Array 1 429270-427867 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHLGG010000002.1 Clostridium perfringens strain QHY-14 NODE_2_length_851636_cov_429.738358, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 429269 29 100.0 37 ............................. GATTTAATGACAGATAATGCTATAGAAGGAACTAATG 429203 29 100.0 36 ............................. TTTTCATCTGTATACATACAATCTATAGTTTGTCCA 429138 29 100.0 36 ............................. ATGTGTAAATGGAGAATCTTCAAATTTAAAACCATA 429073 29 100.0 37 ............................. GTAGTTGCTCCAGTAGTTGCTGAATATGGTTTTGAGA 429007 29 100.0 37 ............................. CCATTAAGGTAAGGCACTTGTACTCGCAATATAAGTA 428941 29 100.0 36 ............................. GGAAAAAATACCCTAAAAGTTGTGAGAAGTGTTCAC 428876 29 100.0 36 ............................. AAAAGGAGAGTTAAAAATAACTACTGATGATGGAGA 428811 29 100.0 36 ............................. TATGAAGATGTAGAAAGCTGTATGAATAAAGCTAGA 428746 29 100.0 35 ............................. CTTTTTACCACCCATGAAATATTCCCCTTTATTCA 428682 29 100.0 37 ............................. TCAGAATAAAATTCACTTACATAATCCATAGGGGTTT 428616 29 100.0 36 ............................. TTCTCTATATAAGAAACATGAGCTTGGGTAATTCCT 428551 29 100.0 37 ............................. ACATGCAAACGTGAATTTGAAGCTGATGATATAGAAG 428485 29 100.0 36 ............................. ACTGTTAGAGTTCTTTGGGATATAGCAGACTATCTA 428420 29 100.0 36 ............................. AGAATAGTATACAAGTTCTTATAATAAATATTATGC 428355 29 100.0 36 ............................. TATATAATATCATCATCACCCGTGATTTTTATATAT 428290 29 100.0 37 ............................. GAAAAGTTAGAGGAAAAAATTTATAGAAGAGAGAGTT 428224 29 100.0 36 ............................. TGTTTCATGTGTACCTTGAATAACTAAATAACCATC 428159 29 100.0 37 ............................. ATAGAAGGATCTTATGACGAATGGTTATATGGATGGA 428093 29 100.0 36 ............................. TTCTGATATGGCAAATGAAGTTTTAACAGCTTACAA 428028 29 100.0 37 ............................. AAATTATTAGCTGCCCATTTTAATTGAGTATAAGTAG 427962 29 100.0 37 ............................. TTGCTTTTTAAGACACATTCTAAATATGTGCCTTCAT 427896 29 86.2 0 .................GAA....C.... | T [427869] ========== ====== ====== ====== ============================= ===================================== ================== 22 29 99.4 36 GTTTTATATTAACTATGAGGAATGTAAAT # Left flank : AACTTAGAAATATAATATCTTTTGATATAATACCTCAATGTATTTATGAGAAAAATGAATCAGAAATTGAAAGCTTACTTGAAATTATAAATGATGAAAAAACAGATAAAATAAATAGAATAAAATCCATAGATAAAATAAAAAGTTTTACAGTATCAGTTGGGCAATATGATATTGAACTTTTAAAAAATAAACTTATTATGGAGTTAGAAGTAGGAAAGTATGAAAGAATTCCAGTATATAAATGCAATTATTCAGAGTTAGGATTTACTAGAAACACTAAAGAAGATGTATATGATAATTTCATATAAAACTAATTTTGCAGTAGATCTATTTTCTTATAATACTAGCTGTAACCAAGTAATATCAATGGTTAGAAGGAGATTTTTATTGATACACTAAAACATTACTGATGGTCTACTGCAAAATTTTAATATTTATGATAAAATTAACAATAGAGAATGAGTCTATTACTAGCTTTCAGCATTTTGAAATTTGGG # Right flank : ATATAAAAAGCATCTTCAAACTTAAAATCATACTTTTAAACTTATAATTTTTTGTTTCAATAGCAAGTGAACCTAATGAAGATATATTTCCAACAATGTTTTGGCTTGCTTTATATACAACATTGCCATTTCAAAGTGTAATAAATCTTTTAGTAGGCTATAACATAGAGAGTTTGTCATATTTAATACTTCCAACATATATGGTAACATTAAGCTTATTAAGTTATAAGGTACTTAAATTTAAACCTCAAAAAAATAAACAAGATAAGTAATTTTAGTTTTATAATAAGAATTAAAAAGTAAAATGGACATGATATCTGTCCATTTTTACTTAATTATTAATATATACTTATTAAATTAAATTTAGAACTTTGAATCTAATAATCTATGCATTTAGCAGTTTAAATCTAATAGCTCACTTGAAATTTCCTCAAATCTTTCATCAGATATACCAAGTTTTTTCTTAAATATATCATCATCAATTCTAGCAACAATAACCT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTATGAGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: R [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [83.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.91 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //