Array 1 1162841-1162036 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP069892.1 Streptococcus anginosus strain FDAARGOS_1357 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 1162840 37 100.0 34 ..................................... TTTTATTTTAATACCATTAAATTAACTATCTAAA 1162769 37 100.0 35 ..................................... TTCGTGTAGCTTAGTCCATGTATCGTTCATTTTTT 1162697 37 100.0 34 ..................................... CAACTTGTTCAATCATTTATAAGCTCCTTTTTAT 1162626 37 100.0 34 ..................................... TTGAAAATGTTCCAATTTCACTTTCAATATAAAG 1162555 37 100.0 34 ..................................... TATCGAATGATACGGGTATCTTTACCATTTGAAC 1162484 37 100.0 34 ..................................... AATCTTATTACTATTCTTATCGAGAACGCCTTTT 1162413 37 100.0 13 ..................................... TGTGTGTGTGTGT Deletion [1162364] 1162363 37 100.0 37 ..................................... AATTGTTCCATTGTATCATCGTCAAACATATCAAATG 1162289 37 100.0 37 ..................................... AATTGTTCCATTGTATCATCGTCAAACATATCAAATG 1162215 37 100.0 36 ..................................... GCTGAAAGCGTCACTTGATTATTTTTAAAAACATTT 1162142 37 100.0 34 ..................................... CTGGTTTCTTTTCTTCAATAAAATCCCGTACATC 1162071 36 91.9 0 ...............................A-...T | ========== ====== ====== ====== ===================================== ===================================== ================== 12 37 99.3 33 GTTAGTAACCTATATTACCTCGAGAGGGGACGGAAAC # Left flank : CAAGCTAAACCTGTCGCACCCAGATGCCGATGCTATCATTGACTATCTGGAGCATGAGATGAAGAAGGAGCATGGGAGTGAAAGCAAGGAAAGAGTCTATAACAAGACTTCTACTTTAAACCTTTTGTCTTTTAGCAATATTTTGGAATTTTATCAGGCGGAAGAGTCTTTACTGGAAAGTATCAAATTAGTGAAGAGTTTTAACGGGGAAAGAAATCGTCTAGCGCATGGTCTCGCTGAAATCGATAAAAAGGCAATTAGCTCAAAAAGATTGCGCGCCTTGTTGGGAACATTAAAGGATGTCCTCCAGTCCAACTATGATATTAGAGAAGAACGATTCTCCTATTACGATGTTAAGAATGAGGAGTTACTTGAACTGCTCAAGTAGCTCTCAGTTCTTCCTTTTTGGTTCAAAATATGTTATAATCAAAGAAGTTTCCACTTTTGGGCTGTTAAAACAAGATATGGTGGTTTTCTGGTATTTATGTACAAAATATAGG # Right flank : AGATAAAAATCGCTCTAGTGGGCGCTTTTTGTTATTTTGAAGTTCAAAAGTTCTTGAGGCAAAATGTCTCTTAGAAGTTTGAATTGCAAAAGAAGACAAAGGCTGTCTATTTTTTGTAAAAAAACCGAAATTTTAGTATAATGGAAAGACTAGAAGTATGAGGTAATGCGATGGAAATGAAGCAAATTAGTGATACAACGATTAAAATCACGATAAAATTAGAGGATTTAGAAGAACGTGGAATGGAGATGGCAGATTTTCTTGTTCCGCAAGAAAAGACAGAAGAGTTTTTCTATGCAATTTTAGATGAGTTGGAAATGCCAGAGAGCTTTTTAGATAGTGGCATGCTCAGTTTCCGTGTGACACCAAAGCCTGATCGTTTGGATGTGTTTGTCACCAAGTCTAAGATTGATAAGAATCTGAATTTTGATGATTTGGCGGATTTGCCAGATGTAGAAGAGCTGTCTCAAATGTCTCCTGATGAATTTTTAAAGACATTA # Questionable array : NO Score: 6.07 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:-0.14, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAGTAACCTATATTACCTCGAGAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.05%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.00,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 2 1172304-1171542 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP069892.1 Streptococcus anginosus strain FDAARGOS_1357 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 1172303 37 100.0 35 ..................................... CATAGACCGTTATCGCAAGAGCGAAAGCAAGATAG 1172231 37 100.0 36 ..................................... TGTTAGCTCTGAACATTTTCCAAGCTGCTTTGAATA 1172158 37 100.0 36 ..................................... TGTTAGCTCTGAACATTTTCCAAGCTGCTTTGAATA 1172085 37 100.0 37 ..................................... ATTCAACCGTTACGCAACAACCTCTTGGTGGTAAAGC 1172011 37 100.0 36 ..................................... TATATTTATCGTAGATGTGTTATTGCCGATATCCTG 1171938 37 100.0 34 ..................................... AAGTCATGTTTTCGATTTTACTTTCTTTTTTTCG 1171867 37 100.0 36 ..................................... TTTTGTTCTGACATAATTGTCCTCCTTCTTAATTTG 1171794 37 100.0 35 ..................................... ATTGCAGACTTCACATGTGTCTAATTCTTCGTCTG 1171722 37 100.0 36 ..................................... CCTTCATCTTTTCTACCATGTGTTTGGTAAATGGAG 1171649 37 100.0 34 ..................................... ATGTTGACTGTGTCGTCTAATCCGCTCTGCTTTG 1171578 37 81.1 0 ..............................TTTTTTG | ========== ====== ====== ====== ===================================== ===================================== ================== 11 37 98.3 36 GTTAATAACCCATGTTACCTCGAGAGGGGACGGAAAC # Left flank : ATTCGTTGTTTTGAAACGGAGAATCATGAGGAATTTTTAAGTGGTTATACGACGGGAGAGTAATGATGGGATTTTTTTACAACTTAGATGAGGAGGCGAAAAACTTTGCGCAGAAAAAAACGGTATTTTGTCTTGTTGTCTATGATATCATCAGCAATAAGCGGCGCCTCAAACTTTCTAAATTGTTGGAAGGATATGGTAGGAGAGTCCAACGTTCTTGTTTTGAAATTGATGTTGAAAAAACAAATTATAATCACCTTCTTCAAGATTTAGAAAAATTTTATTGTCAGGAGGAGGGAGACAATATAATTGTTTATGTTGGTGATAAGAAAGAAACAGTCATCTTCAACTCTTATGAAGGAGCAGAAATTCTGGAAGACATTTTGTTTTTCTGAAACTTTTAATTTAATGAAAAATATGGTAAAATATAGATATGTTTCCAAATCTTGAATAAAACAAGATTTAGGGGTCATTCTCTGAAGCTTGATACAAGATATGGG # Right flank : CATGAAATTCGCACAGATACTTGACGACGCTTTCATATTATGCTAATATATTGATTGTAAAGAATAGTTCTGATAAACAGAGAGGGCGCCCTTAACTGGTGAAAAATACTTTCACTTTTTGGGGTGCTTTTTTTAGTAAGGAAGGTTAGAAATGTGAAGAAAGTACAATTGTATTTATCAAACGTTGAAATAAGAGACGATGCTCTAGTATCTAAGTTGCAAGGATTTCTAATGAGCCAGATTTCGGAGGATTTTGTGGATTTTCTTCATGAACAAGAGACAAATCCCTACTCTTTAAATCTATTATCCACGAGAGAAGGAACGATATGGACGGTCAATCTACTTACCCAAGAAGCAGAAGAGAAGATATTGCCTCAGCTTCTGGATTTAGAAGAGATTCAGTTAGATACTTACTCAGGAGCCATATCTGTAAAGAGAATAGAGATTCAGACTTTATCACAAGAGACCTTATTGGAAATTTTTCGGGAGGATGATCCTAG # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAATAACCCATGTTACCTCGAGAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //