Array 1 2304701-2306526 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP023367.1 Anaerocolumna cellulosilytica strain SN021 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 2304701 32 100.0 34 ................................ GCAGACGCAAATGGATTCCGGTAATGTTTTTTTT 2304767 32 100.0 35 ................................ AATTGGTGATGCCCTTAACAATTGGTTTTCTGGCA 2304834 32 100.0 33 ................................ ATTTGCCAATGGTGCGTTGAAATACGACAGCAA 2304899 32 100.0 34 ................................ TCTAATAAACAAATTTAAATCCGCCAACATAAAT 2304965 32 100.0 36 ................................ AATATTAGGCAAACCACTAAGGATAGAATCAACAAC 2305033 32 100.0 34 ................................ ATCAGTATGCACAAAACTATACATCCCACGATAT 2305099 32 100.0 36 ................................ CCACTGTAGACCAGTCTAATTCACTCACAAATCCAT 2305167 32 100.0 34 ................................ TCTAATAAACAAATTTAAATCCGCCAACATAAAT 2305233 32 100.0 36 ................................ AATATTAGGCAAACCACTAAGGATAGAATCAACAAC 2305301 32 100.0 34 ................................ ATCAGTATGCACAAAACTATACATCCCACGATAT 2305367 32 100.0 35 ................................ AACTAAATCAAATATTGAAACAACAGATACTACTG 2305434 32 100.0 34 ................................ ATGTTATAAAGAGATATAAAAATTACAGTGGAAA 2305500 32 100.0 34 ................................ CGTAAAGTCTATATCCAATCCACCGTTTAACTCT 2305566 32 100.0 34 ................................ TGAAATAAAATAAGCAAGCTATAAGCTTGCAAAA 2305632 32 100.0 34 ................................ TCCATTATCAGGATTAATGTCCAAACAATGCAAG 2305698 32 100.0 36 ................................ CCAATAGTCAGCATTGTAATTTACAGGCAGAGCTGT 2305766 32 100.0 34 ................................ TATTTTGGTATAAATTTCACCGGCTGATTTATTT 2305832 32 100.0 33 ................................ GTCTATTTCAACTTCTATTACTTGATTTTTAGC 2305897 32 100.0 35 ................................ CACTTAGTCCTTCTGAAAAGGTGCAAATTGCATAA 2305964 32 100.0 35 ................................ ATTTAATCCTCCACCGATATTTACTTGCCACCCCG 2306031 32 100.0 33 ................................ CATATGTTAAAACCATACCAGAAGCGGTGCCAA 2306096 32 100.0 35 ................................ TCCAAGAGCTAACCGCAGAAAATGATCGCAGACTT 2306163 32 100.0 35 ................................ GTACTTTTACGATTGATATTAAACCAGGTTATAAA 2306230 32 100.0 36 ................................ TAGATTTTAACAGTATTTCGTTTAAAAAAATAGGCC 2306298 32 100.0 34 ................................ CACAATCTATTGGCAGTTAAACTTGTCAAATAAA 2306364 32 100.0 33 ................................ TATAATGAATATTTGCATGTTATAACCGGCACT 2306429 32 100.0 34 ................................ CTTGCTTGAATACTTAGACTTGTCCCGATAAAAC 2306495 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 28 32 100.0 34 GTCGCTCCTTACATAGGAGCGTGGATTGAAAT # Left flank : TTTCCTGTTGATTGTGAGGAAGCATTAATTTTGTGAGCGAGCTTCTGCAAATTAAAGACTTAGCAATGAGGGGGAATGAACATGGGGTATGATGAATTGATACATCGCAGATATTGAGTAATAAAGTGATTTAACAGGATAAAAAGTACGTATATTAGAAGCGGACGGGGTAGCCCTCCCACAGCTGTAAATTATCTACCACAGCATATTTTATTGAATACCAAAGAAGGTTTTGATACAATAAAGGATTGTAAGATGTTTTAGAAATTCATATGAAGAAAAAGAGAAGGAATGCTTTCAATTCCTTGTTTCGAGTAAATGCAATTAATGGTGCGAATGTGAAGTGAACATGAATTCATTGGGACATTCGCACCTGTATTCTGGTACTATTTATAACTATTATTGAATTTGACTTTATTGCTGTCTGGTGCTATAGTATAAAAATCAGTATATTGCATAAATGTTTTCATTTATAAAGATATTTTCTAAGCATTTTTGCT # Right flank : TTACACAAGGGATAATAAACAAATGTCCTTATTAACAACAATAAGATGTGACAGAGCCAAAGATTATATGAAAACTACTTCGACTTTCAATAATTAGGACCTTCGTTTAAATAATGGAGGTGCTTTTTATTTGTTGTAAAAAATATTTGCGTTAAAAAACATTCAATTCCTTTTATCTCATAATAATTGGGTAGTAATTAAAACAAAAAATAAATGAAATAATTATGGACATGTGTTCATAATTTGTACTATAATATCCATAAATCTACAAATTATTACCATATGTGGAATTGAAAATATCTGATATTATCTTACGTACGTGAAGGAAGGAGAAGGAATGGAGAGTGAAAGAATATATCCGGCACACTTTCGAATAGAGGATGAAACAATACAGTCTGTAGAAGAACATTTACAGGCAGTTAGTAATTTATGCGGAAAATATGCAGCAAAATTACAATTTGCAGAAACAGGAAGATTATTGGGTTTGCTGCATGATATAG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCTTACATAGGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: F [matched GTCGCACCTTATATAGGTGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.30,-3.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [80.0-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.64,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 2315454-2316149 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP023367.1 Anaerocolumna cellulosilytica strain SN021 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 2315454 32 100.0 37 ................................ AAAATATTCACAGCAGTGAATTAACAGGAACACTAAC 2315523 32 100.0 34 ................................ TTTGACTGGGTCTATCCATTTTTTAGGTGCTTTT 2315589 32 100.0 35 ................................ ATCTATCGCACAAAGTACAGTAATATGCTTTAATA 2315656 32 100.0 36 ................................ CCACTGCCTTTTACATCACTGTAGATATAAAGACCC 2315724 32 100.0 33 ................................ CCGTTTACGCAGTTAACTAAATAAACATGAGCA 2315789 32 100.0 33 ................................ GGTCAAGGGTACTGTTGATACTATATCTGTTGC 2315854 32 100.0 34 ................................ AACCGCAATAAGAGAAATAGACTGGCAATTAGTT 2315920 32 100.0 34 ................................ ATGGCAACACCTAGGTTATCCATCATGGTAAAAT 2315986 32 100.0 33 ................................ GCATTTTTAGGGAGGTTAGTCGTGCGGATGAGC 2316051 32 100.0 36 ................................ TTATTTATGCAAGGAGTATAAACTATCCCCTGATAC 2316119 31 81.2 0 T....................AA.-...TC.. | ========== ====== ====== ====== ================================ ===================================== ================== 11 32 98.3 35 GTCGCTCCTTACACAGGAGCGTGGATTGAAAT # Left flank : TGGATAATGCTTGTACTCATTACATATGATGTAAATACGGAAAGTGAAGGCGGGAAAAAGCGCTTACGGAAAGTTGCAAAACAATGTGTTAATTACGGACATCGGGTTCAAAATTCTGTATTTGAATGTATGCTGGATACAACACAATTGAGGCAATTACGTGGAATTTTAGAAGGTATCATTGATGTTGAAAAGGATAGCCTAAGGTACTATTTGCTTGGGAAAAATTATAAAGATAAGGTGATTCATGTTGGAGTGAAAGAAAGTTTGAACTTAGATGCGCCATTAATTCTTTGATGCATAATTCATTCCTACATGTGGAATCAACAAGGTGCGAATGTGAAGTGAACATGAAATCACTGGGAGATTCGCACTGAAAATTAGTGTTGTTTAATACTATTATATGATTTGATATTATGAGTTCCGAATGATATAGTATAGAAATTAGCAACTTGTACAAATATTTATTTCTTATAATAGATTTTTACTACATTTTTGCT # Right flank : TTAGCCTTATTTTGATGATATGGCTACTTCTAAAGGATATCCGTTCCGATGATGTAGGGAAGGAAAATGCAAGAGTATCAAAGTCACTTGGTGAAGCACTGAAGGAAAACGGCATTTCGTATCCAAGCACTTCAAATCTTCTGGCTCTCACAAATCTCTATACGGTATCTTGGCAGAAGAGTTATTGAGGGAAGCTCAAGATTAGAATGTCAGCCATTTACTTTTGGAGCAGCCATGGAATACTGTAGCTCCTTAAAGAAGACCTCTAGGCCGTTTCCATACTCTTTTGTGTCTGCTATATAATTGTGGTAAAAGTCGTGAAGTCACTCCAATAGTCGGTCCACAGAAAACTTGTCTTGTCCTCTTCGCGGAATTGAGTGTATGCAGGTGAAAGAAAACCCAATATTCCAATACATTAATTTGCTTTGCTACACGTATTTGTGTATAGTGGTAAAACATTTAAGCGAAGGGGCAGGTTTGTAAATCAATGGGTGTAAATT # Questionable array : NO Score: 9.17 # Score Detail : 1:0, 2:3, 3:3, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCTTACACAGGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [8,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.50,-5.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.68,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 3513282-3505567 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP023367.1 Anaerocolumna cellulosilytica strain SN021 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 3513281 30 100.0 35 .............................. GAAGAATCTGTGAGGGAATATATAGCAGAGGAAAA 3513216 30 100.0 35 .............................. TTTACTGTTGTAGCGCCTGCTGAGTTATTAGCAGA 3513151 30 100.0 36 .............................. AAGTTTGTATCTGATGGTATATCCGTTTCTAAATTG 3513085 30 100.0 36 .............................. TCCCTTAAAATGATTTTTGGAAAGAAAGAAAAAATA 3513019 30 100.0 35 .............................. AGTCTAGATTGGACAACCACCTGACAATTTAATTT 3512954 30 100.0 36 .............................. TTTGCACAACCGCTACTCAATACCGGCTTCGATTGC 3512888 30 100.0 35 .............................. TCCAATAATCCATATAATCTGAAACCGATATTTGG 3512823 30 100.0 36 .............................. TACACAAGCAGATTGTTTCTTCCCCACAGCCTATAA 3512757 30 100.0 35 .............................. GTAAATGGACAACTGATTTTGAATCTATGGCCAAG 3512692 30 100.0 36 .............................. GGTTCTCGGTAAATCTGACTGCGGTTTTTTCAATTG 3512626 30 100.0 37 .............................. AAGGCAGGAAAGATGTGGTTTGAGCGAATGAAATCAG 3512559 30 100.0 36 .............................. GTGAAAAAATGACACTTGCCGAGGCTATGAGGTACA 3512493 30 100.0 33 .............................. TGATGTTTCTAGATATAAATTCATGTTAGACGC 3512430 30 100.0 36 .............................. ACTTATAGGATTAAGGGAGCACAGATTGATGTTTCA 3512364 30 100.0 35 .............................. TTAAAAAATCACCTCACTTATTAAATGTCCGTTGT 3512299 30 100.0 37 .............................. AATAAATTTATGTCTAATGCATGGTCTGGTACAAAAC 3512232 30 100.0 35 .............................. TCACAAGACCGGCAGCATTACACCGACTAGCTAGA 3512167 30 100.0 35 .............................. TTAGACAAAACAGAAGATGAGTTTTACAAACAGAA 3512102 30 100.0 36 .............................. TCTTGACCTACTTTATATCTATTAAGCTTGGCTAAT 3512036 30 100.0 34 .............................. GATGTTAAGCCCTACACCTAAAACTGCCATTACA 3511972 30 100.0 35 .............................. TCTTACTGTTACATATTGTTCACCTTCTTTTATTA 3511907 30 100.0 34 .............................. CGATAAGAATGAGGTCTAAAATTATTGCCATAAG 3511843 30 100.0 36 .............................. GTTCCTGGCTATACGACTTATACAGCGGACAAGTGG 3511777 30 100.0 37 .............................. AACAAATTTTATGCACGGATAGCAATTGTTGGATTAC 3511710 30 100.0 36 .............................. AGAAAAGCGAGTGGGACACCTACATGGAAAAGCTTC 3511644 30 100.0 36 .............................. ATTTACTATACTCATAATATGAGGGTAATGCCTACT 3511578 30 100.0 35 .............................. GGGCATAGATGGAGACTATCGCCCGAACTTGCTAA 3511513 30 100.0 36 .............................. CGCTTAAACTTTAGATAATGTCTCACTGCACTATCA 3511447 30 100.0 35 .............................. ATTCTAGTTTTGATATCCGGTAATCGAGGTCGATA 3511382 30 100.0 36 .............................. TTAAAAATCAGTTTATCATTCTTACATTTGATTTTT 3511316 30 100.0 35 .............................. CAACTATGATGATAGAGGAACACATCTTCTCCAAT 3511251 30 100.0 35 .............................. TAACATTAATACCCTCTGGAACGTTTTCTATACTC 3511186 30 100.0 36 .............................. TTGATTAGCAAGTTCGGGCGATAGTCTCCATCTATG 3511120 30 100.0 36 .............................. CGATTAAAAACATGTTCGATAGAAAGGAAACAGATG 3511054 30 100.0 36 .............................. ATGTAAGCGTTTAAGTCTTTAGGTTCTGAAAAGCTA 3510988 30 100.0 36 .............................. TGTCAAAACCTCTTTTCTTTATTTATTTTCTTTTAT 3510922 30 100.0 36 .............................. TCTTTGACCATTTCAACATCGGCAATATATATTCCA 3510856 30 100.0 37 .............................. AAAGCCTCATAACTTAAATTAGAACTTGATTGGCCTG 3510789 30 100.0 37 .............................. ATGGTTTGGATTGCGCAGAAATCGTTTTGAAATTGAA 3510722 30 100.0 36 .............................. TCCTCAGTTTGAGGCACTTTATTAACACTTGTAAGC 3510656 30 100.0 36 .............................. TACCAGGAGGATATGCCTTTCAGCGAAGGTGGTGGA 3510590 30 100.0 35 .............................. CCTTTCCCTATAATTTCGTAAATATCACCGAAACA 3510525 30 100.0 36 .............................. CATCAAATAAGGCTAAGTCACCTGCAACACAGGAAA 3510459 30 100.0 35 .............................. TGTATCGCTACAAAAAAGGGCGTATTCATTAGGAT 3510394 30 100.0 36 .............................. TGTGATTTCCTCTCTTTATTTACATTATTTGTTGCT 3510328 30 100.0 36 .............................. TCGCAAACAAAGCAGTATCAAATCTATACGGATACT 3510262 30 100.0 36 .............................. TCTGGATAAGTTGTGCTTGTAGTTGTTTGCAGTATT 3510196 30 100.0 36 .............................. CTGTTGAAAAAGGTTGAGCCATTTTGAGCTTTTAAC 3510130 30 100.0 36 .............................. CACAAGTGCCTGAACAGTAAGAGCAAGTGCGACCTT 3510064 30 100.0 36 .............................. CAGCAACATCATGCGCGGAACGGTCATTAGCCATAG 3509998 30 100.0 36 .............................. ATAATATTTGACAAATTACAATATTATGTGCTAAAA 3509932 30 100.0 36 .............................. CGATAAGAATGAGGTCTAAAATTATTGCCATAAGCG 3509866 30 100.0 36 .............................. GTGTATACAAGGAAAGCTTATAGTTACTGGGGTTTC 3509800 30 100.0 37 .............................. ACAAGAATTACTGTCAAAAAGCTAGTGCTGCACTCCT 3509733 30 100.0 36 .............................. CTATCAAGAGTGTCTCAAGTTCAAATGGGGAGAAAG 3509667 30 100.0 35 .............................. AATAAATATAGCATAGGAGGACAAGCAATGATAGT 3509602 30 100.0 35 .............................. TATCAATAGACAGCTGGTCAACTGATTTTTGTATC 3509537 30 100.0 35 .............................. CGATAAGAATGAGGTCTAAAATTATTGCCATAAGA 3509472 30 100.0 35 .............................. GATATCAAGTAATCACTTATTTTCCTATCTATATA 3509407 30 100.0 35 .............................. AAATTCAAGCCGTGAAAGCAAAATAAGGAAGTTTG 3509342 30 100.0 35 .............................. GCTAAGAACGGCGGTCAAGATACTTTATACGGCAG 3509277 30 100.0 36 .............................. CTCGAATATGCTTACAGAACTTAATATCAAGGATGA 3509211 30 100.0 34 .............................. ACTATTGCTTCGGCTTCGTTTCTAGCCTGTTCCG 3509147 30 100.0 35 .............................. ATATTTGGGATGGCTCAAAATTAAGTCCTGAATTA 3509082 30 100.0 36 .............................. CTTAACTGGATTACCTTAAACTTATTATCCCTTGTT 3509016 30 100.0 36 .............................. GTCAATTACAAAGCAATTTTATCATAAAGATATCGG 3508950 30 100.0 35 .............................. AAATGCGAATATGGCTATGAATCAGAACAAGTTTT 3508885 30 100.0 36 .............................. GGCAAAATCCAATGGATTAACAGTCGCAAAAATCTT 3508819 30 100.0 35 .............................. AGGTATGCATTGAGTAAGACATATATGTTCAATGG 3508754 30 100.0 35 .............................. CAAGTTGTATCTTATGGCAATAATTTTAGACCTCA 3508689 30 100.0 36 .............................. ATGTTTAGGCACATCTAAGTATGTGCTGTGTACCAC 3508623 30 100.0 34 .............................. GCTGAAAATGGTGGTCTAAATGCTGTAAGGCGAG 3508559 30 100.0 36 .............................. CAAAGAAAATACTTATTACATCATAAACACCGATGA 3508493 30 100.0 36 .............................. GACAAGAATAACCACAACATAGATGCAATAAGATAC 3508427 30 100.0 35 .............................. ACCAGAACCGGTAAATCTACATTGTGCATTTTCTT 3508362 30 100.0 36 .............................. TGGTCCCGAATGGTATCATGCTAAGTTTACAGGGAT 3508296 30 100.0 36 .............................. AAAATACCACATATTGGTATTATGTGATACTGTTTA 3508230 30 100.0 36 .............................. TTCTATTGATGATATTGATTATATTTTTACAGAGTC 3508164 30 100.0 36 .............................. ATCGAAACAAGTTCAAGCTATTTCCGTATGGATGCA 3508098 30 100.0 36 .............................. ATTGAATACATAACAGATGTATTAGTTAAATCATTA 3508032 30 100.0 35 .............................. AGGGCTAGAGACCCTAACAGAGATAAAGCATATGA 3507967 30 100.0 37 .............................. GTCCTTCCTGCTAAGGATTGTCTGTAAATCGGTTATA 3507900 30 100.0 36 .............................. TGAAACAGGACGAGCAGAAGAAGTTTTTGATTGAAA 3507834 30 100.0 36 .............................. TTCAGAGGCGTATAAACAGGGCATAGCAAGCAACCA 3507768 30 100.0 36 .............................. TTTGCTGAATTGGATAAAGATTACTCGCCATTGAAG 3507702 30 100.0 34 .............................. GAAGATATACCGTTTTGGGAGGAGGAAACGCATG 3507638 30 100.0 36 .............................. ATTGTAGACTGGGGCGAAGCTTGGGAAACGGTTTTA 3507572 30 100.0 36 .............................. TTGTTTGGTGATAAGAGAAGTAAAACACATTGGTTA 3507506 30 100.0 36 .............................. TTGAATAATTCAGGTGACCTAGTAGGTGCCGCTCTG 3507440 30 100.0 35 .............................. ACCCCTCCACCGTTGTGATATCCACTTTGTATAGT 3507375 30 100.0 36 .............................. AAAAATACATAACAGACAACCCTTGTTATAAGCAGG 3507309 30 100.0 36 .............................. ACTACTGGAAGTTCTTATGCTAAAAAAGGTGAGAAA 3507243 30 100.0 36 .............................. ATGTATTCCCTCTTTTCTCCCAGCTCAACCTATAGA 3507177 30 100.0 36 .............................. CAAGCAGTTGCCCGTTCTGTTCTATGATTAAGCATT 3507111 30 100.0 35 .............................. ATGGTTAGTTTTGATAACGTGCAAATTCTTTCCAG 3507046 30 96.7 36 ...................A.......... ACCTTTACCGGTGAAGCGGCAGACGCTTTTCTTGAA 3506980 30 100.0 36 .............................. AAATAAAAAAGTGTTATGAGTGCGAATACTCCAACA 3506914 30 100.0 37 .............................. TCTTTTGATTGAGATAATCGTTAATGTAGTTATGCAA 3506847 30 100.0 36 .............................. ATATTGACAACCCGCTATATCAACACATGAAAAAAG 3506781 30 100.0 36 .............................. GAACAAGTAAAGTGCAAATATTTAGAGCGCGTAGCC 3506715 30 100.0 37 .............................. CTTATTATGCTGACGGCTGGAACGGTAATCAACATAG 3506648 30 100.0 34 .............................. CCATTTCCGCAAAGTGTGACTGCCTTTCCATCGG 3506584 30 100.0 35 .............................. TCCCTAACAAGGGTAATATGTAATACTGTTTCACC 3506519 30 100.0 37 .............................. CTTATAAAATCCTCTATCCGGAACAACAGTTTTCTGG 3506452 30 100.0 36 .............................. TCGTCTAGGGTGATAATTAATTGTTGCGAGATTGGG 3506386 30 100.0 36 .............................. GTAGCCGTTACAAGCAAGTCAACAACCGTAGTTTCC 3506320 30 100.0 36 .............................. CGAAACACAATAATTCTTCATATCTGATACCAAGCT 3506254 30 100.0 36 .............................. TAAGGAGGTCTATAAGTATCAACCGTAGATGTAATA 3506188 30 100.0 36 .............................. CTGTTAAAAAAGGTAGAGCCATTCTGTGCCTTAAGC 3506122 30 100.0 36 .............................. ATCTATATTAGCAACCATATCTCCTATAGTGTTACC 3506056 30 100.0 35 .............................. TACTAAAAAAGCCCTCTCCAATCCCCTGAAAAAGA 3505991 30 100.0 36 .............................. AATATAACAGAATCTGTTAAGGCACCGTTTAGCATA 3505925 30 100.0 35 .............................. CTACTACTGGGAATTTTGAACCACGAATTACCGAT 3505860 30 100.0 36 .............................. GAGCCAATAGTATTTTTTTGCCTCTGCCAACTTATC 3505794 30 100.0 35 .............................. CCAAATACGTTCACTTGATGTTACTGAACCGTTCA 3505729 30 100.0 36 .............................. CGAAGTAAAACGGATAGCAAAAGCAGGGGACAGTAT 3505663 30 100.0 36 .............................. ATATGCAATTATCGTAAATAATCAAACAAGTGATAA 3505597 30 90.0 0 .........C..........T...A..... | A [3505574] ========== ====== ====== ====== ============================== ===================================== ================== 118 30 99.9 36 GTTTTAATATAAACAGAATGGAATGTAAAT # Left flank : AAATTTGGTGGTGATATGTATGTGGTTCTTATATATGATATAGAAGTTGATGATAATGGTGCCAAAGCTTCACGTAACATATTTAAAATCTGTAAAAAGTATCTTACCCATGTCCAAAAATCTGTATTTGAAGGTGATATTACGCCAGCTCTATTACAGCAGTTGAAGTTAGAGTTAAATAAGCATATACGAGAAAACAGAGATTCAGTAATTATTTTTAAAAGTAGAGAAGAGAGATGGATGCAAAAAGAGTTCTGGGGGAAAGAGGATGATAAGACATCTAATTTCTTCTAAGCTGAATGGTAGTAGAGGTAAATTTATTAATTGTCGACCTGTCAAATTGCTTAAATCTAGGAGGCTCGACAGCTATAAGAAATGCTGTTATAATGTTATTTAGAAGTTATAGAAGATTGTATCGCTTAAATATCTGGATAAATTATTTAGAGGTAGACAGAAAATGTATGTATAAACCTCTTATAATGCCTATTTGAGTAATAAGG # Right flank : TTTCTATGCTGAGAATTATAAAGTATTACCCCCCGTGTAAGGGGGCATGGTTGTTTCTTTATATGTGTTTCTTATTCTTTTAGTTTATCTATAAAATCCGATATCACTGTGCGATTTTCTTTAGATAGACTCCAATAAGCGTTTAAAAATTGCTTAACAAATTTGTCATTACTTTTAACAATTTCATTTATAACTATGGATAATTCGTTATCAATTTCCAAGTGTTTCGTATACATTTCACCGTTACCAGTACGAAGCCAATCCTCATTTATTTGAAAGGTCGAACATATCATTTTAATATTTTGATCAGTTAGGGTATTTTTGCCTGTTTCAATCGAACTAATGGAGTTAGGTTTAAGTCCCAGCCTATCTCCAAATTTTTTTTGCGATAGGTTAAGGGATTTTCTAATTAACTTCACACGTTTTTCCATGTATAACACCTCCTTAGATAAAATTATCACTAAATGATATATTTGTCAATTAATGAAAGAATATATCTT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAATATAAACAGAATGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA //