Array 1 3630-4456 **** Predicted by CRISPRDetect 2.4 *** >NZ_LIQO01000266.1 Streptomyces albus strain NRRL B-2465 B2465_contig_266, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 3630 29 100.0 32 ............................. TGGCCGAGCGTGCCCGCATCCTGGCCGACGGG 3691 29 100.0 32 ............................. GCCACCTCGCCGAGGAGTACGGCATCGCCCAC 3752 29 100.0 32 ............................. AGCTCGGGACGCCGCCGGCACGGGGTGGGGGT 3813 29 100.0 32 ............................. GCGGTGACCGCGCTGGCGGTCGCCGTATCCGA 3874 29 100.0 33 ............................. TGCCACCGCGGCAGCCCCAAAAAGACAGGGCTC 3936 29 100.0 32 ............................. CACACCCACACGACCTACGTGGCCAAGGGCTC 3997 29 100.0 32 ............................. GAGCCGCGCCCCTGCACAGAGGTGACGATGCC 4058 29 100.0 32 ............................. TGCGGCATCCTGGACCAGGAGCCGCAGCCGCA 4119 29 100.0 32 ............................. AGTACCGGGACTGATTGACACGGCGCCACTCG 4180 29 93.1 34 ..........................TT. GAGGGCCGGGCCCCCGGACCACCACAGGTCCCAG 4243 29 100.0 32 ............................. TGGAACGCCGCAGGTCACGGCCGCCGAGGAGC 4304 29 100.0 31 ............................. GCCCGGGACCTGTCCGACTCGCACCAGCCGA 4364 29 96.6 32 ...................A......... CGTGCTCCCGTCCGGCGGCGGCCCGGCCGGCA T [4368] 4426 29 93.1 0 .........................G..T | GC [4448] ========== ====== ====== ====== ============================= ================================== ================== 14 29 98.8 32 GTGCTCCCCGCGCCCGCGGGGATGGTCCC # Left flank : GACGGCGACGTCCACATCGACAGCGGACGCAACCACGGAGAAGAGCCCCTCTGGTGACCGTCATCATCCTCACCACCTGCCCCGCCGGACTCCGCGGTTTCCTCACCCGCTGGCTTCTCGAACTCTCACCCGGCGTCTTCCTCGGTGCCCCCTCCGCCCGCATCCGGAGCATCCTGTGGGACGAAGTCCGCCAGTACGCCGGGCAAGGCCGCGCACTCCTCGCCTACCAGACCGACAACGAACAAGGCTTCGCCTTCGAAACCCACAGCCACCCCTGGCACCCTGTCGACCACGAGGGACTCACCCTCCTCCACCGCCCCACCACCCCCAGTGCGCCGGCTGCCGCTCCCGATACCCCACCGCGAGGCTGGAGCAAGGCAGCCCAACGCCGCTGCTTCCGACGCACATAACCCGCTCAGAAACAGATGCCCTATATGTCCGACTCGGTGAAAGTGAGTAAAACCCGCCCCCACCCGCAGTAAAACCCCACGTCGCGCCCT # Right flank : TCCTGCCCGAAGCGCTTCGGGTTGCCCGCGCATCTGGGATGCCGGGGAAACACCCCCACGACGAAGCCGTTGTCGTGCTGGACGAAGACCAGGTGGGCGTCCTGTTGCGGATGATCCACGATCACGCACCGCTCGGCGTCACCATCACGGAGCGGAACCTGGTCGAGGAGATCGACCAGGTGGTCACCCAGACCCTCGTCCGGTCACGGAACAACGCCGACGACCGGAAGCGCGGCGTCCGCCGCGCCATCGCCGCGGTCTTCCGCCGGTACGTGCTGAAGCCGGTTGGGGAGACGTATGACTCTACTGTCCCTGCATCGAAGCCCACTACCTGGTTGATTGACGAGCATGCCGAGGCCCAGCGCGCAGGGCGCCTGCCGGCCTCATAACGCAGGGCGCCTGCACTCCGCAGGCTGGGAGGAGTGCTGCTCTTCAAATTGAGGCGGGCGTTGAGAAGGCGCCTGCTCTACCCACTGAGCTACGGGGACTGACCTGCGGAA # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-30.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 159-8 **** Predicted by CRISPRDetect 2.4 *** >NZ_LIQO01000320.1 Streptomyces albus strain NRRL B-2465 B2465_contig_320, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 158 29 96.6 32 .............T............... TGCTCGACCTGGGTAGCGGTGTTGTCGCGCAT 97 29 100.0 32 ............................. GACGGCACGGCCGCGTCCGGCGCGGGGTACGA 36 29 96.6 0 .........................C... | ========== ====== ====== ====== ============================= ================================ ================== 3 29 97.7 32 GTGCTCCCCGCGTATGCGGGGATGGTCCC # Left flank : CGACTCCGTCAAGCTCCGCACCGACCACGACGGAGAAGTACCCGGCGGCCTCAACCACGGCGAGGACCCCATCTGGTGACCGTCATCGTCCTCACGAACTGTCCCGCCGCGCTACGAGGCTTCCTCACCCGCTGGCTCCTCGAAATCTCCCCAGGCGTCTTCATCGGCCGCCCCTCCGCCCGCATCCGCGATCTCCTCTGGGACGAAGTCACCCAATACTCCGGCAAGGGCCGCGCCCTCCTCGCCCACACAGCCGACACCGAGCAGGGCTTCACCTTCCGCACCCACGACCACGCCTGGCACCCCACCGACCACGAAGGCCTCACCCTCATCAACCGCCCCAAGCCCCGCCTCTCCCCGAAGCCACCACCGACGACGGGTTGGAGCAAAGCGGCGAAGCGACGCCGGTTCGGCGGGGGTCCGAAATGAGAGGTATACCCGATTCAACGAAAGTGAACCCCACGGCGGCCCCCGCCGGATAAACCCGCAGGTCACCGAGT # Right flank : CGCTTCCT # Questionable array : NO Score: 5.56 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTATGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCATGCGGGGGTGGTCCC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: R [5.0-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 9677-10380 **** Predicted by CRISPRDetect 2.4 *** >NZ_LIQO01000320.1 Streptomyces albus strain NRRL B-2465 B2465_contig_320, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ==================================== ================== 9677 29 100.0 32 ............................. TCTCGTACCTTGGAGTCATCGGGGGGTACGAA 9738 29 100.0 32 ............................. GCCAGGGCGGGGAGGGCGGAGAGGGGCCACCA 9799 29 100.0 32 ............................. CGCACGGTCGTCGCGCTGGAGCCGCGGACAGG 9860 29 100.0 32 ............................. TCCCGGCAGATCCGCAGCGCGTGGGACCGGCT 9921 29 100.0 32 ............................. TCGCGGAAACTGGCGGTGATCTGCTGGAGGTT 9982 29 100.0 32 ............................. CGGCTGGTGCCGACGGGGGACTGTGCGCGGGA 10043 29 100.0 32 ............................. AGCTCAAACAGGGCAATCTAGGTGGGGGCCCG 10104 29 96.6 36 ............................A AAACGGGGGGCCCGGCCTCGTCCGCCACGTCGAAGA 10169 29 100.0 32 ............................. AGGGAATGATGACGACGGGATCAGCGGCCTGG 10230 29 100.0 32 ............................. GACGACGAGGGCACGGTGGTCACGCTCCGGCC 10291 29 100.0 32 ............................. AGGTTGACGATGCCGAATGGCGCCCCAGCCTT 10352 29 93.1 0 .............G...........C... | ========== ====== ====== ====== ============================= ==================================== ================== 12 29 99.1 32 GTGCTCCCCGCACCTGCGGGGATGGTCCC # Left flank : CCGGCGTCGCCTTCCCTACGTCGTGCACCCCGGCGAGCCATACGGCCAACGCACGGGCGTCGGCGAACCCACCGGGAAGGGCCTGGGCAACGAGGCGCTTCACCTGCTCGGGCAACCACCGGTCCCAGAGCAGCCCGGCCGTGGCAGCGCTGTCGGACATGTGCCGCCAGAGGGGCAGGTAACCGTCATCCGCATAGGACGACTTGGCCCACGCCGCACGCGCCCCCGGGGACAGCCGCTTACCGAGCCGCCGCCCCCGTACTTTCTCCCCCACTGCCTACCTCCGCTGTTCCCGGCCCCGTCACACGCATGACGCCGGGCTCGAACACCGCCCCAACCGGCAGTATGCGCACGCGCGGAGCAGTCGTGGGGAGAGTTGACAATATGGACCGGAACTACTCAGCCTCGCACCCCTTCTGAGCTGTTGGTGAGGTATGCACCATTCAATGAAAGTGAATCCCACGGCCACCGGCAACGGATAAACCCGCAGGTCACCGAGT # Right flank : CTCCACGGGTCGGGCCAGCAGGGCAAGTCCAGGCCTGCGGAAACGCTGCGAAGGAACGTTTCCGCAGGCCTGGACTT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCACCTGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCACCCGCGGGGATGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 13172-12839 **** Predicted by CRISPRDetect 2.4 *** >NZ_LIQO01000381.1 Streptomyces albus strain NRRL B-2465 B2465_contig_381, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 13171 28 100.0 33 ............................ CACATACGCGATCTGGTACGGGCCGATCTTCTC 13110 28 100.0 33 ............................ GCCGGGCACCATCAGCGCCAGCAGACCGGCCAG 13049 28 100.0 33 ............................ CATGATCCCTTGCAGCTTCAGGCCGCTGTAAGC 12988 28 100.0 33 ............................ CCACTGGGGCGTGTGGGCGATGAAGGAGGAGGC 12927 28 100.0 33 ............................ CCGCGATTCCACGAGCCGGGTCCACGGGGCGGT 12866 28 96.4 0 .........................C.. | ========== ====== ====== ====== ============================ ================================= ================== 6 28 99.4 33 GTGCTCCCCGCACGCGCGGGGTTGGTCC # Left flank : GCCGTGGCCGCACTGCTGATGCTGCACCGCCTCCGGCTGAGCTGACCAGTCGGAGAAGTCGAAGACGAGGGGCGATCGAGTGCGCGGCAGCGGCCCCGACGTGTGGCAGCGGGGCGGGCCGCCTGACCCGCCTACCGGGTGACGGTGCCAGCCAGGTCAACGAGCAGCTGGGCCACAGCCACCAGTAGTGCCCACCGGCACCAGTCCACACGGCGTCGGTCCGCGCCCAGCTACCCACCTCCATGATCCGGTTCCCGGGACCGTAGAGCGAGGCGCGAGGTACCCGGAGCGGGGTATCCACAGGCAGGCCGGATCGTCATACCGGAGGCTCACCCTTTGGATAAAGGGCTCGTCGGACTGGAGGCTGACCAGCCCTCGCAGTGGCCCAGCTGGCACCCTTCGGCAGTGTTTCGACTCCTAATGGGAGAACGCCCGGAAGGTCCGAGTCGTGGGAAGTGGTTAGAATCGGCCCTCGACTGGCGAAACGCTGCTGGTCAGCT # Right flank : CAGGTTCCAGACGTCCGCGTCGGTGATGGTGAAGTGCCGCCCGTCCCCGCATAGTGGCCCCGCCGGCACCGCTCGGCGGGGCCGTCCATCCACAACAGTCAGCACGGTGGATAGGAGCACTCCCGAGCCTCCCACCACATACGGCCAGCCCCCGGAAACACGAGAACGCCCCGCCACCGACGATGGCGGGGCGCCTCCACACCAGGAGGTGCCGCTACCGTGCAGCGAGTTCGTACAGCGTCAGCACCAGCGCAGCCAGCCCGGTCAGCGCAGCGACCGACGGAAGAGGCCACCGGGCACGCTTCAGGTCCTCGACAGCGGCCCGCAGGTCGGTGATGTCCTGATCGTGGTCCTCGCGCAGCCGCCGCACGTCCTCCTCGGCATGGTCGGTGCGCTCCAGCACCACGTCCAGGCGCCTGCCCAGCCGCGCGAAACCTGCCTCGCTCGCGATCGCTTCTCAGCTGTCCTGAACAGCACGTGCACGTAGGCGCTCGTCGCCG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCACGCGCGGGGTTGGTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCACACGCGGGGTTGGTCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [31.7-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,4.91 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 5136-4652 **** Predicted by CRISPRDetect 2.4 *** >NZ_LIQO01000363.1 Streptomyces albus strain NRRL B-2465 B2465_contig_363, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 5135 29 100.0 35 ............................. GAGTCCTGGGCGCGGGGACCCTGCACCTGCCCGGT 5071 29 100.0 36 ............................. CCGTGGCCCTGGTCGGGTTCGGCCTCTCCTACCGCA 5006 29 100.0 36 ............................. ACCGGCTCGACACCCGCGTCAGCCTGGAGCGATACA 4941 29 100.0 37 ............................. TAGCCGGTGAACAGCTTCTCCGTGGTCAGCCACGCGA 4875 29 100.0 36 ............................. GCCGTGATGGGCCAGTCCCGCCGGGCCCGCGTGGAC 4810 29 93.1 36 ..........G.................T GTGGCCTCCGTCGAGGCGGAGGCGGAGCAGGCCCGG 4745 29 100.0 36 ............................. GGGGACGGCTCGGGCGGGGCGTCGACCCAGCCCATG 4680 29 89.7 0 ..........C.....C.......A.... | ========== ====== ====== ====== ============================= ===================================== ================== 8 29 97.9 36 GTCGTCATCAACCCTGGTGGGTTCGCAAC # Left flank : AACGGCCGCAAGCGATGACCACGCCAGCCCTCGTCATGCAACGCCCGGGCCAACTCCGCATCCGCTGCCCCGAGGACCTCATACGCCACACCCCGGGCAGCGCCGTGTACGTCCCGCCAGGCCATCTGCGGCGCATCGGCAGCAACATCCACCCTGATCCGCACCTTCTCCCCTCCCCCACAAGGCCCTTCGACCACCCGGTCCATGCTCCGGCACTGTACGCACCTGATCCCGCCTTTTGGGTAAATACGAAGATATGGGCCTCTGCTGCCAGTTCGCGTGCTATATGCACCCCGTGGCCGACGGCCTTGCGCCATGGGAGGGAACCTAACGTCTCCCACTGACACCGCTTATCCTGGCGGGCGGACGGAACGATGAGAGTTGCGCCGCGCCTGCCGACCGGCCGCCTGACCTGCGTGTGTGCACTACCGGCGGGTCGCTGCAGAACAGGCTTTGTGAAGCACGCCGAACCGCACGATAACCAGCGCCTTTACCCTGGG # Right flank : ACCCGAGTCGGTCGGCCTCGACGTGGCTGGAGTTCTGGTCATCATCACGGAGGGAGTCGGCCACCGGAAGAGACCAGTGCGGGCGACGCCACCCGAAGCGGGCTGGGAGGCCCCGGACTTGCTTGCCGCGCTCTCGGCGTGAGGGCCGCGGCTCTCAGCAGGCCCTCCCGCCGTCGCAGGACAGCGCGGGGCGCCAGCCGGCACGGCCGGTCTACGGCGTGCCGCTGGAGTCGGGTGGGGCCGGTCGGGTGAGGCGGGTGAGGTGGTCGCGGACCTCGCGTGCCTGGGGGTGTCGGCGGTAGGGGGCGAGGGAGCGCCGCAGGGCGGTGAGTGCTGTCGTGGTCCGGCGGGAGGACGTGTGCGGGTAGTGCGCGGCGGCCTGTCGACACTGGTCCAGCGCGGCCTCCAGTTGTCCGAGGTCCAGCAGCGTCCTGGCCAGTTGCGCGTGGGTGAGCAGGCGGGAGACGTGGTGTGCGGGTGGGCGTGCGGCCAGTGAGTCC # Questionable array : NO Score: 3.15 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCATCAACCCTGGTGGGTTCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.30,-6.30] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [35.0-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA // Array 2 13708-14793 **** Predicted by CRISPRDetect 2.4 *** >NZ_LIQO01000363.1 Streptomyces albus strain NRRL B-2465 B2465_contig_363, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 13708 30 100.0 36 .............................. CGAACCCCCACAGCCCGTGCACCGAGACGGCCACAC 13774 30 100.0 36 .............................. GGTACCTGGCACTGCATAACCAGTACGGGGGCGTTC 13840 30 100.0 36 .............................. CGGCAGACCCGGGCGTCACGGTGACCCCGCCGGGCG 13906 30 100.0 39 .............................. GACAGGCGCTCCATCAGGTCCGGGTCCCGGGCTTGGCCG 13975 30 100.0 40 .............................. GGGAGGAGAGCACCGGCGGCGAGTGGGCCGCGCTGGTCCT 14045 30 100.0 36 .............................. CGCATCGGCCCGCTCCGCCCGCACTGCCCGGTGCTG 14111 30 100.0 35 .............................. TCGAGGACGGCCCGCAGCGGTGTGGGGAGCCGGCC 14176 30 100.0 35 .............................. AAGCCCTACCTCCAGAAGCTCGGCGCCGGCGACAT 14241 30 96.7 35 C............................. CGCTGTTGACGGGGCCGTCCGTCCACATGCAGCCA 14306 30 96.7 35 .......G...................... CGACGAATGGCACAGCCAAGAGCGCGGGCAGGTCA 14371 30 100.0 35 .............................. AGCCGGTACACGCCAGTGGGCTGCCCCTGGTCGTC 14436 30 96.7 36 C............................. AAACCAGGAGGGGTCGAAATCCGGAACGGGTTCGCG 14502 30 90.0 34 T.......C..G.................. AGAACCCTGCCGTGCCGCTGACCAGCTCTTCCCT 14566 30 96.7 35 ...........G.................. GAGCGGGTCGGGCTGGCGGACTGCCCGGACTCCAC 14631 30 90.0 37 ...........G......G...C....... CCGTTGTCGTACGCCATCCAGCCCAGGAGGTACGTCT 14698 30 80.0 35 ...G...G...G...A......C....G.. GTGCACAGCTCGGCCGGGTCCGGGCACCGGGCCAG C [14720] 14764 30 80.0 0 A..........G........C.CG.C.... | ========== ====== ====== ====== ============================== ======================================== ================== 17 30 95.7 36 GGCCGTCATCAACCCTGGAGGGTTCGCAAC # Left flank : GAAGAACTCGCCACGACCATCTACCACCGTGCCCTCAAGCGAAAGGTCACCTACGAAGAACTCATCCACCTCGAGGCGCTGAAAATCGTACGTCTATGCCTCGAAGGAACCCCCTACAAACCCTTCCGCCCCTGGTGGTGACCCCTCATATTCATCATCCTCGTCTACGACACAGCCACCGAACGCAACCCCAAGGTCCTCAAAACCTGCCGCAAATACCTCCACTGGACCCAACGCAGCGTCTTCCAGGGCGAACTCACCAAGGCCCAGTACCGAGCCCTTATGACGTTGCTGAAAGACACCATCGACCCCGCCTACGACAGCATCGTCACCTACACCAGCCGATCACCCGACCTCATCGAAACAGCCACCCTCGGCACACACCTCGGAGGCCCCGGCGACATCCTCTGACCAGCACGTTTGCACTACCGCCGAGTCGCTGCAGAACACGCCGAAGCCGCCCGACGGAACTAAGCTCTGACCAGGGGCTTTACCCTCGG # Right flank : CGTGAACCCGGCCGCGGTCTCGACAGGTGTCTGCGGCCCTCGCTTGCCGTCAGGCAACGCACAAGGGTTGCTCGCGCCGGGCCGGCGGCTCCAGACACGGTGCCGCCGCGCCCTGTTCCCGGCCCACTGAGCAGCAGGCCTGAACAGGGCGCGGCGGGCTTCGCGTATCAGATGTCGCGGAACGTTTCGATCTGCGCGCCGACCTCGTTGAGGCGCTCCGCCAGGTCCTCGTAGCCGCGGTTGATGACGTACACGTTGCGCAGCACCGAGGTGCCCTCGGCCGCCAGCATGGCCAGCAGGACGACGACGGCGGGGCGGAGGGCGGGCGGGCACATCATCTCGGCCGCGCGCCAGCGGGTCGGGCCCTCGACCAGGACGCGGTGCGGGTCGAGCAGCTGGAGCCTGCCGCCGAGGCGGTTGAGGTCCGTCAGATAGATGGCCCGGTTGTCGTAGACCCAGTCGTGGATGAGGGTCTTGCCCTGGGCGGAGGCGGCGATGGC # Questionable array : NO Score: 2.94 # Score Detail : 1:0, 2:0, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.89, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCCGTCATCAACCCTGGAGGGTTCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.20,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-21] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-30.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 3024-2688 **** Predicted by CRISPRDetect 2.4 *** >NZ_LIQO01000483.1 Streptomyces albus strain NRRL B-2465 B2465_contig_483, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 3023 29 96.6 32 .............T............... TGCTCGACCTGGGTAGCGGTGTTGTCGCGCAT 2962 29 100.0 32 ............................. GACGGCACGGCCGCGTCCGGCGCGGGGTACGA 2901 29 96.6 32 .........................C... GCTTCCTTCGAACCCTTTTCGAGGGCCCTCCG 2840 29 96.6 32 ............C................ TGCGTGCCGATGACCGCGGCGCCAGCTGCCGC 2779 29 100.0 32 ............................. CGGCCGATGAACTAGGACTCGGGTTCTTCGGG 2718 29 75.9 0 ............CC...CA.A.C...T.. | CC [2698] ========== ====== ====== ====== ============================= ================================ ================== 6 29 94.3 32 GTGCTCCCCGCGTATGCGGGGATGGTCCC # Left flank : ACGCCGCTACCCAGGTCGAGCAGGGACCATCCCCGCAAACGCGGGGAGCACACTCGGTGACCTGCGGGTTTATCCGGCGGGGGCCGCCGTGGGGTTCACTTTCGTTGAATCGGGTATACCTCTCATTTCGGACCCCCGCCGAACCGGCGGGGGTCCGAAATGAGAGGTATACCCGATTCAACGAAAGTGAACCCCACGGCGGCCCCCGCCGGATAAACCCGCAGGTCACCGAG # Right flank : TCGCGCGGGCGAGGCTCGGCACCGGGACCACTTCAACGCATCAGTCCGCCGCGCAGGCTCCTCACCCGTCGCCGCTCGGCAGTCGATCAAACACGACGTCAGTGGGGTGGTGCTGTGGATGCGGGTCGTTGCCCCAGCGTTGCTCCGACCCTCATCGTGCAGGAGGGCCCATGTACCTGCCCTCTTCCGTGCTCGCGCAGTTGTCGGACTCCCAGATGGGACCTGGAAAGAGCACTTCGCCAGCGACGGTCACGAGGCGTCCCCGCAGCGTCGAGGCAGGCATTGGGCGCCGCACTCAGGCCCCGGCCAACCGCGAGCAGTCCGGAGGGAGCGAGGACGCAGCCAGCCGCCGTCGGCGGGTTCATCGGGCGTTTGTGTCAGCCCACCGGCTCGTCCTGCATCTTGCCTGTGGTGCGGTCGGTGCCGAGGACGTAGTCCTCCCAGGTCTCGTCGTACGCGAGCCGACCGCCCGGCAGCTTGGTGGCCTTCACGTGTCTCAT # Questionable array : NO Score: 5.88 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTATGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCATGCGGGGGTGGTCCC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [31.7-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //