATAGCAAAAAACGGTTCGCCGGTTTTTTTTGTGCCTGCGGTATTCGGCCTCTCTTTTGCGGCAGGGATAATACATCCCTGCGAAACTACTTAAAGAAGGTGACGATAATGACTCAGGTTCAGAAAGGTAAAACGGTTCCCGTTCGGCCACCAGCGACGTATTTCAGCTATAGCCCCGACGACGGGTATGAGGAGCATGACTCCCCGGAGAAGGCAAAAGCAGCGGCAGACGCTGCAATTGATGCTTATCGGGGTGAAGCATGTGATGGCTGGCCTGATGAAGTGACCGGCGTTACGTGGGGTGTGGTGGCACAACGAGCGGCAAAGTTTGGCGAGCGTAAGCGCACCAATGAAGACGCGCATCTTTCTCCAGAAATTCAAACGGTCTGTGACTACTATCTTGCGCCGGAAGTGACCGTACCAGCCTCACTCCCCTTC # Questionable array : NO Score: 2.99 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTTCCCCTGCGTGCGGGGGTTATCGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,1] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.70,-9.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA //