Array 1 287537-287892 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACBCR010000003.1 Clostridium botulinum strain CC4A-KM61-1 3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 287537 29 100.0 37 ............................. CTAAGAGGTGATAACGGCGAGGGTGGGGAACTCTATT 287603 29 100.0 37 ............................. CTACACTCTAGCCGTTAGGTCATCACCTGTTAAATCT 287669 29 100.0 37 ............................. CGTTAACTTCTGAGTATTATTATCTTGCAATGTATCT 287735 29 100.0 36 ............................. CTTGTTTATTAGATGTATGTATTATGTGATATACTA 287800 29 100.0 35 ............................. TCTAATATATGGATTACAATAACAACAGTGTTTAC 287864 29 82.8 0 AT.............T.A.......G... | ========== ====== ====== ====== ============================= ===================================== ================== 6 29 97.1 37 GCTGAACATTAACATGAGATGTATTTAAA # Left flank : GGAATGGCTATTTTACTATGGTTGAACATTAACATGAGATGTATTTAAATAGATTAAATGTCTCTTCTGATTGTAAGGCATGTATAGTTGAACATTAACATGAGATGTATTTAAATGCAACTACAATAGCAAGTGTAGCTACAGGTATGGCGATTGAACAGTAACATAGGATGTATTTAAATTTGTATTGTTTACATACTTTATTTAATATTGCTTTAGTTGAACAATAACATGAGATGTATTTAAGCAGAGAACGCAAATCTGTGATTTGGAGTGAGTCGTTTACTCTTTAGAGAATAAGAGAAGGAGTTTTATAAATTGAATCTTTCCAGGCGTAACAAATTTTAAAACCTATTCTAATCATTGATATATAAGGCTTAGGATAGGTGTTATTTTATATTTATTAAAAAACGTAATCACTTGGAAAATTTTCTATAAAACCTTGTAAAATCAATGGTTGTATGATATTCTTAAAAATAAGGAATGGCTATTTTACTATG # Right flank : AAAAACAAATAACGATGAAAGGATAACAAATAATAATTAAGGTAGCTTTTCATTGACAAGGTTTTTCAACATTTTGAAATTGAAAAATCAATAGCAAATATTATACAGAGAGGGAATCAATTGTAAGCAGTAAAGTCTAATTTTATAGTTAGTTTTTTATAGAATTAGATAGTTAAAAAATTAAACATATAAATATGTGTTTATTTTTTATATAAATTTGATATAATATAAATAAGAAAAGCTTAGTGTTGGAGCACTAAGCAATCCTTAGAATATTTATTTTGTTTTAGGGCTATTGGATGAATTTAATAATTAAATTTGAGAGATTGAAGCACTATTCTTGGTCGGATGGGTGCTTTTTCTCTTTGCCATTAAGTTCTATGTGAATACCAAGAAATTTAATCTTGATAACTAGTTTGGAAATAAAAAGATTATGTTTTAAAATTAATTTAACAATATAAATTACAACAAAACTTTTTATGGTTAATTCTAGCATATCC # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTGAACATTAACATGAGATGTATTTAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.41%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 2 288798-289020 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACBCR010000003.1 Clostridium botulinum strain CC4A-KM61-1 3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =================================== ================== 288798 30 100.0 35 .............................. TTTTGTTAGTTATTATGTCGTGTATTTTTTCTAAA 288863 30 100.0 34 .............................. TCCATAAAGTTTTCTCCTTTAAAAATGTTATTGT 288927 30 100.0 34 .............................. ATTATGATGGTGAGATAGTTTATGATAGCGATAA 288991 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== =================================== ================== 4 30 100.0 35 GTTGAACATTAACATGAGATGTATTTAAAT # Left flank : GATAACTAGTTTGGAAATAAAAAGATTATGTTTTAAAATTAATTTAACAATATAAATTACAACAAAACTTTTTATGGTTAATTCTAGCATATCCAATACCACCCCCTATTTATAAGTGAAAGACTCACCAATATCCTAGGAGGATAAAATATTCAAAACCCCCGTAGCCATCCACTACGGAATTACTATCCTAACTTGGATATTATATCATAATTATCTATACTAAAAACAGAAGGATTAAATGGTAAATCACATTTCCATTTAGAATATTACGTTTATTTTAGGATAAAAATAACAAATAATTATATAGAATACGCTAATATTTTTCCAGCCAATTTTAACTTATAAGCCTATCTTAGCTTTTGAAATGTAAGGCTTAAGGTAGGTTTCCCTTATATATTTATAAAATATCATAATCGGTTGGAAAATTTTCTTTAAAACCTTGTAAAATCAATGGCTATATGCTATTCTTAAAAATAAGTAATGGCTATTTTACTATG # Right flank : TGTATTTAATACATTTTCTAAAGTATTAGCCATATGTTGAATAATAAGAATCATTAAAAGTCTTAGAAAAATCTAAGGCTTTTATTTTATGCAAAGATTTAGAATAGAATATGATAGGTAAGTAACTTATCATTAATAAAGATAATAATATTTTTAAAATAAAAGTAGAATAATCGGTTATATTAACTAAAGGCTATATGGTATAATATAGATAAATTTGTATAAAGAGGTGCATAAATGGAATTTTGTGAACTGATTGCAACAGTGATGTTAAAAAAAGATATATATTTTGAAGATTGTGGATATATAATAGGGAAAAACATAAATAAAAGTATGCTTTTGGATAAAGATTTAAAGGAAATACATCCAAAGAAACAGTACAAAAATTACGTATTTAATAGTTTTTATCCTATAGAAAGAGACAAATTTTATAAAAAGGATAGATTATATATTTTTAATATTAGGGGATTGAGTAAAGAATTTATAGATAAAATAGAAAC # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [73.3-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA //