Array 1 30084-29651 **** Predicted by CRISPRDetect 2.4 *** >NZ_ASAN01000043.1 Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 strain ATCC 13253 contig00043, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 30083 47 100.0 30 ............................................... CAGCCGTCGGCATGGCCGCCCAGGCCCAGG 30006 47 100.0 30 ............................................... TAATCTTCTAGAATAGTAGTTGGAGATTTA 29929 47 100.0 30 ............................................... GAAGACGAAGAGGGCGCAAATTTCGATCCG 29852 47 100.0 30 ............................................... CAATTAAAGAGAGTTAAAAAATCAGAAGCT 29775 47 89.4 30 ..................T....T..A.....A.....G........ ATTCTGAGGGCTACTTTGACGTGACCAAAA 29698 47 74.5 0 ..................T....T..A......G..G.TAGA.T.CT | T [29658] ========== ====== ====== ====== =============================================== ============================== ================== 6 47 94.0 30 GTTGTGCAGTATCACAAAGATACAGTTAAATGTAAGCAATTCACAAC # Left flank : AAAAAGTATGTCTTGAAGAAATTAAAAAA # Right flank : AAGGAAATTTTACAAATCATGGATTAAATGTTATATTGAGGTCTTCATAGATATTTAGAAACCTCCTATATTTGCAACAAACCTTTCCATGCCCTTAGAATACCGAAAATTAAAACCTTATGAAAGCAGAATTTACAGAGAGATTCGCTTGGAGAGTCTGAAGAAATTTCCTGAAGCTTTTGAGGCAGATTATCAGGATGCGTTGAGAACTGAGAAACTTCGATTCGAGATTGATATTGAAAATCAGGAAACCGACAGATTTATAATTGGTGCATTTTATGGGAATGAGCTTATCGGTATCTGTGGTTTTGTAAAAGATGAAAGTGGCATAGGAAATGTATTTCAGATGTATGTTAAAGAAGAATATCAGGGGAGAAACATTGGTATGGCGCTTCTTCGTACGGTTATAAAGGAAGCCGATACAAAAGAAATTATACTGGAAGTAAAGCCAGATAACTTAAGTGCTTTTCATTTGTATCAGAAAGTAGGGTTTAAAGAAA # Questionable array : NO Score: 2.96 # Score Detail : 1:0, 2:0, 3:0, 4:0.70, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGCAGTATCACAAAGATACAGTTAAATGTAAGCAATTCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.96%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-4.60,-4.40] Score: 0/0.37 # Array degeneracy analysis prediction: R [18-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 1 309-31 **** Predicted by CRISPRDetect 2.4 *** >NZ_ASAN01000044.1 Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 strain ATCC 13253 contig00044, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 308 47 100.0 30 ............................................... TGAGCAAACAATAATTGAAATATTCAAAGA 231 47 100.0 30 ............................................... TATTGTCAGATGATTGGAAGATATTTTGGA 154 47 100.0 30 ............................................... CGAAGATATTCAAGCAAAAGATGAAGTTTT 77 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 4 47 100.0 30 GTTGTGCAGTATCACAAAGATACAGTTAAATGTAAGCAATTCACAAC # Left flank : ACAAGCTAACCCGCCCCTTAATGGTTGCGGTTAAGATGACCGTGATCTCTCTGTATAAATGTTATACGGGAGAAAAACGTTTGATTTCTTACCCGGAGCTGGTATGAAAGAGGACCGTTTTAATGCATACCGGATTATGTGGGTTTTAGTATTATACGATTTACCAACCGAGACCAAAGCCAATATGCGGGATGCATCGCAGTTCAGGAAACGCTTATTGGATGATGGCTTCTCTCTTTTCCAGTTTTCTATGTATGTCCGCCATTGCCCCAGCAGGGAAAATGCCGAAGTCCATATTAAAAGAACAAAAGCCATGCTGCCGAAGGCCGGGAAAGTAGCTATTATGTGTATTACGGACAAGCAGTTTGGGGATATAGAGATCTTTTTTGCCAGAAACAGAGAAGAACCCCCACCAACCTTCCAGCAATTGGAATTATTCTGATTTTTTGAATCCTAAATTAATACAAAATCCGCTGAATATCAGCGGATTAAATTTTGAG # Right flank : CTGGATCTAAAGAATACATAAAAAAACAGCG # Questionable array : NO Score: 2.86 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGCAGTATCACAAAGATACAGTTAAATGTAAGCAATTCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.96%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-4.60,-4.40] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [35.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA //