Array 1 251862-250814 **** Predicted by CRISPRDetect 2.4 *** >NZ_RDOW01000003.1 Vibrio anguillarum strain 100819-1/4A contig_3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 251861 28 100.0 32 ............................ CGTGAGCGCAAATTGCAAGATGGCATCTTCCA 251801 28 100.0 32 ............................ AAACTTAGATTGGCCATTTCGGTAATCGGCTA 251741 28 100.0 32 ............................ ACCATTGGAGTAAATGATGGAATTACATCAAG 251681 28 100.0 32 ............................ AACTGATTCAAAGCGCTGCGCGTAGCGGTTAA 251621 28 100.0 32 ............................ ATAATGTTTCCAGCGTCAGAAGCAAACATATA 251561 28 100.0 32 ............................ GAGCTCATTTGGAATTTGTTGTTGAGCAGCTA 251501 28 100.0 32 ............................ GTCGGGTAAAATTATCGTCGTGCCAAGCACTT 251441 28 100.0 32 ............................ TCTCCGATAAAGCGCGTCAATATGGCGCGCAA 251381 28 100.0 32 ............................ ACTTGGCATATAGCGAATTTCTGGGTCGTTAC 251321 28 100.0 32 ............................ TTCAACACTGGCCGCTGGCTGAGTTTCTGCAA 251261 28 100.0 32 ............................ AAAATGATGCGGTATCTATCGCACTGTTTGAA 251201 28 100.0 32 ............................ TTTAAACTCTTGGATGAGTGAAGAGAAAGCGA 251141 28 100.0 32 ............................ CAACCCAAAAAGCGGTGGCAGTAAAATAAATA 251081 28 96.4 32 C........................... GTGTGGCCATTTACGGTAAGTTAGCCGAGGTC 251021 28 100.0 32 ............................ TCTAGTGCTCCGTTTAACATACCCATGTGATT 250961 28 100.0 32 ............................ AGAAATACTAATTTTGCCGTCTTCGTTATCCT 250901 28 100.0 32 ............................ CACAAGGCCGTTTCGCCCCACTTAAGCCAGTT 250841 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 18 28 99.8 32 GTTCACTGCCGTATAGGCAGCTTAGAAA # Left flank : CGATGTAACTTACGTAAGTTTTGTACGCAAGCAGGTGAAATCGCCCGAACGAATAGAGCGGGATATGCAGCAAAAAGCCGTCCTATGGGCAGCAAAATCCGGCAAACCGCTGGAGGAATGCTTGGCGGCTTTGCAACAAAGCAAGCCGACAGCATTGTGCTCTTTGCCGTTTATTTACTTGCATAGCCAGCAAACCAAGCAACGCTCACCAGAAAAAAACAGCAAGTTCCCGCTGTTTATTCAGATGGAGCAGCAAAGTATATCGCAAGATGGGAGCTTCGATTGCTATGGTTTGAGCAGCAAAACGCATGGGCAGTCAGTATTGGCTACCGTACCGCACTTTTAAATTGAACGAAAAGGGTAGTTTTTACCCTTTATTTTTGCTCTTTAAAAATGTGCTTTAAATACAAATAGTTGCAATAGGTGGGTTTTAACAAGGTAAAAAGATGATTTTTACCCTAACAGCCTGTTGCAGCTTATTTTTATTGGTTTATTCTATT # Right flank : GCTAGTGATCAAATATGAGACTGATGGAGCTAGCGAAACACGCCAATCTGACCTAAGAAATAGGTATCTCTGCCTACTTTTTTGAGTTTGGAGTATGACAGAGAAAGAGAAGTACATTCACAAATAGTTAATTCATAAATAGTTAATATTTTTATAATTCTGATACCTATACAAATTAGGCTGTCAGCGATGTTGGCAGCCTAATTCACGATGAATGTTATTGACTAGCTAGTTGCACAAATGGAAAAGTTTCCTTTCGATGCCTCCTCGATATAGTTACTCCACCAGCGCATCATTTCTCGACGCTGGTTAAGATACAACGCCCGATTGTAAATACCTCGAACTTGATTTCTATCTACGTGAGCGAGAGCAAGCTCAATAACGTCATTATGGAAGAGTTTGGTTTCATTTAGCGTTGTACTAGCTAGAGCACGTAAACCATGAGACACCAAACGATCTTTAAAGCCCATACGTTTAAGGGCAATGTTAGCCGTTTGGCT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGTATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //