Array 1 247694-245446 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADZHT010000040.1 Shewanella algae strain CCUG-20533 20533_40, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 247693 28 100.0 32 ............................ TACACGTTCCCGAACGGTGATTTTCAATGTTC 247633 28 100.0 32 ............................ ACCCAGAAGACCCGACTCGCAACGTGGTTACG 247573 28 100.0 32 ............................ ATTTTTTCAAATCGAGACTTGGCCAGCTCCAT 247513 28 100.0 32 ............................ GCCAATAGTGCCGCCGTCGTATAAGTAAATGT 247453 28 100.0 32 ............................ AGCAGGATGCAGTTGACATCACTATTGACTAC 247393 28 100.0 32 ............................ ATCTCAACCAGGCATGAGTAAATCATCTCGTC 247333 28 100.0 32 ............................ GCCAAGCCGATGCAATATCAAAGTCAGACCTT 247273 28 100.0 32 ............................ TGCTCGAATGCTTCGCCACAAGGCATACATTC 247213 28 100.0 32 ............................ ACCCAGCGCCTTAACCGCTTCTAAAATCTTAT 247153 28 100.0 32 ............................ TGCAGTACCAGGCTGAGCTTACCTAGCTATAC 247093 28 100.0 32 ............................ TGAACGTCACGGTAAGGTTTATGTCTCTGATA 247033 28 100.0 32 ............................ GTCTAGATGAAGATGTGTCGCTCTGCCCTGCC 246973 28 100.0 32 ............................ TGGCGCGTATCGTATGCGTTGTAAAGCTCGCG 246913 28 100.0 32 ............................ AGCCGGATTCTCCAATCATTGATGCCGCTGTT 246853 28 100.0 32 ............................ AGACATGAAGAAGGGGACGCGCTTTTCGTCCC 246793 28 100.0 32 ............................ TCAGTGATTGACTCAATGTTCATCACATCACC 246733 28 100.0 32 ............................ ACGGCCTGTCCTGATGGCTGATAGCGCACCTC 246673 28 100.0 32 ............................ ATCATCTGCGAACCATCCCAGAAGCTGTTGCC 246613 28 100.0 32 ............................ ACTTGCTGCCAACGGCAATTGATAAATTTGCC 246553 28 100.0 32 ............................ ATTTGAATAGCGGACTTCATCAGACTGAACAT 246493 28 100.0 32 ............................ GGTCCATCGTTTCATCACCGTCCAGCAGCGCC 246433 28 100.0 32 ............................ GTCTGGACTGGGCTTTGCCAACTTCGGCACGG 246373 28 100.0 32 ............................ ACTCCGTAACGTGTCGACGGATAAACTCAAGC 246313 28 100.0 32 ............................ ACTCCGTAACGTGTCGACGGATAAACTCAAGC 246253 28 100.0 32 ............................ GTCATCACTTCACCCCGCTCGGTTCGTACGAC 246193 28 100.0 32 ............................ TCTACACCACCGGCCTTGTATTCACAGGGTAC 246133 28 100.0 32 ............................ GATATATCCCTGGACCGTATGCTGTCACCTTC 246073 28 100.0 32 ............................ TGACTCACCGTCCTGGCGAGCACGGTTCAGTT 246013 28 100.0 32 ............................ ATCAGGGAAGTCACTCTCACAGCAGCCAACCT 245953 28 100.0 32 ............................ TATTCAGATGAAAAATGCCTGAATAGTCATCA 245893 28 100.0 32 ............................ GTATAGTGCCTCGCAACTAACAATGCCGATAA 245833 28 100.0 32 ............................ ACAGAACAAATGAATGAGTTCGACCTCTAAAT 245773 28 100.0 32 ............................ TCAATCTCTGACCACGGGGCTATAGTCTCATA 245713 28 100.0 32 ............................ TGCCATCAGGCAAAGCCGAGTCACGCAATATC 245653 28 100.0 32 ............................ TACAACAACACCGCCCTGCTTGTTAACCCATT 245593 28 100.0 32 ............................ TCGGATAGCCACCAAGACAAGCTAAACGGAGA 245533 28 100.0 32 ............................ ACTTACAGCTTTCGTACCAGACCGATGATGAT 245473 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 38 28 100.0 32 GTTCACTGCCGCCCAGGCAGCTTAGAAA # Left flank : CGAGTGATGTTTCCTACGTGAGCTTTGTACGCAAACAGGTGAAATCGCCTGAGCGGATTGAGCGGGCTATGCAGCAAAAGGCGGCATTATGGGCGGCAAAGTCGGGCAAGCCGCTGGCCGAGTGCTTAACCGATCTTGAAAAAAGCAAACCGACAGGGCAGTGTGATTTGCCATTTATCTTCTTGCACAGCCAGCAAACGAAACAACGTTCGCCGGACAAAAACAGCAAGTTCCCGCTGTTTATCGAAAGATATCCGCAAAGTACACCTGTGGATGGGCAGTTCGATTGCTACGGGCTGAGTCGTAAAGTTAATGGTATTGCATCGCTTGGAACAGTACCGCACTTTTAAGTATCAAAGGGTGAGTTTTACCCTTTATTTTTGCTCTTTAAAAATAAGCTTTATATACAATCAGTTACAACAGGTGGTGTTCAACAGGGTAAAAATAGGTTTTTTATCCTAACCACCTGTTGTGACATTCTTTTATTGCTTTATTCTATT # Right flank : GTTCTTCTGGTGATGACCTTTCCCCCGAATTTATCACTCGGCCCCAGCAATATCCGAATTTCCTGCATTTATGGGGCTGAAGAGGCCGAAACTGAGGTGATCTAAATAGCGGCCCGGCTCAAGGCTGCATATCTACTCGAAGTAGTCTGCTGGCGCTGCGGCCTTTGTCGTCGCTGACCGATAACTGGAAGCGCCCGGCTCTGGGTGGGCGCCATTCCAGGGTTTGACCCGGCAGGCTCTGGCCGAGCAGGCTGTTACCGGCAAACCAGTAGAGTATTTGGCTATCGGAGGCGGCGTCGGCCTTGAGGGCGATGTGTTCATTGGCCACGCTTTGGCGCAGGCTGTAGGTGACACCCTTCAAGGGGGAGCGGATAAGCGGGGCCGAGTCGCTGACCGCGACTCTTTGGCTGCAGGCGGCCGGAAGCTCCGGCGGCCTCCTGCGGGGTAAACCTGCCTGCTCGAACAGGGCCGCCAAGTCTGATGGCCAGAAGGCAAACACC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCCCAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCCCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [51.7-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //