Array 1 21109-23274 **** Predicted by CRISPRDetect 2.4 *** >NZ_SSOR01000009.1 Corynebacterium amycolatum strain ICIS 5 contig_09, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 21109 29 96.6 32 ............................G TATGCGCCGAGGGATGCGGGTGAGCTTACGAG 21170 29 100.0 32 ............................. TAGATTTCTTTGTTCTTCAGGCCACCCCAAGG 21231 29 100.0 32 ............................. GACACCGAATCTCCTGGGGCTAACCCGAGGTC 21292 29 96.6 32 ............................T CGGTGACATTAAGGATATTGGTCTGCGGCCGA 21353 29 100.0 32 ............................. GCGTCAGTCCACCCTGCTGCGACCTCGCCGGT 21414 29 96.6 32 ............................G TCACATGTCGCGGGTTCGAAGCATGTTGCGCC 21475 29 100.0 32 ............................. GTGATCCACGACCCGTAGGGCTGAAAGCCGCT 21536 29 100.0 32 ............................. GGTGACTGTGAGCGTGGAGGTGCGTCCGAAAC 21597 29 96.6 32 ............................T GTTTACCAGTATCGGGCGTATGCGGAAAAGAA 21658 29 96.6 32 ............................G AAGAGCGTCGGCTGCGTATTGAGGGGGAGCAG 21719 29 100.0 32 ............................. ACCTGGATGCTGAACGTTGCGTTGTCGGTGAT 21780 29 96.6 32 ............................G CTCGCACTGTTCATTAATCTGATGCGCTTGTC 21841 29 96.6 32 ............................A GAGTTAAGAAAAAGAAGTATGTGGTGGCAGAC 21902 29 100.0 32 ............................. AAGAGAAATTAGTTGGATTGGAGCGTCGAAAC 21963 29 96.6 32 ............................T CTGCGGCCACGGCTCACCATTCGGCATCCGCT 22024 29 96.6 32 ............................T GATGTTCTCACCCAGGATAACCGGGTGAGCCT 22085 29 96.6 32 ............................G AACAGCGCGGCAGTCGCACCCGTCGTGGTACC 22146 29 96.6 32 ............................G CATGGCTGCGGGCAAGCTACCCGCAAATCCCG 22207 29 100.0 32 ............................. CCACGCGTAAGCGTCGGTCTGCCCGTCGCCGT 22268 29 96.6 32 ............................G TGGTCGATGACCGTGGGCGACCCGCGCACCGA 22329 29 96.6 32 ............................G CAGAAGTGGGCTGACCTCGGGCCTGCGATGGG 22390 29 100.0 32 ............................. AGGTCAAAAGTCAGGGCAGACTCCACGCCCTC 22451 29 100.0 32 ............................. AGCCGACTTCTTCAGCACTGACCCCATGCCCG 22512 29 100.0 32 ............................. TTAAGATCCATCGCGGTCACCCACCTTTTTGA 22573 29 100.0 32 ............................. CAAGGGCTGCTTAGGCAGCGCCGACAGTGAGC 22634 29 100.0 32 ............................. TGCCAGTTCGCGGTCTTACCAACCGCATCCGG 22695 29 96.6 32 ............................T GAGTACCGGAAGGGCTGGCTGGGCACGAAACC 22756 29 100.0 32 ............................. ATCGGTTCGGCTGTCGCTCAGGCTTCCGCAGC 22817 29 96.6 32 ............................T CCTGCGTTGGGGAAGCGCATGTCGTTTGAGAC 22878 29 96.6 33 ............................A CACCTACCCGGCTTCTGAGGCTGACTACGGCTC 22940 29 96.6 33 ............................A CACCTACCCGGCTTCTGAGGCTGACTACGGCTC 23002 29 96.6 32 ............................G GCTAAACCGCAACGAACCCTCAGGGCGACTGC 23063 29 96.6 32 ............................G CCCTCAAGGGTGGACTGTTCAGCCATTGCTGT 23124 29 96.6 32 ............................G GTGCCCAGCATCTCCTGGTAGTTGGCGATATC 23185 29 100.0 32 ............................. GAAAACGCGAAGGTCTGGGTGTGGTCGTTCTG 23246 29 86.2 0 .....................TA....AA | ========== ====== ====== ====== ============================= ================================= ================== 36 29 97.7 32 GTTTTCCCCGCGCGAGCGGGGATGTTCCC # Left flank : AAACGAGGAATTCGGCGAAGTTATCGAGTTGTGGGATTACAGCCGTGGCGCGATTAGAGGTGGTACAAATTACTCCTCCGGAGAACCGCCATGGTGACAATAGTTTTGACGAGCTGCCCTGCCGGGTTGCGGGGCCATTTAACTCGATGGCTTGAGGAAATCTCCCCAGGTGTATTTGTTGGGAAAGTTAACTCTCGTCTCCGTGACATCTTGTGGGGACTCGTCATCGAAATGGTTGGCAATGGTCGTGCAATTATGGTTTATCCGGATCGGAATGCCGAACAAGGGTATGCCTACAAGGTGCATCGCCATGATTGGGAGGTTGTTGATGTTGAGGGGCTGTCCCTGATTCGGCGTCCGTTCAAAAACAGGACTAAAGGTGATGTCGGATTACAACCGGGGTGGTCAAATCCAGCCAAGCGGCGTCGTGCTCGACGTGCTCGTCGAGCTGAGTGATATAAAATTCTTCACTGGGAACTGAAATCTGCTGGTTATTAAGT # Right flank : AGTTTGATTATGAGGGGATACTATCCCCATAGAAATACTCAGGAGGGTAAACGCATGACAAGGTATTGGGATCACAGCGGCAGTATCTACAAAGATGACGGTCAGGAAGACTCGTTCGTCCCAATCACTGAGCAGCAGGCACTCGCTGAGATTGCAGAAAAGCAGAAGCTGCATGAGGAATGGGCGAAGAGCAAAATCAAGGAACTGCGCGCGAAAATGGAAGCTGCCGCAGCGCAGGCCAGGCAGGCCACCGAACAGCCGTATCCAACTTTTTCTCAGCAATCCGCCGCATACCGTGAGGGTGCACAGGCCTACAACGAGGGCAAATCTTGGCGCGATAACCCGCATGCCCCCGAGTCAGGTCTAGCAGCCCCGTGGCGCATGGGCTTCAATACCCGCAAGCAGCAGGTAGCGGAGATCAGGGCACAGCGAGCCGCCGCCGCGCAACAGGAGAACTAGGCCCTGGCCGCAAAAACGCTCAACCAAAGCTCTAAATTCCC # Questionable array : NO Score: 5.74 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.59, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCCCCGCGCGAGCGGGGATGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCGAGCGGGGGTGTTCCG with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //