Array 1 63991-65912 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAMYK010000006.1 Clostridium botulinum C strain IZSVe-TV_7573_3_12 NODE_6_length_168375_cov_117.991_ID_4229, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 63991 37 100.0 36 ..................................... TCAGGCGGCTTCCAGCTAAATTACAAAATCAAATAC 64064 37 100.0 36 ..................................... GTAAGGTTTCTGCTCCTTTAATTTTAGCTGAAAAAG 64137 37 100.0 34 ..................................... ACTCTTCCTTCATGCCCACAACTAAAAGCACCAT 64208 37 100.0 36 ..................................... TTTAGGAGGTAATATGTACAAAATTAAGCTGCGATT 64281 37 100.0 36 ..................................... ATCAATATATTCAATACCATTTGTTATCGCCTCGTT 64354 37 100.0 37 ..................................... ATTTATTTATTCGCAAAGAGGTGTAGAACAGTTAAAA 64428 37 100.0 35 ..................................... GGGAGTTAGTGCATTTGATTCACATGGTAAATTCA 64500 37 100.0 36 ..................................... ATATAGATCAATTAGATAATAACAACTTGGTTTTAT 64573 37 100.0 34 ..................................... TTGGCAATGGTGGATTTAAAGTTTCTATATCCCC 64644 37 100.0 35 ..................................... CTTTATGTGCTGCTAGAGATAAAAAGATTTATAAA 64716 37 100.0 37 ..................................... TAGGACATGGTATGAGTATGCTGGAGCCAGTGCTAAA 64790 37 100.0 35 ..................................... AGGACCTCTTGTGTAAGTCCAGCCAAAAACTGTCC 64862 37 100.0 38 ..................................... AAAAGTATCAATTGAAGGTTTAAAAATGGCTTTCTTGG 64937 37 100.0 37 ..................................... CAAAATATCTTTAATTCTCTACCCCAAGGATGATTTA 65011 37 100.0 34 ..................................... CTTCCATAACTCGTGAAGGAGAATGTATGTCTAA 65082 37 100.0 34 ..................................... AATTTACTGTTAAATGCATAGAAATTTATTTTAT 65153 37 100.0 35 ..................................... ATACAGTTTACTTTTCTTTCTTTTTCTATATCGTC 65225 37 100.0 34 ..................................... AATTTACTGTTAAATGCATAGAAATTTATTTTAT 65296 37 100.0 36 ..................................... ATAAGTTTGGTTTGGAGATACAATACTTTGTATGTC 65369 37 97.3 36 ..................A.................. AATTCTTCATTTTCGTACTTCCATGTCTTTGATTTC 65442 37 100.0 36 ..................................... TAAATATAGAAATAGAAAATCACACGAAAGCTATAG 65515 37 100.0 36 ..................................... TCATATATTTTTCCTCCTATACTGTTACTGTGGAGG 65588 37 100.0 35 ..................................... ATGGGTAATGCTGCTGCTACAAAACTTCAGGAGAG 65660 37 100.0 35 ..................................... TTTACTGGAAATTGGTCAAGGGCTTGGGATGGAAT 65732 37 100.0 35 ..................................... CCGAATATATTTTCAATTTCTTTTCTTACCGTCTT 65804 37 97.3 35 T.................................... ACAGTTGAAACTAAAGTATCTCAACTTGTAATGCC 65876 37 94.6 0 T...................................T | ========== ====== ====== ====== ===================================== ====================================== ================== 27 37 99.6 36 GGAATAAAAACATCTAAGCTCCATAGGAGATTGAAAC # Left flank : CTTTAATGAAAGAAATTGAATATATACCGTTTTTAATTAGGTAAAATAGGAGAATTTATGGTATGATGTATTTAGTTAGTTATGATATTGTCAATGATAAAAAAAGAACTAAACTTCACAAGTTGTTGAAAAACTACGGTGTTAGAAATCAATTTAGTGTTTTTGAATGTGATTTGGATGATAAGAAGTATGTTGAACTTGTATATAAAATTAATAATATTAAAGTTGAGTCAGGAGATAGTATAATGATTTATCCATTATGTTATTCTTGTAAATCAAAAATAGTAAGAAAAGGTTCGTTTATTGAAATTGATGTAAGAAATATGATTTTTTAATGCGCCAAGTTTAGTGTTTAAAAAAATATGCTACCATGGCGATGGCTATAAATAGCCATTTTTATAGAATTTTTAATAACACTGATATGAAAATAAAACTAATAATAACCACTGTGCGAAAAATACTAGTCTATGGTAGCCTTTATAAGGCATAAAACGCCGGCA # Right flank : TAGAAATATATTAGCAGAAAAAGGTAAGGTTAATAGGAATTATGAAATTTAATAGGAATCTGTATTAAAATTATTTATATAAATAGGATATAATAATTATATAAATAATTTTAATCTAGCTAAGATTGTAAGTAACAACTAAAAAATAATTATTATTTTAGTAAGTAAAAAAAAGAGTAACTCTTCTGTTATGATTATTTTAAATTAAAATAGATGATTTATTGAAAAAAGATATTAAATAAAATTTTATTTATAACTTCAGTTTGATAATTCTAAAAGTTGATTTTATTGAATTATATATGTTATTAAATTAAGTAATTTATTTAAAAATCATAGATATAGTTACTATATATATTTTTCAAAGATTTTTTAACTTTGAAATTTATATTCATGAAATTGTAAATGCGTTTTAAGATATTTTATAGCTAGTTTTAATATTTCACCCATTAAGATAATATCTAATTAAATTCTTATATAGTAAGATAAATTATAGTGTTGAA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:0, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGAATAAAAACATCTAAGCTCCATAGGAGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.70,-2.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : NA // Array 1 43236-42350 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAMYK010000008.1 Clostridium botulinum C strain IZSVe-TV_7573_3_12 NODE_8_length_108305_cov_128.529_ID_4233, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 43235 30 100.0 36 .............................. ATATCTTTATATGTTCGATGGACAAATACGTAAATA 43169 30 100.0 37 .............................. ATCTATAGTTAATGCTTTGGAATTAGATACTCTTAAA 43102 30 100.0 34 .............................. GGTATGCATAGCGAAATAGACGACGAAGATTTCG 43038 30 100.0 35 .............................. CTGAGGAATAAGTAGAAATAATATAACACGTTTAC 42973 30 100.0 35 .............................. TAAGAAAAGGAATGATATAAATGAAAACAAAAAAT 42908 30 100.0 36 .............................. TTAATTTTTCGTATATTCCCATTTAAATCCCCCCTA 42842 30 100.0 38 .............................. GTTAAGACCTAAAAATTATGAAGCTCCAGTTAAAATTA 42774 30 100.0 36 .............................. TGACCACATGAAAACGTACCACTATAACCTGCCATT 42708 30 100.0 36 .............................. AAAATAGAAGATAAAAAGAAAGAAATAGAAGCATTA 42642 30 100.0 36 .............................. TCGATTGTTAGATCACCTTCAACTAATTCTCCACCA 42576 30 100.0 36 .............................. TTGTTACATATTACTTTAAATTCATGTTTATCAAGC 42510 30 100.0 35 .............................. TAAAAATGATTAATTATTAAACCACCTCCAAGCGT 42445 30 100.0 36 .............................. TCGACTGTTTTAATTCTTTGAGTTTCTGCGTTCTTG 42379 30 90.0 0 ....................C...C.T... | ========== ====== ====== ====== ============================== ====================================== ================== 14 30 99.3 36 GTTGAACATTAACATAAGATGTATTTAAAT # Left flank : ATAAATAATGAGCCTTGGACTGATAAAATGAATATAGATTTATTAAAAAAGAGTATCAATGAGAATTTAATAAAGAAGATAAAAGTTATTCAGGATATAGACGAAACTTTAGAGCTTGATATGATAAAATGTATAAAATTAAAAAATAGAATGCCTATAGGGTGTAAATATAAACATATTAAATTATTAGGAAATAAATTTGAAATAGAAATTAAAGATGATGATATATCGCAATTTATGGCAAATATAGCTTTAGCAGTAGGGATTTTAGAAAAAAATTCTCTTGGTTATGGTTATTGTTTATATAAAAGTAAGTAAATTATTTTCCCAACCGATTAAAAAATTTAAACTAGTCATAATCCTTGATTTTACTGTTTTTGAGTGGAATTTAAGTTTAGAGAATTAAATTATTAAGAACGGTTGGGAAAAAAATAACGAAAGTATTTATTTTTAATAATTTTAGGGGTATAATAAAAATAAGAAATGGTTATTTTCCTATG # Right flank : AAAAATTAGTTAAATACTAATACAACAGTTTAAAATACCCCTATAAGTAAAAACTTATAGGGGTATTTTAGTTATCTGAAGTAATTAAATTTATATCGTGTTCTTCAAAAAACTTAACATACTCTTTAGGTGGAATCCTATCTGTAATAAAACAAGTAATATCTTCTAATTTACAATAAGTTTTAAGAGAAGCTGTATCTAACTTTGAGTGATCTGCTAAAAGTATTACATTGGAACTATTTTCAACTACTGTTTTTTTTACTTCATATTCAAAATTAGATGAATTTGTAACTCCTTTATCAATAGAAAAACCTGTAGTGGCCATAAATGCTTTGGATATATTATAATTCTTTAAAAAATTCGAAGCTTCTACACCAATTAAAGAATTAGTTTCTCTAAAAAGAGTTCCTCCTGTGGATAATATATCTACATTTGAATAAGGCAAAGCCTTTAGTAATATATTAAGATTGTTAGTTATTATAGTTAAATTTTTTCTATCA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACATTAACATAAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 1 5447-4899 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAMYK010000005.1 Clostridium botulinum C strain IZSVe-TV_7573_3_12 NODE_5_length_183088_cov_99.0826_ID_4227, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 5446 29 100.0 35 ............................. GAAACTAGCTTTAATTTATGAAGAACTGTTTTAAC 5382 29 100.0 35 ............................. AGTTTAACTATCTTATAGTTTCTACAGGCTTGGAA 5318 29 93.1 35 ..........A.....G............ TAGAAAATAAGTAATTTATTAAGTAATTTATATAG 5254 29 93.1 36 ..........A.....G............ GTATGTCCTTTGTATTTATCGCTGTTTTTACTACAT 5189 29 100.0 38 ............................. TGATAGCCAAATAGATTACTTGCTTTTTCCAACATAAG 5122 29 96.6 35 A............................ TAATAAGCAAATTCGGTTAGATGTAATATTCCTGT 5058 29 100.0 38 ............................. ACACTAATATGTATTTATGGAGTAATTACACCAAGTGA 4991 29 93.1 35 .........GA.................. AAAGCAACTTTCTTATTTCTAAATTCTTTTAAGAA 4927 29 86.2 0 .........GA.....G...........T | ========== ====== ====== ====== ============================= ====================================== ================== 9 29 95.8 36 GTATTAATTAGACTATATTAGTTATAAAG # Left flank : ATAAGTATAAATCACAAATACAATTTATAATTAATAGTATTAGAGTGGGATATTATAATAAAAATGCTTCTGAAGAAATGCTAAGCAATGATGATACAGTATCAGTATTGCCTACTAATTTATTAAGCGAATATGCTAAATTAAGAGAAGAAAAAAGATATATAGAAGCCAACGAATTATTTGTAAATGCTACAAAATATATATCAAAATATAATAAAGAGTTTAAAATTTATATAACAGATAGTGTATACGATTGTAGAGGGTTGGTTTATGAAAGAAATTGATATAAATAACCAAATAATTTAATAACTTATTTGCAGTGAACCTATAGTAATGTTTTGGGTTAATTTTACAAAAGTGATTGTAAGGTAGTTATATCAATGGCTGTAGAAATTTATTACAAAAAATGGTTCACTGCAAAATCATACTATTTGTTTGAATTTTTAATGGTCAAAGTATGGTTCGATATAGTATAATAGAGACATGGAAAGAACATTAGC # Right flank : GAGTCATTAAAATCTATTTTTTGTGATAATGGAAATTAAATTAAAGAATTTCAAAAATAACCGTTGACATAAATGGAAAACGGTAGTAGAATAATAAATGTGGAAAGAAAATATAAAGTTAGTATGGGTTGGAACATTTTGTTCAAGCCCTTTACATAAAAATATTAACAAAATTAAATTAAGTAAGAGGAGGAATTATATGAGAAATAATAAATTAGCAACACAAGGTCAATTGTTTAATTTTCAGGGAAAGGAATTTGCGGTAATTTTGATAAATGACGAACCACATTGGATAGCTAAAGAAATATGTGATTATTTAGAACTTAGTAATCCAAGTGTTTCATTGAGAAGTTTAAAAGAAGGAACTCAAAAGAAACATGTCGTAGGAGATATACTTAGTCAGTTAAAAAAACTGCCTAATTTAACCTTAGGTAGTCGAACTTCAGAGTTAAATTTGCTTACAGAAGCAGGAGTTTATAAGTTAATATTTAAATCAAGAA # Questionable array : NO Score: 2.86 # Score Detail : 1:0, 2:0, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.81, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTAATTAGACTATATTAGTTATAAAG # Alternate repeat : GTATTAATTAAACTATGTTAGTTATAAAG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:82.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [83.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA // Array 2 8318-7705 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAMYK010000005.1 Clostridium botulinum C strain IZSVe-TV_7573_3_12 NODE_5_length_183088_cov_99.0826_ID_4227, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 8317 29 100.0 35 ............................. AAGCAATATTCAATCGATAATGGATGGTTTAAAGT 8253 29 100.0 36 ............................. TGTTCCTCAGCCCTCATTTCTAGTTCTTTAGAATAT 8188 29 96.6 35 ............................C TTTCTTGGATTAGTAGTCTTTTCAAAACATATTTT 8124 29 96.6 35 .........G................... TCAGCTTTTAAAGTTATATCATCAATTATAAAAGA 8060 29 96.6 37 .........G................... GAAAGATAATTTTTATTTTCAAATACCTTTGATATTC 7994 29 96.6 36 .........G................... AAATCATCGAAAATATATGGTGCTTTATAATTGTCA 7929 29 100.0 36 ............................. CCTCCTTACAGTAAATTGTTTTTACTTGTACTTTTA 7864 29 96.6 36 .........G................... TCTTAATACTGTTGTACTACTTACTTTTTTATATGT 7799 29 100.0 37 ............................. GTTTTGTGTTTATAGAAGATTTTGATATACAAGACAT 7733 29 93.1 0 ................G...........T | ========== ====== ====== ====== ============================= ===================================== ================== 10 29 97.6 36 GTATTAATTAAACTATATTAGTTATAAAG # Left flank : GATACTATGCCTAAGGTTGTTATATTAGGTGAATATAAGTGGGGAAATAATGTGTTCCAAGGATTAATAAATAAAGATGGAATAAATATAGATGGACTTAAAGAAGTAATAGAGGAATACGAAGATTTTAGAAATAGTAAGATTTGGATAGGGGTTAGTAGTAGAATATTAAATGAAAATTTTCAAGGATTAAAGGAAAAGCTTGAAGAACAATTATCAGATTATGATGATATTGAAATAGGAAGTGTGAAGAGTGCTTTTGATGGATATTTAGAATATTTAGAAAAAACGATGTAATATTATATTATAAATTTTGCAGTGAACCTCCAGTAGTGTTTTTGGGTTAATTTTACAAATAGTGTTATAACATAGATATATCAATACGTCTAGCTATTTACTATAAAAAATGGTTCACTGCAAAAACACACTATTTATTTGAATTTTTAATGGTCAAAATATGGGATGATATAGTATAATAGAGACATGAAAAGAAAAATAGG # Right flank : AGATAATAAAATAAATAATCGTATAAAAAGAAAGGAAATAAAATATGAGCGACTTAAGTGATAAATTAAAGAAATATAAAGCAAAATCAGATGGTACTACTATATGTAAACATAATAATGATTTGTTTGTAGCTTTAGAACAATTATTAAATATACATGATATATCTGACGAATTAAAATCTTCGCTAAGAAAATGTATAAGTTATCATGATGTTGGAAAAGTTGTTGATGATTTTCAAAATAACATAGAATGTAAGCACAGAAAAATTAGGCATGAGGTACTATCAGCATCGGTAAAAAATTTAAATGAAAGTGAGAAATTAAGTATATTATTACATCATAAAGTTTTAGATAAATTAGCTCAATTTATTAATAATATATATTATCAAGATAGTTTAAATGAAGTAAAAAATAAATTAAATATAGAGACAGAAGATATAACAGAATATTTAAAGAAAATATGTAGAGGTAGCAGAGAAAACCATAAAAAATTACATGAT # Questionable array : NO Score: 2.83 # Score Detail : 1:0, 2:0, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTAATTAAACTATATTAGTTATAAAG # Alternate repeat : GTATTAATTGAACTATATTAGTTATAAAG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:86.21%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.60,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 3 95863-96348 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAMYK010000005.1 Clostridium botulinum C strain IZSVe-TV_7573_3_12 NODE_5_length_183088_cov_99.0826_ID_4227, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 95863 29 100.0 38 ............................. TATACACCAAAAGCTATTCGATTAAATACTAAATTAAA 95930 29 100.0 35 ............................. GAAGATGAAATTGTTATTGTTTCAGGCAAAGCTAG 95994 29 100.0 36 ............................. CCGCTAATTAATTTATTACTTTCTAGTTTATTTTTT 96059 29 100.0 36 ............................. AAAGTCAAGGTTTATCCGAAAACTTTTTGCTTGGTA 96124 29 100.0 36 ............................. TGTAGTCTATTCATTAAATCTATATTATATGTATTC 96189 29 100.0 37 ............................. TATGTTTCAGCCATACCGTCTAATCATCTCCTTTCTG 96255 29 93.1 36 .........G......A............ ATACATTGTTTTGTCTATATTTTGAAGTTGTTCTTT 96320 29 86.2 0 .........G......A......TA.... | ========== ====== ====== ====== ============================= ====================================== ================== 8 29 97.4 36 GTATTAATTAAACTATGTTAGTTATAAAG # Left flank : ATTATACGATGTAATTACATATACAGATAGTTTAGAAACAATAGAAAAATGTAAGGATGAAATTTTAGGATATGAAATAGCAAGTATTGATGATCTTAATAGTAGCGAAGTATTTGATGATACTTTTGGAGTTGATACACTAAGAGTCAAAGAGGGAATTGTTACATATAAGAGGCATTTAGTTGGATATGATGGCTGGGATATTGAAGATTATTTAGAAGTTGGTAAGTGGGAGTTAGTTTAGATAAATTAATAGATTTAGGATTAACTATACCTCATTTTGAGAGTGCTTAAAGGTAAAAACAAATAGAGATTTGCAGTGAACCTCCAGTAGTGTTTTTGGGTTAATTTTACAAATAGTGTTATAACATAGATATATCAATACGTCTAGCTATTTACTATAAAAAATGGTTCACTGCAAAATCATACTATTTATTTGAATTTTTATGGTCAAAATATGGGATGATATAGTATAATAGAGATATGAAAAGAAAAATAGG # Right flank : GAGGACTAACCTTTTAAGGTTAATCCTCTTTTTAAATAAAAAATCATAAATATCAATAACTGTGGTAATTAGTGAAGAATTATTATATAATAGCATTAAAAGGTAAATTTTATTTATAACTGATTGGAGATGAAAACATGAAAGGTAAAAAAACAACAATAGCTATAATTGTTGCGAGTTTGTGTTTGATAATAGGGGGAGTTTATTTTAATAAAAATTATAGATTTACTTGCTTTGATTCAAAACAAACATATAAAAAAGAATCTATACAAGATCTGAATAGATATTTATTAGATGCTGTAATATCAAGAGATTCAAAATTGTGTGAAAAGTTTTTAACAAGAGGAGCAAATCCTAATATTCCATTATCAGATGGAGATAATATATTTTATAAAGCTTTATTGGGTGGAGATGAAGAAATATGTGAATGTTTAGTAAAACATGGTGCAGATGCTACTACCATACACCCTCATCCTAAAACTATATATGATAACAAAACT # Questionable array : NO Score: 6.13 # Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTAATTAAACTATGTTAGTTATAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:82.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.10,-0.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //