Array 1 957-1405 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHANI010000025.1 Vibrio metschnikovii strain M7D Scaffold25, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 957 28 100.0 32 ............................ AGCTGGAAAGTTTCATATGGTAGCGTAGGAAT 1017 28 100.0 32 ............................ TCTGAGGGCTGGTTTAAAAAGCTGCTCAAGTA 1077 28 100.0 32 ............................ CGTTCGTTTCCTCGATAGTTTCTGCGCTTACG 1137 28 100.0 32 ............................ TGATCAAGTAAGATGTTCATCAATGCATAAAC 1197 28 100.0 32 ............................ CTACGCCAATGCGCCAGGCTCACCTTACCCTT 1257 28 100.0 32 ............................ TTAAAATCAATTACAGGAGGTTTTATATAATT 1317 28 100.0 32 ............................ TACTCCCGACCCTGACCCTGAGCCAAATCCAG 1377 28 100.0 0 ............................ | A [1400] ========== ====== ====== ====== ============================ ================================ ================== 8 28 100.0 32 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : TGTCTGGTTCTGCTCTGATAAATTGTGTTCGTAAAAGGTTCAATTGTTGCTGAAAGGTCTCTTCCTTTGGTGTTGTTTGCCCATTGATTCCGCAGGCTAATTCGCTTCAACCTATTTGGGATCTTATCGGCAACAATACTTGCTGAAAGTAGGCAAGTTTATCATTTTGAGTTAAAGTATTCGCAAGCAATAAATGTTGAAAAAGTTCAATTTAATCAATAAGTAATAAAGCATAACAAACACTTCAAGAGGGACTTCCAACGCGCGGCATTTTCATTATGCGTTGGCTTAAGTGATTACGGTGTTGTGCGGAAAGTTGGTAGTCGCGTTGTCAGCCCCTTAAGTGGGCGTTAACTGGCAATAAAATTACCCATCTTTTTTCGTTGAATTTTAAGTCATTGATTTATATTAATAATAAATCGAGTGAAAAATAAAAGGTTATTTTGAGAAATTTGATGTAATTACTTTTATTAACAATAAGTTACTGATAGAGTTTCATT # Right flank : ATTGGTAATTTTGGCATTTGGGATCGGCCAGTTAACAAAGCGTTAAAGAGGGATTCGCAACGCGTAGCATTTTCGTTATGCTTTGATTTTATTAGTTTTCAGTGCAATGCGGTGAGTTGGCAGTTGCGTTGCTCACCCCTTAACGCGGCGTTATGTGATATTGTAAATTCGGCTACAAAAAGGAGAATTTAGTGGCTAATTCAGTGGTAATTCAACAATCAAATAATCAATTGAAAGTAAATTCGGATGCTTATGATTTAAGCCGAATTGTTGGTGTTGAAGTAAAAGTTTTGACGTTCAAAGACCATCTTTTGAGAATGCTCCTTTTGGGTGCAATTTCATCGAGTTTACTTTTTATCTTTATCCCATCAGAACATCACGAATATGGATTAGCTTTTGCGTCTTTTTTGCCATTGGTAGCGTTTTTGTTCGGTGCTTTTTTAGGTTTTGTTAGCAGTAACAAATACGAATTTCGTTTGGAATTTAATCACTTAGATGAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 301462-302690 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHANI010000003.1 Vibrio metschnikovii strain M7D Scaffold3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 301462 28 100.0 32 ............................ AGCCACGTCATGTAACTCGTTGTTGTAATACA 301522 28 100.0 32 ............................ GCGCTGGGATTGGTGTCTTTTTGCATAGAATA 301582 28 100.0 32 ............................ AGCAAATAACTTGAGTCTAGTCTCAATAGTTT 301642 28 100.0 32 ............................ GCGACTTTGCGCAAATCAAGGGATCGCCGGAA 301702 28 100.0 32 ............................ CTTTGTGCATTGACGTGCAAACTTGTGATGCG 301762 28 100.0 32 ............................ GCTAATGACTTTAAGCTAGGCCAGACAGCCTA 301822 28 100.0 32 ............................ TGATGAATATCACAAGCTCAAGAGTTCCCCTT 301882 28 100.0 32 ............................ ATAATCCTATCTTCGGCAAGCTCTAGCAGGTC 301942 28 100.0 32 ............................ GATAGAATGCGGAACACTTACAACGCAATCAC 302002 28 100.0 32 ............................ TGCCACTCAGGACAAGTTAGGTTACGAGGCTT 302062 28 100.0 32 ............................ AGGAACCGAGCGGCTTTTTCATCGTTGGCTAG 302122 28 100.0 32 ............................ GAGCTGAATCATTTGGTTTTGCATTTGGAATT 302182 28 100.0 33 ............................ ATTCAGCAATGTTACGATTCGCGTAAACTTTAC 302243 28 100.0 32 ............................ GCTAAAACCTCCACGCTGAAAATACAACTGGC 302303 28 100.0 32 ............................ AGTGTGCCGTCTTGGAAGTAGAAGGCAAAACC 302363 28 100.0 32 ............................ CGCCATGGACCCCTCGTCTAACACGACAAGAT 302423 28 100.0 32 ............................ TCTCGCCACATCGGGCATGGGTATCGATGAGT 302483 28 100.0 32 ............................ ATATACTTACCGCAATCAACACAGCGATACCT 302543 28 100.0 32 ............................ GCTAAATATTCCAGTGAAGTCCTTCCAAAATG 302603 28 100.0 32 ............................ AGAACGGCCATGTTTCGATTAATGGGGATTGT 302663 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 21 28 100.0 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : GGATGTGACTTACGTAAGCTTTGTGCGCAAGCAGGTGAAATCGCCCGAGCGAATAGAGCGGGATATGCAGCAAAAAGCGGCATTATGGGCAGAAAAATCTGCTAAACCGCTGGAGGAATGCTTGGCCGCTTTGCAACAAAGCAAGCCGACAGCATTGTGCCGTTTGCCGTTTATTTACCTACATAGTCAGCAAACTAAGCAGCGATCACCCGACAAAAACAGCAAGTTCCCGTTGTTTATTGAAATGCAGCAACAAAGCGCTTTACAAGATGGTCATTTCGATTGTTATGGACTGAGTACTAAAGGGAATGGGCTTCCTACGTTAGCCACCGTACCGCATTTCTAAAATGAACGAAAAAGGGTATTTTTACCCTTTATTTTTGCTCTTTAAAAATAAGCTTTAAATACAATGGGTTACAATGGACGGTTTTTGATAAGGTAAAAATACGATTTTTATCCTAACCAACTGTTGTAACTTATTTTTATTGATTTATTCTATA # Right flank : ACGCCGGATTCGATGGAATCAAACTCCCGCCAGTCATCCCCGCGAAGGCGGGGATCCATTCTGCAACAGATGCCAAGTGCTTAAGTGAGCGATCAATTGGCCACAGATTACTGATACTTCGCATAGATTCCCGCCTACGCGGGAATGACGGTTTGGTTGTGGTTTTGGGAGCTGAACTCCATAGATCCCCGTCATGTTTTGCCTGCTACTGCTGTGAGGCAGAAAATGAAGGCGTAGCGATCATCGAAAACTGATCCACTAAATACACTTAGTCAGCATAGATTCCCACCTTGAGGGCAATGATGCTTGACGCTTTGAATACTCGATTGTTCACCTTGATTACAAGAAAGCGTGAGTTGTTTAACAATATGTGCGCCTAATTCCTTAGACACTACGTTGTATGATTGATGTGAGTGGTGGAACACATGAGCTCCCTAACGTTACCTTGCCAGCGAGAGATTGATCTCTCATCAGAGTTAAACGTCGTATTACAAGACAAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [80.0-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 3202-2753 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHANI010000041.1 Vibrio metschnikovii strain M7D Scaffold41, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 3201 28 100.0 32 ............................ AATACTCATGTTTATGTATTCCATATCTAGAT 3141 28 100.0 33 ............................ GCCGGAGCGGTTCGCTTTAGTGCGCTTTGATAT 3080 28 100.0 32 ............................ TTTAGTCGGTTTGGGTGGCTATTTTTCAGAAA 3020 28 100.0 32 ............................ TTTCTCGCATGCGAGTGAAGAATGACTCAAGA 2960 28 100.0 32 ............................ CCGCCGTTTCACTAATGAACGTGACATCGTTA 2900 28 100.0 32 ............................ AGCGAAAGAAATTAACGTTTACGACATTATTC 2840 28 100.0 32 ............................ TTGCGGCATGGCTTTCGGCTTTGGTTGATCAC 2780 28 96.4 0 ........................A... | ========== ====== ====== ====== ============================ ================================= ================== 8 28 99.5 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : GCGCTATAACAAGGCGTTCAAGAGGGATTCGCAACGCGCAGCATTTTCGTTATGCATTGATTTTATTGGTTTTTAGTGCAATGCGGTGAGTTGGCAGTTGCGTTGCTCACCCCTTAACGCGGCGTTAACTGGCAATGAAATTACCCATCTTTTTTCGTTGAATTTTAAGTTGTTGATTTATATTAATAATAAATCGAGTAAAAAATAAAAGGTTATTCTTAGGAATTTGATGTAATTACTATTATTAACAATAGGTTGCTGCTAAAGTTTCAT # Right flank : TATTTATAACTTAGGCATTTGGGATCGGCCAGTTAACAAACGCCTTAAAGGGACTGCCAACGCGTGGCGTTTCCAGTCCCATTGAGCCGCGGTGGTTATGGTTGTTGTGATTGAGTTTAGTGGTAATGCGTTGTCAGCCCCTTAGGCGGGCGTTATGCTTAATCCATTAAAATCTGTAGTTTGTGGTTGTCGACTCCTTTGGCATTTCATTCAGGTTTTGTCGGCAATTCAATATTGTTTTTCGCTGCCTAATGAAGCGGCAATGTATCTGACGTTGTAAATTCTGAGTGATTGCCTCATTGGAATGTTGAGTCTGTGCGAGGTGAGTTTTGCTGGCTCAAGTCGTTTTGAGCAGTTTGGTGCCTTTACTTACAGGCTGAAAGTCAGTCGGCAATTGAGCATTGTTTTGCGCTGCCTAATGAAACGGCAATGTGTCTGTCGCTGTAAGTTTCAGAGTGATTGCCTCATTGAGTTGTTGTGCCCCCATGCGTGGTGAGTGA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 2695-1406 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHANI010000042.1 Vibrio metschnikovii strain M7D Scaffold42, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 2694 28 100.0 32 ............................ CGCCTCAGAGATGCCTCGTAATTGTCAATCTC 2634 28 100.0 32 ............................ TATTACCTGCGTTTGTCCTGAGTGTGGCTCTG 2574 28 100.0 32 ............................ CAGCTTTCCCGATCCCGTCACTGGCGTGACTT 2514 28 100.0 32 ............................ TCTACGCGGATACGTTGAAAATCATCATTGCG 2454 28 100.0 33 ............................ AGCAGGTACAACGCTGTAAGGTTTGATGTTGAT 2393 28 100.0 32 ............................ GTGGTGTTGTGTGGCAGTTCTCAGAAGAATCT 2333 28 100.0 32 ............................ ATATCATGCATACCGCTTTTGGCGGTTTTCAT 2273 28 100.0 32 ............................ GAAGCGGTTAGCTCTGGGCTGCGAATAACTGG 2213 28 100.0 32 ............................ CGCTTCCGTTGAACCGTCAATACTTTGCATCA 2153 28 100.0 32 ............................ AGAACGCGACAGCTGAACGCACAAACTAAGAT 2093 28 96.4 32 ..............C............. TAACCCCCACATCGGTTTGACTAGTGTTTCTA 2033 28 100.0 32 ............................ TGACAATTCCGTATCCGTCTATATGTTCGGCG 1973 28 100.0 32 ............................ TGTATATACGCCATACAGAAACGAAAGCGTCA 1913 28 100.0 32 ............................ ATCGCTAAGCCTATCATTGCTTTTTCTTTATC 1853 28 100.0 32 ............................ ATGTGTTCGTTCGGAGAGTAGCGACCGTAGTT 1793 28 100.0 32 ............................ TTGGTTGTAGAAAGGAGATAAATCCCATTCTT 1733 28 100.0 32 ............................ AGCGGAATAACCGCTAACAGCCTCACCGCAGC 1673 28 100.0 32 ............................ GACACGATTAAATGACGCTAAGATATTGGAGT 1613 28 100.0 32 ............................ AGAGAACATAGAAACCATAGTTTCTAGTCTTG 1553 28 100.0 32 ............................ TTGCCAACTAAATCAGTATAATCAATAAGTAA 1493 28 100.0 32 ............................ TGTGGAGGCTGGGGAGTCAGTCGCAGCTAGGC 1433 28 89.3 0 ........T....C..........A... | ========== ====== ====== ====== ============================ ================================= ================== 22 28 99.4 32 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : ACGCTCAAATTATTTCGGCCATCAACGAAGTTAAGCTCAAGAAAGGCGTTGTTACAGATCTAAAGCATAGGCAACATGTTAAAGAGCTGGTTGCTTTAAAAGAAAACATAAAGCAATGTTCACGTTGTGGCTCTGATATGGTTGTGCGTGAAACCAAGCGTGGTGAAGATAAAGGTAAACAGTTTTGGGGTTGTTCTTCTTTCCCTAAATGTAGGTCAGTGGAAAAATTCAACTAACAAAGCATTTAAGAGGGACAGCCAACGCGTGGCATTTTTATTATGCGTTAGTTATTGTGATTACGGTGTTATGCGGTGAGTTGGTAGTAGCGTTGGCTGCCCCTTAATGCGGCGTTAACTGGCAATAAAATTACCCATCTTTTTTCGTTGAATTTTAAGTCATTGATTTATATTAATAATAAATCGAGTGAAAAATAAAAGGTTATTTTGAGAAATTTGATGTAATTACTTTTATTAACAATAAGTTACTGATAGAGTTTCATT # Right flank : ATGGGTAATTTTGGCATTTGGGATCGGCCAGTTAACAAAGCGTTCAAGAGGGATTCGCAACGCGTGGCATTTTCGTTATGCTTTGATTTTATTAGTTTTCAGTGCAATGCGGTGAGTTGGCAGTTGCGTTGCTCACCCCTTAACGCGGCGTTAGCTTCTTAAAGGCTGGAATCATCAAAATCCAAACTCAATCGTTCTGAAAAATTATCTTTTAGCGTCCAACTTGCACAAGTTGGTTTTTGCGTTTTTTCTTGATGCTGATTTGGTCGAACGTGTTGAAAGTTCAGTGGTTTCAAAGTCGCTGAAAATCATCAAACTTCGATGCTTCAATGTTGTTGGACGTTCCACACAGAAAGTTTGGTTTCATAAAAGGCTGCATCATCGCTGTGATCTGGTTTTCTTTGTCGCGGACTCTTAACCGTGGCCAACTTAACCTTGATCATTTTGAGTTTTGGTACCCAACCTCACAGCTTTTGGCGTTGGACGTGTGTTTGTGAGAT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //