Array 1 2029680-2028394 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP029758.2 Clostridium sp. AWRP chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 2029679 30 100.0 36 .............................. CCACCGTGGTAAAAGGGGCGTACATGGAAAGTATGG 2029613 30 100.0 37 .............................. TATCTTTGCCCTACTTTCTTAAACCTTTTTCTTACCG 2029546 30 100.0 36 .............................. TAAAATTCCTCCTTCCCTATTGACAATTTGAATAAA 2029480 30 100.0 36 .............................. CAATCTTCAAAATTAATGAAGCAATCTTCAAATGAA 2029414 30 100.0 36 .............................. ATGAAAAATTTACTATAAAGTTTAATAATCCAAGTA 2029348 30 100.0 35 .............................. TGGATAGATAGGAGTTGATTACATGGAAGAACACC 2029283 30 100.0 37 .............................. CAATTAGCTAGAAAATATCGCATAAACCGAGATGCAC 2029216 30 100.0 36 .............................. GCATATTAAATGTAAAGAGCGAAGAAGAACAAAGAA 2029150 30 100.0 36 .............................. CATTGTTGGCAACAAATGAAATATTAGATGAAATGA 2029084 30 100.0 36 .............................. TCTGCATATTCTTCCATTTGTTCATAATTTTTAAAT 2029018 30 100.0 35 .............................. CCACTTCCACAAGCATCGTAATTACTGCTATTTTC 2028953 30 100.0 36 .............................. TTACCAATTAAATATTTAGGTTTATCCTTTAATAAT 2028887 30 100.0 36 .............................. TTATAAACCCCCTATAAATTATTATCTTTAAATATT 2028821 30 100.0 38 .............................. TTGTATATATTGTGGATGCCCTATTGATAAATGGAAGC 2028753 30 100.0 36 .............................. TTTACCCATTTTGTTGGTTTTTCTACTCCTATATCA 2028687 30 100.0 36 .............................. CTGCTTTTCTTTGGGACTGGTTTAAAGATGCATCTT 2028621 30 100.0 37 .............................. TAGATGTAAGCGTCCAACTACAATCCCCCTTTATATC 2028554 30 100.0 37 .............................. GATAGTTTCTGGACGTATGCTAGTTGCAGAAGGCCAA 2028487 30 100.0 34 .............................. TAATAAGTTCCACAATCTATGCAAACTTTATCTC 2028423 30 80.0 0 .........T......T..C...AA....A | ========== ====== ====== ====== ============================== ====================================== ================== 20 30 99.0 36 GTTGAACCTCAACATGAGATGTATTTAAAT # Left flank : TATTGCCCCCTCTCGATTAAGGTATCTTAACCTCTTTCTTGCCAAATCATAACTCATCTTACTTGTAGAAAAAAATAATTTACTACACTGATCTATAGTTATACTGTTAAAATTTTCAATCCATTTCAAAATTCTTTTGTCTCTCTCAGTTATCATTTTTACCACCTCATATTTATTATGTGGTAATTTACATGGCAACTAATCTATATTACGCACAATACATTAAAAATTAACAAAATTCACATCTAGTCCACAAATTATGGTGTGTGATTATAATTGATCTACCCTTTTTAACGGCTTCTTTTGTATTTATGGTATAATATTTTTCCAACCTCATTGATATCTAAATGTAGCTTAAGTCCTTACTATATAACAACTTAGGGTACTTTTTTTATTATAATTTTAGAAATTAGAAAACGGTTGGAAAAATTTTAGATAAACTCTTTATTATCAATACTTTTAGGATTATAATAGAAACAAGAAATGGCTATTTTACACAG # Right flank : TGAAGCCTAGTAGTCTTAATTTTCCTACTAGGCTCCATCTTTTATTGAGCTACTGCTTGATCTAGAAAAAGAAGTAATAAAAATGCTCCTTTTTCTATTAATATATTTATTTCAATAAAGAATTCATTTTTTTATCTGATAATATAAATCCTATTCCAGACACTAAAGCCGCCAAAGCTCCAACTATAGCAGCTATGCCAATATCGCCAAACATATTAATTCCCATAATGATTCCAATAACTCCAATTACAATAAGTATTATGCCTATAGCTTTCATTTTGCTATTTCCTCCTTATTTTATATTGTATCCAACAGCCTTTCCGTCATTGTCTCCGTGTATTAATATACCATTTTCCATATTAAAATCTTTAGGCACTTCAAACACTACATAAGTTTGCTTAGGTGTATTAGGATTTACATCTTCATTTATTCCTACAAACTCACTATTTTTATTGTATATAGTTTCTTTTTGATTGGCTGTTTCTCCAGCTTCCATACTA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCTCAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.70,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.68 Confidence: LOW] # Array family : NA // Array 2 3756971-3756414 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP029758.2 Clostridium sp. AWRP chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 3756970 30 86.7 36 TCCC.......................... CCTGCACTTGAATATATAGTTCCGTTTGTGCCAACC 3756904 30 100.0 34 .............................. TTGTAAAGAATTATGGTACCTCCATTATTTTCGG 3756840 30 100.0 36 .............................. CGACTGTAGACCCACTTTTTTTAATTCTTTTGATAC 3756774 30 100.0 36 .............................. GTTTTTTGCTTATAGTAAGCGGTATAAGAATATTTA 3756708 30 100.0 36 .............................. ATCTATACAAGTTGATGCTTTGGCGGCAATTGCTAC 3756642 30 100.0 36 .............................. TCTTAAGAGGGGTGGCTTTTATGAAGACTTTAAATT 3756576 30 100.0 36 .............................. AGATACAGTATATGCTTCCTTAAAGGAAATCAATGT 3756510 30 100.0 35 .............................. CGTGAAACATAATTAATCTTCTTATCTAATTTATA 3756445 30 90.0 0 ..........................GC.G | AC [3756417] ========== ====== ====== ====== ============================== ==================================== ================== 9 30 97.4 36 GTTGAACCTTAACATGAGATGTATTTAAAT # Left flank : TTCCAGTTCTGACTGAATGTCTCTTGTAGACATACCTCTTGCGTATAATCCTATAATTTTCTTATCCAGTTCATTGCATACAGTTTCATATTTTTTTACAACTTTAGGTTCAAAGTCAGCTTTTCTATCTCTTGGTATATCAAGATTTACATCACCAACACTGCTCCTAATACTTTTCTTTGAGTATCCATTTCTATAATTTTTATTTTCTGAATCCTCACTTCTTTGATATTTTTCTCTGCCAAGCAGTTCTTCCATTTCTGCCTCAAGCATATTTTGTATAACATCCTTTAAAAGTCTCTGCAGCAAACCATTTCTGCCAACTACGTCCTCCATAGTTTTGCATTTTTTAACTTCTTCCTTATAATCGATATCTGGTACTTCAATTTCTTTCATTTGAAACTCCTCCTAATTTATTTAAGAATATTGTTCCAAATCTTCCATTCCATTATACAAAAATAATGGGTATAGATTTGGTTTTTACACAAATCCATACCCAT # Right flank : AAAATTATTTATATAAGTGATGTGTTAGGCTATAATATAATAAAAGTATTATTTGTTGGAGGAATTAATATGGAGAAGACAAATAAACAAAATAACTTATATGAACAATTCTTAAAATATTCGTATTGGGACTTAAAAGAATTATTTAAAAATGCAAAAACTAAAGAAGAACAGGATTTTTATATAACACTATCTAATCTGGTGCTGCAAAAAGAACAAAAAAGAGTAATAAGTGAGTAAAAATGGCTACATATACCATATATAAAACCTAAAGGAAGGAGCATTTTTGTGTTAACATTGATTGTGAGTGCATAGCAGGGGCTATTGCACAAATACAAATAGCCTTTGCACAATCCTAAAAATATATATTAGGAGGAGCACGGAATTGGGCTACAAAAAAGCAGCAGATGTATTGCCATCAGAACTCGTATCTCAAATTCAGGATTATATTGACGGCGAATATATCTATATACCAAGAAAACAATGCAACAGAAAAACCT # Questionable array : NO Score: 6.13 # Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCTTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 3 3758508-3759464 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP029758.2 Clostridium sp. AWRP chromosome, complete genome Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 3758508 30 100.0 36 .............................. CTCCTTTGCTATGTTCCAGTTCTATAATCTTTTTCT 3758574 30 100.0 36 .............................. TTAATATGAAAAATTCTATCTGTTGCAGAAGGAGAC 3758640 30 100.0 37 .............................. TTTCACTATCTCCAGTAATCATAAAGTATCTAGGTTG 3758707 30 100.0 35 .............................. TTAAAGTTACTTCCTTCTAGTCCTTTTTCTGCTGT 3758772 30 100.0 36 .............................. TGTAATTTTTGTAACACAATTCGACAAATTAATTGA 3758838 30 100.0 36 .............................. GAAGTATGTTAGTTCTAAGTTTTTAGGTAAAAAGCT 3758904 30 100.0 37 .............................. CTTACTTCTGTGACAAGTGTCCCATCTACTTTATCGT 3758971 30 100.0 37 .............................. TTTAACACTTTCATCTTGTATTTTGTTTACTAAAGAT 3759038 30 100.0 36 .............................. TAGCCTTGTGCCTTATGTCCATTTACAAAAATATCG 3759104 30 100.0 36 .............................. TGGTGGAGACAGTACATCGATAGCACAGGCTATATT 3759170 30 100.0 37 .............................. CTTATTCGGATGTTAGAAATAAGGTTTCTGATTGGAT 3759237 30 100.0 35 .............................. GTTGCTGAAGGTGTTGCTAATTTTAATAGTAATGG 3759302 30 100.0 36 .............................. AGACTCTATTTTCCAAATCATAACAGGATGCAATAA 3759368 30 100.0 37 .............................. GGAAGGTAGGATTAAAGATGTATAGATATTATTCAAC 3759435 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 15 30 100.0 36 ATTTAAATACATCTCATGTTAAGGTTCAAC # Left flank : AGTATAGTAATTGAATCCTGGTATAATAACTGGGATAAGTTATCAACATATTTTAATTACTCACCGGAAATCAGGAAAATTATTTATACTACAAACGCATTAGAGGGTTTCAACCGACAGCTTAGAAAGTTTACGAAGATAAGAACAGTATTTCCAAATGATGAAGCACTTAGAAAATCTCTTTACCTAGCTACTGAGAAAGTCATGGAAAAATGGACTTCTCCATCCCAAAATTGGGGAATGACATTGGCACAATTAACTATTGTGTTTAATGATAAACTAGGCGAAGAGATACTCTAAGATTTAGCTAAAATTTTTATATTTTTTCTTATTTTATTGCATAATTAAGTATATTATACAAACAATAAGAATGTAATATTAATCAGTATTAGTATTACTCAAATATAAAAAAATATAACTGAAAATCAAAATTTCCAGTTATATAAAACTAAATCAAATCTATTTTACACAAATCCATCTATATTCTCCATTTCATAGCT # Right flank : CCACAGTAAAATACCCATTCCTTATTTTCATTATAGTCCTAAAACCCTTAATAATAAAGGCATCAGCTGAAAATTTTCCAACCGTTTTTTAATTTTCATAAACTCAGCCAAAAAAATGCCTCAATTCATTACATATCAATGTATTTAGGCACACTTTACCTTCAGAGAGGTTGGAAAATATCTGACCTGTATACTATCAAAAACATTAGTAAGTCTTTCATTTAATAAAATAGTCTCCTAATATAGTATTTTACTTTAAAGCATTTTTACAATATTTACTATAGTAATTCAACTATATGTTCATTTTTTTCACTAGCTTATTTAAACTGTTCAAATCCATAATTCTATAACCACAATCTTCCTTATGCAATATGCCTCTTTTACAGAAATCAGCCAATACATATAAGAGATGGCGGTAACTAACACCTAAAAATTCTGATGCCTCAGTATGTTTTTCCGTGTATAGTAATTTATTGGATGTTAAGAGAATAAAGGCTGCT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTAAATACATCTCATGTTAAGGTTCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [76.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA //