Array 1 53634-54440 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHLTE010000029.1 Pseudomonas aeruginosa strain 2021EL-00151 NODE_29_length_63668_cov_42.042650, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 53634 28 100.0 32 ............................ TTTCGCTGTCGGGGGATATGCAAGCGTCTCGC 53694 28 100.0 32 ............................ GAGCTGGAGCGCCTGGCCGCCGAAGCCCTGGC 53754 28 100.0 32 ............................ ATCGTGCCGGATAGCAGCCGTTCGCCTAGGAC 53814 28 100.0 32 ............................ AAACGGGGCATGTGGTGGCAACGTACAGAAAG 53874 28 100.0 31 ............................ GATTCGCGTCGTAGACCTTGGTGGCCTCCGC 53933 28 100.0 32 ............................ ATCTCCACCACCGCTACCCGGATCAGTAGGGT 53993 28 100.0 32 ............................ ATCCTGATATCCGGCGCTGCTTTGCCGACTAT 54053 28 100.0 32 ............................ TCCCGAGGAAACGCCATGCACACCCTCAACCT 54113 28 100.0 32 ............................ TTGCCGGTGGCCGTTTCGACGATGTGGAAGAA 54173 28 100.0 32 ............................ ACCGGCGCCGACTGGCCTTCGATCCAGATAAC 54233 28 100.0 32 ............................ TGGTTCCGGCTCAAGCAGCGCAAGGAACTGAG 54293 28 100.0 32 ............................ TCGACATGGCGACGGCTCTTGAACGGTTCTAT 54353 28 96.4 32 ........................A... TGTCTCGAAGTTCATAAGCGGGCTTAGGGCGA 54413 28 75.0 0 T.........AC.....TC.TC...... | ========== ====== ====== ====== ============================ ================================ ================== 14 28 98.0 32 GTTCACTGCCGTATAGGCAGCTAAGAAA # Left flank : CGAAGTCGTCGAGGACGAACCAGGCCTGGTCGTCGATCAGCAGCGCGCGCAGCAATCGCTGCTGTCGGAAGAAGTAGTGCGGGGCAAGCTGGGTATGGCCGTGCATGGGAGAAATCCTTCTCTGAGCTGTCCGCTGCCTGGCTTCTGCCGGCGCGGCAGGGAGACAGGCCGCTCGTGGGTGTTGGGCCAGCAGGCTGTGGCCTGCCGGGAACCGAAGTCGCCGGCGAAAAAAGCCTACTGACAGCGCCTGTAGGACGGCAATGGCTAAGCCTTGTACGAAGTCTCCGATGGCACAAGCCCGCTGAACAGCTAGGCCGTTCTGAACATTACGCCGGCATGGAGAAAACAGGGGATGGACGCTATGCTTGGGAACCCTTTTTTTGGTGGTTTTTTAAAGCCCTTTTAGATCAAAGGGTTAGAGATCGTTGCAAAAAGAGGGTTTTTCCGGGCTTTGGCGCTGGAGCCCTTGGAGCTTGGAAGGTTGATGGTTTTTTGGTCTA # Right flank : ACGGCCAGCAGCCCTGAAGTATCGATTGATGCGGTTCGCTGTCGGCCGGGGTCACCAGTCGAAACGAAGTCCCTTTCCATGGGACTTCGTTGCGGACATGCCGATGAGGCGCTGACGGGGTTCTTCAGAACCAGGGAACGAAACCTCCTTTGCTCAACCCGTAACAGGTGAATCCTCCTTCCTCTGCCGTCGCCTGCAACGGCCCGTGGCGGATGAAGAGACGGAAGTGCTGTCCGGTGCTCTGGCTGCGTAGCGTGACGAAGGGCAGGTCCAAGGTTCTCGCGACCGTATCGGGAATGCGTTTCCGAGCCTCCTCCTCACTCAGATCGTGCCGGCGCATGAGCCGCCGCCGCAGACGTTCCGGATTGCTTTTCGCCTGAACCCGACTGACCTGACGGTACGGTGTGGGGTGAGGCACGACTGCCGCTTCTCCGAATTGCAGATGGTCCCGCAACCCTTCCAGCCAGGGCCGGGCGAGCAGGGCATGAAGGTCGTCCGCC # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 63537-62968 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHLTE010000029.1 Pseudomonas aeruginosa strain 2021EL-00151 NODE_29_length_63668_cov_42.042650, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 63536 28 100.0 32 ............................ CGTTGCGCTTCGTCGATCACGATCACCGAGCC 63476 28 100.0 32 ............................ TTGTCGGTCGCCTTGATGCCAACGATGGCCCA 63416 28 100.0 32 ............................ TCGCCGATGAGGCGCATGTTCACGGTCCCGCA 63356 28 100.0 32 ............................ CAGAAGCGCCGGCCGTTGGCGAAGAACCAGTA 63296 28 100.0 32 ............................ GCGATCCACGGCATCAGCCACGAACAGGCGAT 63236 28 100.0 32 ............................ AACAGCGCGGGAGTGGCGCGCTCGATCGGCAA 63176 28 100.0 33 ............................ AGGGACGTCGCGGGCCAGACCTACGAACTGTTT 63115 28 100.0 32 ............................ TGACTGCGGGGCTGCACGACATAGTCGTCGAC 63055 28 100.0 32 ............................ TCGTAGTGGCCCCACGTCGGCGGTAGCTCGCC 62995 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 10 28 100.0 32 GTTCACTGCCGTGTAGGCAGCTAAGAAA # Left flank : CGACCCTTTTTTCGGACGATTTCTTACGCCCTTATAAATCAGCAAGTTACGAGACCTCGAAAAAAGAGGGTTTCTGGCGGGAAAAACTCGGTATTTCTTTTTCCTTCAAATGGTTATAGGTTTTCGGAGCT # Right flank : CTCGAACCCACCTCGGCCACAACAGCCGCCGGGTTCGCTGCCGTCTAGGCAGAACCACCCTCCCCATCCCGCTACCAAACATCCGAATATAAAGTTTCTACCCCACCCGCCCGCCAGCCTCGCCCGTCCACGACAATGTGCCCCGCTTGGAAGCTCACGCTCCTCATACAGACGAAAACGGGGTAGCGGCAATCGGCCATATCCGCTAAACAGTTGCCTTGGCGCAGAATTCGATAGATCCGATAGGGGCAGGCCACGGTCAGCATGGACGACATTTCTCCCAGCGAACTGAAGTCGATCCTTCACTCCAAACGTGCCAACCTGTACTACCTGCAACACTGCCGGGTACTGGTCAACGGCGGGCGGGTCGAGTACGTCACCGACGAAGGCCGGCATTCGCACTACTGGAACATCCCCATCGCCAACACCACCAGCCTGTTGCTGGGCACCGGTACTTCCATTACCCAGGCAGCCATGCGCGAACTGGCCAGGGCCGGGGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGTAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTGTAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [31.7-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 380203-378706 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHLTE010000001.1 Pseudomonas aeruginosa strain 2021EL-00151 NODE_1_length_570075_cov_48.810581, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 380202 30 100.0 36 .............................. TGCAACTCAGGTAAGAAATGTTGCAAGAGCATTGGT 380136 30 100.0 36 .............................. GGTTGATGGCGATATGGCTAAGGTACGCGCTCTTGT 380070 30 100.0 36 .............................. AGCGCTATGCAGTAGGAGCCCAGACAGTCGGGATGT 380004 30 100.0 36 .............................. CTGATCAATGACCTCCTCGGTGGCCGCACACTCCGT 379938 30 100.0 37 .............................. AACGCCTTTATCGCCGCGAACAACGCTCCGACCTCGT 379871 30 100.0 38 .............................. ACTGCGACTCTAGAGTTGCGTGAACGACCTATTCTTGT 379803 30 100.0 37 .............................. ACCTTTTACTTGGAGAACGATATGAGCAAGCACACGT 379736 30 100.0 36 .............................. CTTCGGGAGAAGGCGCGCGAGGAAGGTAGCGGCAGT 379670 30 100.0 40 .............................. ATGAACGGGAAAGCTTTCGCGTCATCGCCGGTAACGAGGT 379600 30 100.0 36 .............................. CTGGGGCTCAAGGCGAAGAAGGTGGCCTGATGGCGT 379534 30 100.0 36 .............................. GCGCCAGAAGCCTCGCAACCACTGCGAACATTAGGT 379468 30 100.0 36 .............................. TCGACCGGCGAGATGTCGCGCGACACCCTCGGCTGT 379402 30 100.0 38 .............................. TCTTTGCGGACATAGTTGTAGGCGCCGGCGAGTGCGGT 379334 30 100.0 36 .............................. GCCGAGATCGAACCCTTCCCGTCCGCCGTACTGGGT 379268 30 100.0 39 .............................. ATCGTGAGCCGAAGCATGGAGCCATCGGCGAGATACCGT 379199 30 100.0 35 .............................. AGCAACTATCGCAAGGCCCTGCCGCTGCAAGACGT 379134 30 100.0 36 .............................. CGCTAATCCCGCGTCGCACTCGCCGCCACGATGGGT 379068 30 100.0 36 .............................. GGGGCAGCCCCCACCACCTGGCAGAAGATCGCCAGT 379002 30 96.7 37 .................T............ TCGCGCAGGGAGCGCTCGATGAACGAACGCACATCGT 378935 30 100.0 37 .............................. ACGAACACGGTTATCACCGGCGACGGTAACAGCGTGT 378868 30 96.7 38 ...............T.............. AGCCCCGGCCAGGTCGTAATGACCGCAGCCGGTGAGGT 378800 30 90.0 35 ...........T................CA ACTGCCGTTGTCGCGTGACGGCTATCAGGGAATGT 378735 30 83.3 0 .......TA.G............G.....G | ========== ====== ====== ====== ============================== ======================================== ================== 23 30 98.6 37 CGCGCCCCGCACGGGCGCGTGGATTGAAAC # Left flank : CATTTCTGTGGAAGTGAGGTGGCGACATGATGGTTCTGGTCAGCTATGACGTGAGCACTCAAGATGCTGCAGGTGGCAAGCGCTTGCGCCGCCTGGCCAAGGCCTGCCGCGATTATGGTCAGCGAGTGCAATACTCGGTGTTCGAGATCGAGGTAGATAGCGCGCAGTGGACACTCCTTAAGCATCGTCTGTGCGACCTAATCAATCCGGAACAAGACAGCCTACGTTTCTACTACTTGGGCACGAACTGGCAACATCGTGTGGAGCATGTTGGGGCCAAGGTTGTACTCGACCTAAATGGCCCGCTGATTCTTTAGCGTCGGCGCGAACCTAAAGCGACCGACCCAACCCTGAGGGGTTCGCAGCTCTCTAGCTGATTGATTTATCTACTCTTTTTTTGACGTTAGCAGTTTGATGGCGCGCGCCTTGCCTAAATAAGGCATGTTTCGCTGAAGTAAAAGGTTTTTTTCATGCTGATCAGTAAGTTATAAGTGGGCGGT # Right flank : ATGGATTTTTGGGAGTTTGTCCTGAAAAATTTTGTCTCGCCACTCTTCTTCCCGGCTCAGAGCCTGGCCAGGAACTCTTGTGTCACAGTGTCGCGGCCCCAAGCCGAAAGAAAGACCAGGTTGCGCTGCTCGTCGCACACGCAGGCGTCGACGTACAGGTCTGGGCACTCTTCGATCTGGTAGAGCGGGGTGGGACTGGGCATAGGAACCTCCTGGAAGGAGGAGCCACGCCGCCCTCGAGGAGCGGTGAAGCCCCTCGGGGTGTGGTCCAACTGGTGCAGGGGAGCGTGGTGGTTACCGAACGCTCTTGGTGTGAGGGTCGAAGCTGAGCCCATCGGCTTGGTGCAGCGGCTCTTGGCCGATCAGGAAGACCTGGCAGAGGTACTGATTGCGTAGCGCGACAGCCGCTTCCGCCTGCTCCAAGGTCAGCGACAGCTCCTCGATGAACAGGTCGATGAGCTCGTCGTCGCCGGCGACGTCGTTGTTGGACAGTTGGTCCT # Questionable array : NO Score: 9.19 # Score Detail : 1:0, 2:3, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CGCGCCCCGCACGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CGCGCCCCGCACGGGGCGCGTGGATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.80,-6.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 255507-256554 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHLTE010000004.1 Pseudomonas aeruginosa strain 2021EL-00151 NODE_4_length_496243_cov_46.903748, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 255507 28 100.0 32 ............................ CCCCTGGCCTCAAGGTCACCATGCCGGACATT 255567 28 100.0 32 ............................ TTGTCGGACGGCACTTCGGCGAGTTCGGCATA 255627 28 100.0 32 ............................ ACCCTGGAAGCAGGGCCAGGATGTCGCAGTCC 255687 28 100.0 32 ............................ ATCACAACCCGCATCGACCGGTTTTTCTTGTC 255747 28 100.0 32 ............................ GATGGCCGGAAGCAACGGCAAGGGCTGCAACT 255807 28 100.0 32 ............................ CAAAGCGTGGCGAATATCTACACCCGCTCGCA 255867 28 100.0 32 ............................ CGGTAGAGACGTCGGTGAGCGCTGCGATCTGC 255927 28 100.0 32 ............................ GCAATCGATCAGGCTATGACCGCCGAAGCCTA 255987 28 100.0 32 ............................ TGTACCAACTGAGGTGCTACCTCAACCATGGC 256047 28 100.0 32 ............................ AGGCCGATGGAGTAGCCGGACAGCACTGAGCC 256107 28 100.0 32 ............................ TAGTGTGGAATTGATGTGCGCATCTTCTTAAA 256167 28 100.0 32 ............................ TGTGCCGGGCAGGCTGGCCAGCGCCTCATTGA 256227 28 100.0 32 ............................ GTCGGCCTGGAGTTTCGTCGGGCGTACATCAG 256287 28 96.4 32 .................T.......... CAAGCGGACGGTGACACGGACTATCAGACCGG 256347 28 100.0 32 ............................ TCCGGCACGCTGTGCTGAGCCTGAGCTACAGG 256407 28 100.0 32 ............................ ATCTCAGCGCCGCCTGTTCTGCCGGCCGCATC 256467 28 100.0 32 ............................ TACGGGCAGTCACGGCGAAAGGCACTCAGCGA 256527 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 18 28 99.8 32 GTTCACTGCCGTATAGGCAGCTAAGAAA # Left flank : GACATGTGTCCGCGTAGCGCCACCCTGTACGTGGACACCCATGCACTCCCCACGCACTTGTTCGACAACGCGAAAGTGCGCTTGAGGTCGGCGATCAACATCCTGGCCATGACCCGTTTGCTCGATGAGAAAGAAGAGCCCGGCGGCACCCTGGCCTACATCAACGGTGCGTTGCTGTCGCTGCTCAGCGATGCCTTGTCCGAAATCGAGGCGGGCCACCCGAGCCTGTAGCGCCGCTCCCTGGCGCGACGCCCCCGGCCTGGCCGGGGGCTTTGCGGCATCGCCATCACAAGACCTTTCGCGCCCGAACGGCACGCTTGATCGCCGTCCCGGTCCTCGCGAAACGGCCGCCAATTGCCCGAAGCTTCCGACCCTTTTTTCGGACGATTTCTTACGCCCTTATAAATCAGCAAGTTACGAGACCTCGAAAAAAGAGGGTTTCTGGCGGGAAAAACTCGGTATTTCTTTTTCCTTCAAATGGTTATAGGTTTTCGGGGCTA # Right flank : ACTCAAGAAAGAGCAGAACGGCCAGCTTGCGCCGTTCATTGCCGTGTAGTCCCGTAGGGCGAATGCCGCCATAGGCGGTATCCGCCCTACGGATCGGGTTCCTGGCATCCACGAAGTGAGGCTTGCCCTCCAAGTGGTGGGGCGGCAAACCCGCCCCGTCAGGAGGCCGAGCGGAATCGTTGCGGAGGGGGACGAGTGGCAGGATGCCGCGAGAGCCGCCTCGGTCCACGAAGGACCGTGGCGGCGTGCCGCCGGGAGCAACGATGCAGCGAGGGCACCCCAGCCGAGAAGCGGCTGGGGCCGGATGCCGGGGCGAGTCTTTTGGTTCCTTTTGGACGCTTGCAAAAGGAACTCGCCTGGGAAGGCGAAACAAGAGGCCAAGGCAGGCACAGAAAATAGCTTGACCACCAAACATGACGCCCGCTCAAGCGCTAAGCAACAGCGCCCCCCTCACTGCCGTGTAGCTAAGAAATCGCGAGCGATATAGTCCCGTAGGGCGA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //