Array 1 8852-7761 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JOTH01000002.1 Mycoplasma ovipneumoniae strain TC4 contig2, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
      8851	    36	 100.0	    30	....................................	TACTGGAATTTACAAAACTTTTATAAAGGT	
      8785	    36	 100.0	    30	....................................	TACTGGAATTTACAAAACTTTTATAAAGGT	
      8719	    36	 100.0	    30	....................................	GAGGAACTAAAAAATGCTGGTACTAACCAA	
      8653	    36	 100.0	    30	....................................	ATAATTCACCAATCTGCTGCTGACTTTTGA	
      8587	    36	 100.0	    30	....................................	ACAAATCCAAGAAAAGCCAAAAAAGAAACC	
      8521	    36	 100.0	    30	....................................	ACAAATCCAAGAAAAGCCAAAAAAGAAACC	
      8455	    36	 100.0	    30	....................................	TAAAAGCAATTTCTGTAATGTATTCATTTA	
      8389	    36	 100.0	    30	....................................	AAAAACCCCATCCTGGTTTGGCATCCGAAA	
      8323	    36	 100.0	    30	....................................	AAAAACCCCATCCTGGTTTGGCATCCGAAA	
      8257	    36	  97.2	    30	.G..................................	TAGCAAAAAAAGTGCCTATGGTGTAACATT	
      8191	    36	 100.0	    30	....................................	AAGATATTTTATTATTTGTCGGAGTTCTAA	
      8125	    36	 100.0	    30	....................................	AAGATATTTTATTATTTGTCGGAGTTCTAA	
      8059	    36	 100.0	    30	....................................	CTAGTAATCTAAATATCCAAACCAATTATC	
      7993	    36	 100.0	    30	....................................	CTAGTAATCTAAATATCCAAACCAATTATC	
      7927	    36	 100.0	    29	....................................	CTAGTAATCTAAATATCCAAACCAATTAT 	
      7862	    36	  94.4	    30	CG..................................	ATATGCTATTAAACAAAAAAACGCCGCCAA	
      7796	    36	  97.2	     0	...................................A	|                             	
==========	======	======	======	====================================	==============================	==================
        17	    36	  99.3	    30	GTTTTTGTGCTGTACAATTTCTTATTAGAGTAAAAC	                              	       

# Left flank :   TTGATTATCAAATTGATAATACTAAATTATTGAAGTCGCTATTTGAAATTAATCCAAATATTCTACTTTCAAAAAATAATTTTGCAAAAATAATGGAAATTGTTTTTGCAAACAAACCTGATCCTTTGGTTATATTCAAAGATTTAGAATTTATTAATTTAATTGACCTATTAAAATTTACAAACACAAAATTTATAATTTTAACTACTGATTTTACTAAATATATAAATAAATATGACCAACTAGAGCTTGTTGGCTTTTATAAAGATAAAACAATTATTGATATCAAAACACCATTACCAATTATTAGCTATTTTGAAAACCATAAAAATAAAGAAATTCTAGAAAGTGAACCTCTGTTTTCAGATTTAAATGGAAAAAACGAGTTTCGTTTTCACATTAACATCATCAAAAGAACATTTTTTGAGTAAAAAAACCTCAAAAAACAAGAGCTTTTTTGGAAAAAAGCAAAGAAAATCAGTTTTTTTCTTTGAAATGAG
# Right flank :  AACACTCAAAACCTGTAGTTATACTACATTCCTTGAGTGTTTTTTTACTTATTAATTAATTTTAAATTTTAGGGTTAAAGTACTAATTATTTTCTAACTTTTTTGTTATTGTTAATAAGGTATTCTTCCAATTTTCTTTGCTCATTAGATTCATATTCATTCCCTAGTTCGTCAAGGCTAACAAATTGAAATTCATTAAGAAGACTACTTGTTGAGCGTTTAATCGATTCTAACTTCTCCACAATCGATTCTATTGTGAATCTAGTATCCTTTTTCTTTTCTTTAGATATACCAGAAATATAAAAATAATGATTATCGTCTGCTCTTATAAACTTTGATTCTTTGGGGGTTTTCGCTTTTTCTTCGGTGGCTTTTTCTTTGTTATCTTCAGATTTGAGATTAAATTTTTGATCAAATTTCAATTTTAGAATTGCAGATTTCTTGATTATAAATATTGGTTTTGATCGATGATCAATACCCACATTGTCTTTATATTTTTT

# Questionable array : NO	 Score: 6.22
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTTGTGCTGTACAATTTCTTATTAGAGTAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:72.22%AT]
# 	Reference repeat match prediction:         R [matched GTTTTTGTGCTGTACAATTTCTTACTAGAGTAAAAC with 98% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [0.00,-0.50] Score: 0/0.37
# 	Array degeneracy analysis prediction:      R [3-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [75.0-75.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,4.91   Confidence: HIGH] 

# Array family : II-A [Matched known repeat from this family],   
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