Array 1 13513-14274 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_FJAV01000006.1 Legionella pneumophila strain 2531STDY5467321, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                      	Spacer_Sequence                      	Insertion/Deletion
==========	======	======	======	=====================================	=====================================	==================
     13513	    37	 100.0	    36	.....................................	TCTTGAACAATTGCCACTTGAAAACCATCATCTACA 	
     13586	    37	 100.0	    34	.....................................	ATCCATGTGTCTTGCATCCTTGTAATACCAGCCG   	
     13657	    37	 100.0	    34	.....................................	GTAATGCAATTGACACATTGCCCGCATTCTTGAA   	
     13728	    37	 100.0	    36	.....................................	TTTCTCAGCAAAAAAGGCTTGTCTGTTTATCCTTAA 	
     13801	    37	 100.0	    36	.....................................	ACATCCCCCTTTTCCACTACTTCAAAAGATCTCAAC 	
     13874	    37	 100.0	    37	.....................................	GACAAGAAAGGCTCCTCTACTAAAACCCACAAAGTAT	
     13948	    37	 100.0	    36	.....................................	ATCCTAACCCACTCAACGGGATTAACTTTCTTTGAA 	
     14021	    37	 100.0	    37	.....................................	ACTTCCATTTCATCATCAAAATCTCGAATGCTAAAAG	
     14095	    37	 100.0	    34	.....................................	TGTATGTGAAAAGCGTTTTAAAAGCTTAAAGAAA   	
     14166	    37	 100.0	    35	.....................................	GTCGCATCGTTTTCATGGTCGTAGCCTGACTTCTT  	
     14238	    37	  81.1	     0	....A......C...........TT...T.A.....T	|                                    	
==========	======	======	======	=====================================	=====================================	==================
        11	    37	  98.3	    36	CCAATAATCCCTCATCTAAAAATCCAACCACTGAAAC	                                     	       

# Left flank :   TCTTTTGCATCAAAAATTAGTTTAGGTCAAAAGATGCAACTGACCGCATATGGAATGCTTTCTGAATTGATTTTTGAAAAATCATGTACCCGAGGCTATATTATTACTGGTGAAAAAGCCAAAGCCAAATTAATAAAAATTGACGAAAAATCAAAGTTCAAAGTGCTTGAAATTTATGCTAAAATAAAGAAGATTTTTGACACAGAAACATTACCATACAGCACTGCTAATGGACTTCAATGCATTCAGTGTGAGTTTCTAAATCACTGTAACGATAGATTTTAAAATCGTTATATGCTCGCTATTAATACGAGCATAGAAAAACGATTCAATCTTTAATTTTGTTGATTTCAGGGTATCGAAATTTAGATGATTTCTAATTCAAGTATTGCCTTTTTTTTCGAAAAATCAAGTCTAAATAATGCAATTTGCTATTTTTCGAAGAAAACCACTTTTAATTCCTCGTGTTTCTTTAAAATAAACAAAGAGTTAAAATTGCT
# Right flank :  TACTCCATACTTTATTCTCTGTATACTATTATAGTAAAACTCCATGGAGTTATTATTTTATATAATTAAACATGTCGTAACTCCATGAATGTGACACTTTCATGGAGTTACGACAGCCGTTATGTTTGCTTGTTTTTCATCTTATTTGCTTAATAATTAACTTGATAATTATTAAGTGCTTTTATTTTACTCTGTTGCTTTTTCTGACAATACCTGTCTTTACAGATTATCTTTGTAACAAATTTTCTTAATTTAATTTTCAAAACCATGCCCAACACTGGATTGTCTTTTGTTTTGTACATCTCAACTGAATATAATACTAGTGAATTTATTTTATTAGATAATTATTTCAGTAAGTTCTAATATTCAGGACTAATTTCCCAAGAATATTAACCTCAGCAATATCACTCACTTTAATATCTGGCCAATTATCATTAAGCGTTAAAAGCTCGAATTGTGAGGATGTATAGGACAATTTTTTATATACACAGATAATTGCC

# Questionable array : NO	 Score: 6.17
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CCAATAATCCCTCATCTAAAAATCCAACCACTGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:62.16%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [0.00,-0.30] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [0-7] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [73.3-75.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.41,0   Confidence: MEDIUM] 

# Array family : NA
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