Array 1 10003-6680 **** Predicted by CRISPRDetect 2.4 *** >NZ_NFZP01000016.1 Cellulomonas iranensis strain SID13905 NODE_16_length_50418_cov_318.368_ID_31, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 10002 28 100.0 33 ............................ CGCGGCCGGCTGCGGCGCCTTGAGCATGCCGCC 9941 28 100.0 33 ............................ GGTCGCCATGGCGACGCGGCCACCGCCGAGCCC 9880 28 100.0 33 ............................ GAACCCCACCGACCGGCCGATCTACGCGACCCT 9819 28 100.0 33 ............................ CGTTCAGCGGGTCGACCTGACGCCGATCGAGGA 9758 28 100.0 33 ............................ CGCTGCACCCGGCGCAGGTGCATCACGACGTGC 9697 28 100.0 33 ............................ CGGGGTCGCCCGCTACCAGGAGAGCGACCTGGT 9636 28 100.0 33 ............................ CGCGCCCGCGCCGGCGGCCAGGCCGCCGAGGGC 9575 28 100.0 33 ............................ GCGTCGCCGGGGATGGTCCCCACGTGTCGACGC 9514 28 100.0 33 ............................ CCGCGCGACCTTGAGGTCGCCGCGAGTGGCTTC 9453 28 100.0 33 ............................ CCTGACCCGAGACCGTGCCCACCGGGAGCGTCG 9392 28 100.0 33 ............................ GTAGAACAGCCGGTTGCGGCCCCAAATCTCGTC 9331 28 100.0 33 ............................ CTCCCTCGACACCTATCCGGCGTGCCTCGAGCA 9270 28 100.0 33 ............................ CCAGGCCAACCCCACCACCGCCGACCGCGACGA 9209 28 100.0 33 ............................ CGGGTGCTGCGGGTCGTCCTCGTTGGTCCCGAC 9148 28 100.0 33 ............................ CGCGACCACGTTCGTCTACATCTGAGAGGGGGA 9087 28 100.0 33 ............................ CGCCGCGCCCGTCGCGTCGCCCTTGCGGCGGTA 9026 28 100.0 33 ............................ CGTCTGAGCAGGCGCGCTCACCACCACGCCGCC 8965 28 100.0 33 ............................ CACTGTTTCGACCACGGTCGACAACACGATCAA 8904 28 100.0 33 ............................ CCGCCCCACGCCGTTGTTCAGGCCGTAGATGCG 8843 28 100.0 34 ............................ CGCCGACGCCATCGCGAAGGTCAAGGCCGCGACC 8781 28 100.0 33 ............................ CCCGGACACGCCTGACCCGTCCGCACTCCCTAC 8720 28 100.0 33 ............................ GGAAGACGTGGCCCGGCTCGAGCGGGAGTTCGC 8659 28 100.0 33 ............................ GTTCATCGCGAACGCCACCGGCGACGAGCTCGC 8598 28 100.0 33 ............................ GGCGATGACGACGCGTTGGCGCTGGTTCTCCCA 8537 28 100.0 33 ............................ CGACAACCGAGTTTCCCGCGCATTCGTCGCGCT 8476 28 100.0 33 ............................ CGAGGCGGAGGTGTACGGACGGCGCGCTCCGTG 8415 28 100.0 33 ............................ CACCGGGCTGGCCTACCTCGTGGGCCTCGAGAT 8354 28 100.0 33 ............................ GTCGTCGTCACGCGGGGTGACGGCGGCGTCCCG 8293 28 100.0 33 ............................ GGCGTGCTCGCGATACGGCAGCACGAGGTCGGG 8232 28 100.0 33 ............................ GAATTCGTTCGACGAGGCGACCGGCGCGATCAC 8171 28 100.0 33 ............................ GGAGGTCAAGGCGCCGAGTCGCAGCACGCTGTG 8110 28 100.0 33 ............................ CATGTGGCTTCCCTTCTCGGTTGTGGGTCTCCG 8049 28 100.0 33 ............................ GTTGAGGTTGAGGAGCTCGACGTGCAGCGCGAG 7988 28 100.0 33 ............................ CTGCGCGTAGTCCGCCTCGGACAGCGGCAGCTC 7927 28 100.0 33 ............................ CGACTCCGCGACCGGTGAGCAGGAGGCCGCCGA 7866 28 100.0 33 ............................ CACCGCGCTCGACCTCGCGGGGTCGAGCCGGTT 7805 28 100.0 33 ............................ GTCGTCGGAGAGGCAGAGGACCCACAGGCCGTC 7744 28 100.0 33 ............................ CGGCAGCCTGTTCGCCTGGCTCGGCGTCCAGGA 7683 28 100.0 33 ............................ CCCGCTCACAGACCCCGCGACGAGTCACCGGGT 7622 28 96.4 33 ...................A........ CGCGTGCCCGGCGGGCCTCAGCCTGCCGGGCAC 7561 28 100.0 33 ............................ CTGGGTGCTGCCTGCTGGTGGTGGCCCGGTCGA 7500 28 100.0 33 ............................ GCACCCCAGGGGGGGCGGCATGGCAGGGCGCAG 7439 28 100.0 33 ............................ CGTCGACGAGCCCCGCCCCGCCACGCTGGAGCA 7378 28 100.0 33 ............................ CTCCTGGAAGCCCACGACCCGCGGCTGAGCCGC 7317 28 100.0 33 ............................ CGCCGCGCCGGTCGCGTCGCCCCGACGGCGGTA 7256 28 100.0 33 ............................ CGGGAACCCGATGGACGTGTACTTCTGCATCGC 7195 28 100.0 33 ............................ GTGCGCCGGCTGCAGGTTGGACGGCTCCCACAG 7134 28 100.0 33 ............................ CCCGGCGAACGACAGGCCGCCCAGGTCGAGGCT 7073 28 100.0 33 ............................ GGAGGTCTGACCCCATGCGCACCCTGCACCGCG 7012 28 96.4 33 .......T.................... CGACGCCCACGACAGTGGACGTGGCTGCCCTGG 6951 28 100.0 33 ............................ GGAGCGCGACGGCCAGGCGCGGCGTTACCCGCC 6890 28 100.0 33 ............................ CGTGACGCGCCCCGACCAGCCGGGGTCGATGAC 6829 28 100.0 33 ............................ CTGCACGCCGCCGGACGGGTAGGTCACCGGGTC 6768 28 96.4 33 .....T...................... TTTGTACGCCTTCGATTCGTGCGGCGGCGACCC 6707 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================== ================== 55 28 99.8 33 GTCGTCTCCCCGCGAGCGGGGATGAGCC # Left flank : ACAGCAGACCAGCCACGTCAGCGGCGTCGTCGAGATGCCGCCAGACCGGTGCCCAGCTGTCAGCCGGCACGTCGTGCGGCCACGACTTCGCCCACGCGACACGGCACAGCGCCGTCGTCGCCGGGTCGACTCCCTGGTCCGCCACACCGCCCCCTGCCACGGCCTCCGTGCCGCCTCGCGCACGACCGTAGGCCTCGCGACCACGACGCACTGGGGAATGGACCCGGGGTCACTCGATCGGACGCAACGGCGCACGGGTCGCGGCCTGACCGCTAGCAGGGCGTGCGACGTAGCCCGCGCGAGCCCGTCATCTCACCGTTCATGGGCAGGTCTCCGACTGCGCCCCGGAAGACCAACAACCGACCACGCCAGGTCCCGGTCCTCGGCTCCGGCCCGCGAGTGGCAGGCAGTCTCCGCGGGGACGGCGAGCAGGAGGCATGGCGTCCTCCGAAGTGATGCCAGAAGCGCTTGCGTCGGTGTGTTGTTGCTGGTCAAGATGT # Right flank : GGGACGCGACCGGTCGGCGTACGCGTCGAAGAGCTGCGTGCCCACCGGTCGGCGACGGGCGAGCTTGTGCGGATTCGTCTCTTCGCTGGACCCGACCTCCGCCCGACCGACAGTTTCCGTCGCCGACGGACAGGTTCACGGCTCGACGGACACGTGTACGCGCCTGTCCGTGGAGCCGTGACGGTGTCCGTCGCCGGGCGGGGGTGTGAGGAGCGGACGAGTCAGGCGGTCGAGACCGCTGCCGCGGGTTCGGACGCAGCACGGTCGAACCGCGCCCCCGCCGGGTTGCTCGGCAGCGCCAGCAGCACCAGCAGCGCGAGCGCACCCAGCCCGGGGACGACGGCGAGCAGCAGCCACCAGGCGGGCAGGTTCGCGTCGTGCAGGCGGCGGGCCGAGACCGCGAGGAGCGGCACGAGCGTGACGAGCACGTAGAGCGTCAGCAGCGCGAGGACGATCAGCACGCCGAGCACGGGCCCGGGGGACAGGCCGAGGTCGCTGGA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCTCCCCGCGAGCGGGGATGAGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCAGCGGGGATGAGCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-10.50,-10.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [23.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.18 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 12814-17231 **** Predicted by CRISPRDetect 2.4 *** >NZ_NFZP01000016.1 Cellulomonas iranensis strain SID13905 NODE_16_length_50418_cov_318.368_ID_31, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 12814 28 100.0 32 ............................ CGTCGAGGCCCGTCTCGACGACTACGCCGCGC 12874 28 100.0 33 ............................ CGTCCTCGTGTGGGATGTCGACCCGGAGACGGG 12935 28 100.0 33 ............................ CCGCTCACCCGCGGCGCCGGCGGTGTACCCGGT 12996 28 100.0 33 ............................ CAAGTATGGGACGGGGATGACGCCGGACGATCG 13057 28 100.0 33 ............................ GTTGCACGCCTTCGACTCGTGCGGCGACGACCC 13118 28 100.0 33 ............................ GCCCGCTGCGAGGTTCGCGACGCCGTCCGCCCC 13179 28 100.0 33 ............................ GGTGAAGGTCACGGCCAAGTCGGTCGACGGTGG 13240 28 100.0 33 ............................ GTGCTGCTCGCCGTGCGGGCGCCGGCGCAGCCG 13301 28 100.0 33 ............................ CGCGTTGACGAGGTCGGTGCCGGACTGCACCAG 13362 28 100.0 33 ............................ CGAGGGCGGCATGCCCTCCGGTCGCTAGCGACT 13423 28 100.0 33 ............................ GCGCGGAGCCCCCCTGGCCCAGCGGGGTGCCGA 13484 28 100.0 33 ............................ GTTGATCAGCGGGTGAAGTCCGTGGTAGGCGGG 13545 28 100.0 33 ............................ GCGCACCGCCGCCGGCGCCGTCGAGGTCGCACC 13606 28 100.0 33 ............................ CCAGACCTGGGGCTCGTACAACGGCGCCCTCAA 13667 28 100.0 33 ............................ GTGCATCTCGTCCGCGCGCCCGCTGTAGTCGCC 13728 28 100.0 33 ............................ ACGGACTTGAGCGAGTCGTAGTAGAGCACTCCG 13789 28 100.0 33 ............................ GCGCCGTTGTTGCCCAGCTCGACGAGCGCCGAG 13850 28 96.4 33 ....................A....... GTGCCGCGCGTGCTCGGCGACGGCGTGGGACCA 13911 28 100.0 33 ............................ CGACTCGAGGTTGGACGCCGCGTTGTCGCCGAG 13972 28 100.0 33 ............................ CCACGTCGTCTGCGTCGCGATGTAGATGATGGC 14033 28 100.0 33 ............................ CCCGACTGCCGCCTCACAGAACGGGACCATGGG 14094 28 100.0 33 ............................ CAACGTCGAGACCTTCGCGATGCGCGTCGCGCT 14155 28 100.0 33 ............................ CCCCGACGTGTTCACTCGCGGCGGGTGGCAGCC 14216 28 100.0 33 ............................ GGCCTTCCGCCCCACGAAGCCGCTTCCCACCGC 14277 28 100.0 33 ............................ CTCCACCGGCTCGACGCCACTACCGGCACCCGC 14338 28 100.0 33 ............................ CGGGCGCGCCAGTGTTCGTCTCCCCGCAGCGCT 14399 28 100.0 33 ............................ GGATGATCGCATAGCAGATTGCGGTCGCGGCGG 14460 28 100.0 33 ............................ GACGATGTCCTCGGTCCCGAGGCCACGCTCGAC 14521 28 100.0 33 ............................ CTGGTCGCGGATCGCCGCTAGCACCTCCGGCGA 14582 28 100.0 33 ............................ CGGGCGCGTGCAGTACGCGGCGTGGTAGAGCGC 14643 28 100.0 33 ............................ GGCGAGTGGCCTGGTCGCGCAGATCATCGGCGA 14704 28 100.0 33 ............................ GCAGTTCGACCTGCGCGACTGGCTCACGCCCGG 14765 28 100.0 33 ............................ CACCTGCCCGGTCCCCGCGTTCGCGGCGGGGGA 14826 28 100.0 33 ............................ CGACTCGGCGCCGTACTGGCCGACCGTGACGAT 14887 28 100.0 33 ............................ CACCACGGTGAGCCTGGTGACCGATGACGGACA 14948 28 100.0 33 ............................ GTCGTCGTCGCCGTCGGCCGATGCACCCGGCAT 15009 28 100.0 33 ............................ CCTGCCGTTCGTGTACCGCGTGGTGGCCGGTGG 15070 28 100.0 33 ............................ GTACGGCGCCGGCGTCCCAGTCTCGCCGTACGA 15131 28 100.0 33 ............................ CGGGCCCGACCCGGTCTTCGCCCAGGCGGCGTC 15192 28 100.0 33 ............................ CCGCGTCGGTGCCAGGCCGAGGCCGAAGCGGCC 15253 28 100.0 33 ............................ CGCGGTCAGGTACGCCTCCGTCGTCAGACGGCG 15314 28 100.0 33 ............................ GCCCTCGCGGACCGCTAGCAGCTCAGCCAGCGG 15375 28 100.0 33 ............................ CATCACGGGGAACGTCGTCCGGCAGTCGATCCT 15436 28 100.0 33 ............................ CTTCGACGGCCGGACGCCCCACGCGCGCGACGC 15497 28 100.0 33 ............................ CTACCTGGCTGACCCGGCGCCGACGACGCTGGC 15558 28 100.0 33 ............................ CGCGCGCGCCCCGTCGAACGGCGCCGACGCCTG 15619 28 100.0 33 ............................ GCCCTCCCAGTCACCCAGGAGGTTGTCGAGTCG 15680 28 100.0 33 ............................ CGGGCTGCCCCGCGAGCCCGCGGTCAGGTCGGC 15741 28 100.0 33 ............................ GCCGGGCCAGATGATCTCGAGGTCCGACGACAG 15802 28 100.0 33 ............................ CGCGCGCGAGCGGATGGCGGACATCCCGGAGCT 15863 28 100.0 33 ............................ CCGGGGGTGCATCCCCGGCGTCCGTGCGGTCCA 15924 28 100.0 33 ............................ CTCGATCCGCATCCCGACGATCGCGTGGGCCAA 15985 28 100.0 33 ............................ CGTCGGCGCCGGCGTCCTCCAGGCGGTCGGGAA 16046 28 100.0 33 ............................ CCACACCCGGTCGCTGCTCACCCAGCGCGTCAC 16107 28 100.0 33 ............................ CGCAGCCACGTGCGCAGGCGGGCGATCACGACG 16168 28 100.0 33 ............................ CGCGGGGACCGCGACGGCGTTGCCCATCTGCTT 16229 28 96.4 33 ...G........................ CCGGTGGGCCGTCGGGATCAGCGCGGCGGTGCG 16290 28 100.0 33 ............................ CAGCGCGAACGAGGACGACTACAACGACCTCGT 16351 28 100.0 33 ............................ GGCGGTCCACCAGAAGATCACCGGCACGGGCCT 16412 28 100.0 33 ............................ CTCGTGGATCCTGGCTGACCTCGCCATGCAGTC 16473 28 96.4 33 ............T............... CGAGGGACGCCGGGGCGACTCGGCGCCCCTGCC 16534 28 100.0 33 ............................ CAGCATCCGCATCCCGACGATCGCGTGGGCGAA 16595 28 100.0 33 ............................ CGTCACCAAGACCGAGGGCCGCCAGAACGCCGC 16656 28 92.9 33 .C......G................... GGACTCGACGGCGGGTACGAGCCCGCAGGATGC 16717 28 100.0 33 ............................ CTCGGCGATCAGCTCGTCGTCGTCGACTGGCTC 16778 27 96.4 33 .....-...................... CGCGTCGGTCCCCGCGGGGACCTCGACGCCGAT 16838 28 100.0 33 ............................ CCGGGTGACCGGGCACTCGGTCATACCGTGCGC 16899 28 100.0 33 ............................ CGAGGCGTCATGGAGCACGGCCGCGCGTAGCCG 16960 28 100.0 33 ............................ CGGTTGGTTCTGAGTCAAGACGCGCTGCGCGCG 17021 28 96.4 33 .........................A.. GTGGGTCAGGGCAGGCAGCTCGTGGGGGGCGAT 17082 28 92.9 33 .........T....C............. GGCCGTCGTGGAGATCTCGATCGACCTCGGGAC 17143 28 89.3 33 ....A....T....C............. ACTTGTGATCGCGTGCTTCGGCTGCAGCTGCCG 17204 27 75.0 0 .....C..T....-.....C.T..G..A | A [17220] ========== ====== ====== ====== ============================ ================================= ================== 73 28 99.1 33 GTCCCTTCCCCGCGTGCGGGGGTGAGCC # Left flank : ACCACCACGAGCTCTTCGACCGCGCCGTCCTCAACGTCGCGCTCGGCAACACCGACGACCACCTGCGCAACCACGGCTTCCTGGCCGAGGGCACCGCGTGGACGCTCAGCCCGGCATTCGACGTCAACCCCCACCCGGACCCCTGGCGGCCCCGCGCCACGTCGATCATGGGAGCCGACACCCTGCCCGATGAGGTCGACGGGCTGATCGGCCTCGCCGAGGAGTGCAGCCTGACCGTCCCGCAGGCCCTCGCGAGGATGGACAACACGCTCCGAGCCCTGACGGACTGGCGCGACGTCGCGCGCAGAAATGGGATCAGCGAGAAGGAGACCACCCTGATGGACGATGCGATCGGGAGACGACTGGAGGCCCTCCGGACCGCGCTCGGCACCGAAGGCTGACCGGAAAGGTCATGCCGTCGCGCAGCAGGACACGTCTCGCGAGCACCAGGAGTGAACGAGAATCGGGTTGGATGGCCGCGGATGCGCTGGTCACGAAGT # Right flank : ACTACCCACCACGACGGTGTCGGGGTGAGTGTCAGGAAGGCGAGGCGGCGCGTGCGTCAGGCGTGTGGCGGCGCCACGAACTGCCACCCGCGCTCGCGCATCAGCGGCACGAAGCGTGCGACGGCCGCGACGGTCTGGCTGCGGTCGCCGCCGCCGTCGTGCAGCAGGATGACGCCGCCGGGGGCGACGGCCTCCATGCGGCGCACGAGCTCGTCGACGCCGGGCGGCACCCAGTCCTCGACGGCGGTGTGCCAGCCCATCGAGCGCATGCCGAGGCCCGCGGCGACGTCGACGGTGGCGCCCCAGGACCCGAAGGGCGCACGCCAGTAGGGCACCGGCGCACCGGGCACGGCGGCACGGATCGCGTCGAGCGTGCGCGTGAGGTCGGCGTGCACGGCGTCGGGTGACGCGTCGCCCAGGTCGTCGTGCCGCCACGAGTGGTTGCCGAGCACGTGACCGTCGGCGGCGATGCGCGCCACCAGGTCCGGGTGCTCGACGAC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCCTTCCCCGCGTGCGGGGGTGAGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-9.40,-9.30] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-19] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA //