Array 1 1369542-1372115 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP009286.1 Paenibacillus stellifer strain DSM 14472 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 1369542 32 100.0 37 ................................ CCTCCATATCCAGTATTCAGGATTGCGGTACAAGAAT 1369611 32 100.0 34 ................................ TTATCGACCTTGCAGTGTCTTGATACCGGAAATC 1369677 32 100.0 34 ................................ CGATACACCCTTTACGGGATGCTTCGTAAACACA 1369743 32 100.0 32 ................................ ATCTGTCGGTATCGGTTTGATCAGCATGTTCG 1369807 32 100.0 34 ................................ ATTCCGCTACTTGGAGAATTCCTGTCCGTACAGT 1369873 32 100.0 37 ................................ CTCTTCCGCGAGGAACAAACGTCATTCGGCAGCGGAA 1369942 32 100.0 36 ................................ CATTCAAAACGGTTGATGCAGGAAGCGCGCTATCCG 1370010 32 100.0 34 ................................ TTGTTGTCCGGCTTGGCTGTCGGCCCGAGAACGG 1370076 32 100.0 34 ................................ AGTCCGTTGTTTAGCGCTATATTTCCGGGATATA 1370142 32 100.0 37 ................................ ATGTCATACCCGGAATCAACAAGAACGAAATCACCGG 1370211 32 100.0 33 ................................ GCTCCGCCTCGGATTGCTTTCATCAGCGCGGTG 1370276 32 100.0 34 ................................ CAAAAGCCGTCCCTACTTCGGATAGGGCACTTCC 1370342 32 100.0 33 ................................ TCCCTCCCCGTCCGCAGGAAACGACGCGTTTTT 1370407 32 100.0 37 ................................ TTTCGATGGATAGCTGCCGCTATATCCTCTGGCTGTC 1370476 32 100.0 34 ................................ CGAAAGTCCGCTTGACCTCCAAGGTTCGTCTGCT 1370542 32 100.0 34 ................................ CACACTGGCGGTTGCAGGACCCGGCGAACAGACG 1370608 32 100.0 35 ................................ CACAATGCCACGTCCTCCGCGCTGCGGCTGATGGT 1370675 32 100.0 35 ................................ CTTTTGACCCGCATGACGGGCAGTTCGTCGTCCTC 1370742 32 100.0 35 ................................ CTGATAACGAGCTTGGAGAGACTTGTGTAGCACTT 1370809 32 100.0 33 ................................ TTTGATGTCTGCATGGCGATATATGGCGATGGC 1370874 32 100.0 36 ................................ GAGTGGCGACATGCCTAGCCAGTCCCGGACCTCGTT 1370942 32 100.0 37 ................................ ATAAGCAACAATGTGCAGAATAGTACAAATAAATGGC 1371011 32 100.0 36 ................................ TTATTTTGGAGGAATGCAGATGTCCGAGTTAACAAT 1371079 32 96.9 35 ..........A..................... CGCTTGCCGGTTGCCTTCTTGTAGGGCGGCTGCTC T [1371089] 1371147 32 96.9 35 ..........A..................... GATTTTCGCGCCGTCAGCGATTGCAGCAGCGGTTG T [1371157] 1371215 32 96.9 35 ..........A..................... ATGTAATACATAGTGCCTCCTAATCTGCAAAACTG T [1371225] 1371283 32 93.8 36 ..........A...........A......... ATAAGTTGTCCAATTTCAAACAGATTGAAATTGAAC T [1371293] 1371352 32 96.9 35 ..........A..................... CTTTTGCTCTGGTCGGAATTTAGTTTGCTTAGTTT T [1371362] 1371420 32 93.8 32 ..........A...T................. ACCACGTTAACAGCGTGTAAAATCTTATCATC T [1371430] 1371485 32 96.9 34 ..........A..................... TCATAGTGCTTGTCCGTCCCTCGGTACACGACGG T [1371495] 1371552 32 96.9 33 .............C.................. AGTAGCCATACAGACACTCCTTTACTTGAACAG 1371617 32 96.9 34 .............C.................. CCAAGCTCTTACCATTACTTTCTTCATCGTCTTT 1371683 32 100.0 33 ................................ TTCAAGGAGACGACTCGGATGAGTCGGATTGGG 1371748 32 87.5 35 .........TTC.G.................. TGAAACAGACTCTGTGTACTCGGCATCGAAGGATC 1371815 32 90.6 37 .........TA.................T... GGGCGGAGTGTGATGGTAAGCTTCGAATGGATGGCTG 1371884 32 90.6 33 ..........A.TC.................. ATTTCCGTCACAATAAACGTCTTCATGGTTTCA 1371949 32 90.6 36 ...A...........A............T... ACGTAATCACGGGCGGGATTTTGAGGACCTTATCGG 1372017 32 93.8 35 ....T..................A........ AATGCGGATCAGTTCGTTGGTCAACACACAACGGA 1372084 32 75.0 0 .........TTC.CA.T.A.A........... | ========== ====== ====== ====== ================================ ===================================== ================== 39 32 97.3 35 GTCGCACCCCGTGTGGGTGCGTGGATTGAAAT # Left flank : GCAGATGCGCGGCAGCTTCCAGCCACCGGTGCTGCTGGACGGCCGCATGATCATCGAAGGCCGCGTGCCGCTGGCGACCTCGCTGGAGTATCCGCAGGAGCTCAGCTCTTTTACCAAAGGGCGCAGCACCTTCACCTCATTCTTCGACGGCTACGAGGAATGCCCGCCCGACGTGACCGCCGAGCGTACGCGCCGGGGCGTGAACCCGCTGGATCAGGCGAAGTATATCCTGAGCGTGCGCAAGGCGCTGCAGGGGTGAGACGAAGATGGATGGGGCCTAGTACATATTATGTATCGGGAGAGGGTGCGCCGCTCGTTGAGATGGGCCATTGGTGCGAACCCCAAGCGCCCATGAAATTTCCGGGGGATTCGCACCTCTTGCGGGATAAGGGATTTTGCGTTATTTTGAGTAAAAGGCGGCCTTAAATCCGGTCCGTTCGGCGGGGTTCGCACTATAGCGCTTCCAAATGCCCGCCGGGTAAGGCGGGAGAGTGGGGGCT # Right flank : TATTATGTAGTTCAATGACGTTTATGTTCAAATTAAATTCACTCAAAAAATGATTGTGTATTTATGAGGTTTCCTGCACATTTCTATAAAAGTAGGGGTTTCTACTACAACTTCATGTAGTGTTGAGCTCCCGTCTCTGAAATGCTCAACGTAAATGGAAGATTTCGGATTTTGACGCATTCTCGCAATGCTATCAGGTAGAGTAAGACCTGTTTTGACGGCATGAAATAGTGTTACGTCTTTGCTCAAGTAGGAGATCGGAGGAGTTTGTGGAACCGACAAAGCTAAGTTTGGAGAATTTGCTTCTCTCAGTAATCTATTTTTCAAAGAAATAACGCAAAAATCGCTTGTTGCAATAGAAATATTAGAAATCTCATTTCGGTAATGAGAGAGTAAGAGGAAGGCTAAAGTAAGTATGGAAACCTCACCAGCATTTTTCTTTGTAATCAAAGTTTCTGTTTGTCTGGTAAGGAATCCATTTTCATAATATAAGTCTATCC # Questionable array : NO Score: 9.12 # Score Detail : 1:0, 2:3, 3:3, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCCGTGTGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCATCCCGTGTGGATGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.20,-4.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-57] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,1.01 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 1376916-1378754 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP009286.1 Paenibacillus stellifer strain DSM 14472 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 1376916 33 100.0 35 ................................. CTTCTGTTCATGAGAATAAGCCCGGCTCAATCGGT 1376984 33 97.0 35 ................................C GTTGATTACGCGGAGGGGTTGGCGCTTGATTATGC 1377052 33 97.0 34 ................................C GCGAGAATGGCCGCATATTTGACCGCGATTGGCT 1377119 33 97.0 35 ................................G ATAAGGCCCGTCGTAGCGTCCGGAGCATCGTCGTG 1377187 33 100.0 33 ................................. AGACTTACAAGGAGCTGCCGCGCGACCCGGACA 1377253 33 97.0 36 ................................C ACGTGAAACATTTGTCGAAGGTTCCGGGGTTTTGAT 1377322 33 100.0 33 ................................. AAAAATCGTGAATATCCCCGGCATCGGGGCAGC 1377388 33 97.0 35 ................................T CTCGTCCGAATCGGGTATTCCCCAGCAGGGCCTGT 1377456 33 97.0 35 ................................C CAGTCTTGTTCGTCGTACCAAAAATAGTCTCCGTA 1377524 33 97.0 34 ................................C TCAACCTCAAATTTGTCTACACTTGGACGTCCAG 1377591 33 97.0 32 ................................T CCAGAAACTGATGGAAGGCAAATACCAACGAG 1377656 33 100.0 35 ................................. TCAGGACAGAGGCAGTCCGGGTTGACTCGTTGACC 1377724 33 100.0 33 ................................. TATGCAAAGCTCCTTTATTGTTTGGTCCTCCCA 1377790 33 97.0 34 ................................C GCCAAAAAGAGCGAACACCCTGGATGCCGTATGG 1377857 33 100.0 33 ................................. GATCCGGTATCACCGGGAGCAAATGGCCTACTG 1377923 33 97.0 35 ................................T CACATTACTAATTTCATTATTTACCGGGAGAGTAA 1377991 33 97.0 34 ................................T TTTTGTCCTCCCCTAAATTAATGTTAATGGACTG 1378058 33 97.0 32 ................................G CCAAAAATACTGCGGCTCGTCAACAAGAGAAA 1378123 33 100.0 33 ................................. TATGGATATTTATTGTTTATTACTCATATCAGG 1378189 33 97.0 34 ................................G ATTTGTCTTCAAGGATGATTACTTCTGCCTTCCA 1378256 33 100.0 31 ................................. AAAAAGTCTTAAATATTGTCAAATAGATCAC 1378320 33 97.0 34 ................................C CGGTGTGGTTAACATAAATGGTGATCCGGTGCCC 1378387 33 100.0 33 ................................. GCGAATCGCTGAACCAGCTCCGGCCCAGCTTCC 1378453 33 93.9 34 C...............................T CCTATGACGGTAGCTCCTACTATGACAACAGCTC 1378520 33 87.9 34 .........TGT....................T AATGCCTGTTTCGCGGCTGCGCGTTCATCCTCTG 1378587 33 84.8 33 .........TGT.T..................C GCCTCGATGCCGGTCAACACCGCGACAACCTCT 1378653 33 93.9 36 .........T.................A..... ACGAATAGTGGAGCACGCGCAATTGGCCCTGCTGCG 1378722 33 75.8 0 A..........TTT........A......TT.T | ========== ====== ====== ====== ================================= ==================================== ================== 28 33 96.2 34 GTCGCACCCCACGCGGGTGCGTGGATTGAAATA # Left flank : AAAATTGCAGGACATACTGGAAATCAGCGACGCAGCCCGCAAAATTGCAGCAGACATTGATCATGAGGTCGTGCAAATCCCCGATATTGACAGACCGAAAGGCGCACCAGACGACTATGTGAAGACCAGCGATCTGATGAAGCAGGTTGACAGTAAGAGCTATGATCAAATGAATGATTATTTTAAACAAAATGATAAGTTATCCGGCTTAAGCCTCCTAATCAAATTTGCTCAACAAATCCGGAGTGGATTGAACAATACAAATCGGGCATAGTCTCTTCATCTGAAGAAGCCTAAACTGCCAACTGCGCAGGATAGATGGTTGGGTATTAGTGCGAACCCCAAGCTCCCATAAAAATCCCGGGAGATTCGCACCTCTTGCGGGACAAGGTTTTTTGCGATATTTTGAGTAAAAGGCAGCCTTGAAACTGGATCGTTCGGCGAGGTTCGCACTGGAGCGCTTCCAAATGCCCGCCGGGTAAGGTGGGAAGTTGGGCGCT # Right flank : TAATAACCCCTTAATAATCATTAGCCTAAAGGCGCAGAAGATCATTGAGAATCCCTCAATGGTCTTCTATTTTTCACGTCAATATATTGTTAGCGGCATGTTGGCAGTTGACCCAAGCCCCGGCGGCAACCAGCTCCTTCAAAGTTATGGAGAATCCTCGTAGTTCGTCAAGTTACCCTAAAGAATACCCTCAACAGTCACTCATCCTCATAGTAAGGAGCGTAAATTGTTACAATTATGTGTTTTTGGGCGAATTAAATAAATTTATGTAAATTTGATAAAGGAATGCAGGGGTATTTGGAGAATTTATACAAAATACTCATTACTTTATACCTATGAGGGAGGAGAAATGGACTATTCAGAGAGTGACGACTATACTGCGCATATTAGAGAAAGCGACAAGCAAGTACAGACCGTCAAAGATCATCTGCTGGAAGTGCGGGACCTGGCAAGAGCTTATGGAGATCCGTTAGGGATAGGTCATATTGCTGGGCTTGCAG # Questionable array : NO Score: 5.51 # Score Detail : 1:0, 2:3, 3:0, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.44, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCCACGCGGGTGCGTGGATTGAAATA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCCCTCGCGGGTGCGTGGATTGAAATA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-10.80,-10.90] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-17] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0.27 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 1387250-1389211 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP009286.1 Paenibacillus stellifer strain DSM 14472 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ====================================== ================== 1387250 31 100.0 38 ............................... AAATACTCGTCTCTTGTCAGTTGCATACCATACTATCG 1387319 31 100.0 35 ............................... AAGTACCATGAACAGACGTTTCCGACGCACCGGGG 1387385 31 100.0 36 ............................... AGGTAATGGTCGCTTGTATCTGCGAAGCAATAACGG 1387452 31 100.0 34 ............................... GTAGCTGCGTCAAGCGTGTCCTTTGCGCCCTTGG 1387517 31 100.0 35 ............................... TGTCATGGCTTGATTCAGACGGACGAGGAGCTGCG 1387583 31 100.0 36 ............................... ATGAATCCGACGTGCATAGTAGCACGGAGTGCGAAG 1387650 31 100.0 36 ............................... GACACCCACCATTTCACAGGTCATATCATCATTACG 1387717 31 100.0 35 ............................... ATCAGCGAACCGTTGCTGTTTCTCTCTGAGTGCCG 1387783 31 100.0 35 ............................... GTCTCCAGTCTCGGTAATCAGATCGACGATCATCG 1387849 31 100.0 35 ............................... ATCTGCTCCGAAGACGAATAGCCAACAGGGAAATG 1387915 31 100.0 36 ............................... ACCAAACTTGGTCCAGGTGAGTTCCGGGAGCAGCCG 1387982 31 100.0 36 ............................... TCCACGAAATCCACCTCACTTAAATAGGATGAGCAG 1388049 31 100.0 36 ............................... CAATGGTTTACTTGTACGCCGGGTCTGGTCTTGCAG 1388116 31 100.0 35 ............................... AATAACCTACCAACATGAATGTAGGCTTGATCTAG 1388182 31 100.0 36 ............................... CTACTGCCCTTGATTCCAGTGTAGCATTATGCAAGG 1388249 31 100.0 35 ............................... CAATAGCTAGGAGACTCATATGACTAAAGAGAAAG 1388315 31 100.0 34 ............................... TCGTCCTTAAGCGCGTCCTGCTGCGATTCAAGTG 1388380 31 100.0 36 ............................... GACCTTCGAACGCCAGCGAGCGAGCCGGATTTCCAG 1388447 31 100.0 34 ............................... TTTTACGAATACTGAATCGAAAAATCCATCATCG 1388512 31 100.0 37 ............................... CCCCATAGTTATAGTAATGTTCAAAAGGCAAAGCATG 1388580 31 100.0 36 ............................... TCCAGATGACGATGAATATTTAATTGTTGATGAAAG 1388647 31 100.0 37 ............................... CTGATTGGCCGAAGGCCCACGCTCGACAGCATAAGCG 1388715 31 100.0 33 ............................... TTCGACAAAGCTATCCAGGAGCTGCTGGCCGCG 1388779 31 100.0 36 ............................... CCATAGACAAACTTGAGCATGTCCACTCGCCGATCG 1388846 31 100.0 35 ............................... CCTTACCGAAATGACCAAGGCGAATCAGGATCAGG 1388912 31 100.0 36 ............................... TATGCGACTCCGGACATTATGTCAGTTGACTCCCGG 1388979 31 100.0 38 ............................... TTTAGATCGTTGTACCAGCTCACGATGCCCTCAGCTCG 1389048 31 100.0 35 ............................... ACGAGTTGGAAGCAAGGAAAATACACGCCTAAGCG 1389114 31 100.0 36 ............................... AAGTGGAACGAGGATCAAGTTAGGCTGCCGGAAGTG 1389181 31 96.8 0 ........T...................... | ========== ====== ====== ====== =============================== ====================================== ================== 30 31 99.9 36 TCGCACCCCGTGCGGGTGCGTGGATTGAAAT # Left flank : GGACGAGTATCCCCCGTTCTTATGGAAGTAGGTGAGATCAATGCTGGTCTTAATTACGTATGATGTAAGCACCACCAGTCCTACCGGCCAGAGCAGGTTAAGAAAAGTCTCGAAGATATGCCAAAACTACGGCCAACGTGTCCAGAATTCGGTGTTTGAATGTGTTGTTGATGCGGCTCAATTCGCAGCTCTTAAGATCGAATTGACCGAAGCCATCAATATGGCCGAAGACAGCCTGAGGTTCTATCAATTAGGTAATAATTACAAAAACAAAGTTGAGCATGTAGGCGTTAAAGAATCAATTGATCTTGAAGGTCCATTAATTCTTTAGTGCGAATGTATAGCTCACATAAAATCCCCGGGAGATTCGCACCTGATTTGTTACATTTATTGGTATTTAATTAGGTTGAGAGCGAAGATTATAAGGAATATGGAGAAAAATGTGAGTGCGTTATAGCCCATACCAAGGGATTAATACCTTATTATGGTTATAATTCGCT # Right flank : TCGCGATATTTCCAACAAACCCACCAGCTCATGTGGTCCTATCCCCACGCAAGCGTGTAACATCGGGTACAGGAATGCAAAAAACAGATACCTGGGAAATCCTTTGCTTTCAGTACTTTTCGGGTTTTCCGAAAGTCACAAAAAATGGCGCAGATTTCAAAAATGAGGGTTGGAATTGCTAAACCTTGGTTTTGAGAGTGTACAGACATATACAAGGGCAAGAGCGTCCTTAATCGGACGTTCTTTTCTATTGCTTTGATTTGAATTTGGTTGAAAAGAATCCATATCGACTGTTATGTTCAGAGCAAATTGGAGAAGAATTTTGTAGAGGAGCATGGTCAAGAATACACCCTCAATACATATCGACTGGACTAACATAGCTAGAAAATTCAAGGGTGGTATCCTAAGAAAATAAGTTTCCAGAGGTTTGAAGCGCAGAGAACTAGACAAAGTGGAAATGAAGTCGAGCCTCAAAAGTACGAACCCCAAGCTCACATGAA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCGCACCCCGTGCGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched TCGCACCCCATGCGGGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-5.60,-5.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: F [63.3-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.27,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 4 1389856-1390149 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP009286.1 Paenibacillus stellifer strain DSM 14472 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== =================================== ================== 1389856 31 100.0 35 ............................... CACAAAAATGGATTTATTTGTTAATTATTGGACGA 1389922 31 96.8 34 .........G..................... TAAGATGCGCGTCCAGGACTTCAAAATCTCGGAG 1389987 31 96.8 35 ............T.................. CTTTTCGATTCAACTCACGTCATGTATAGCACTTG 1390053 31 87.1 35 ......T......A...........C...C. GGGGTGTGCGGATCAGAGTCCTCGAAGAAATCAAG 1390119 31 93.5 0 ........T...T.................. | ========== ====== ====== ====== =============================== =================================== ================== 5 31 94.8 35 TCGCACCCCATGCGGGTGCGTGGATTGAAAT # Left flank : TGGCGCAGATTTCAAAAATGAGGGTTGGAATTGCTAAACCTTGGTTTTGAGAGTGTACAGACATATACAAGGGCAAGAGCGTCCTTAATCGGACGTTCTTTTCTATTGCTTTGATTTGAATTTGGTTGAAAAGAATCCATATCGACTGTTATGTTCAGAGCAAATTGGAGAAGAATTTTGTAGAGGAGCATGGTCAAGAATACACCCTCAATACATATCGACTGGACTAACATAGCTAGAAAATTCAAGGGTGGTATCCTAAGAAAATAAGTTTCCAGAGGTTTGAAGCGCAGAGAACTAGACAAAGTGGAAATGAAGTCGAGCCTCAAAAGTACGAACCCCAAGCTCACATGAAAATCCCGGGGGGATTCGCACTCCTTGCGAGACAAGAGTTTTTGGGTTATTTTGATTAAAAGAGTCCTTGGAACCAGACCGTTGAGAGACATTCGCACTAAAGCGTTTCCAATTGCTTGCCGGACAGGGAGAGAAATTAGACGCTG # Right flank : TTCCAGAAGCAATCTAAAGTCGTTCACCCAGCTCAGGGTCGCTCCCCACACAACTGCTGCATACAAAAAAGAACCGGCGACTTCGCCGGTTCTTCACTCATTATCCTATATGTATCGTCCATTGCACTCCGGAGGCCGGTGTGCTATCATTGTAAGGCTATGGGCATATTTTTCACATCAAAACATAACTCATCCATCTTATCTACACTATAATCATATCACAGGGTGGAGCTGGTTGTCAAATGTGCCTTCCGCATTCCTAACAAACTTGAAGGGGAGCGTGGTCGGGAAGATGATTGAGAAGCAGGATTGGGTTCAGGAACGGAAGCGGCTGGAACAGGTTACGGAACAGCTCGAGGCGAGAATCGGCGAACTGGAGCCGGAGGTAAGCGGACTACGCGATCAGGCGATGGACTTCCGCAAACGGTTCTGGGAGGAAGTCACCGTCAATGCGAGCACGAATGAGGATTTTGAGGAAACCTTCTACAGCATCAGGCAGC # Questionable array : NO Score: 6.81 # Score Detail : 1:0, 2:3, 3:3, 4:0.74, 5:-1.5, 6:0.25, 7:0.01, 8:0.8, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCGCACCCCATGCGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched TCGCACCCCATGCGGGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.00,-5.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //