Array 1 25135-23656 **** Predicted by CRISPRDetect 2.4 *** >NZ_SOYX01000048.1 Campylobacter fetus subsp. fetus strain 13/344 NODE_23_length_25246_cov_18.331422, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 25134 30 100.0 36 .............................. CCGTAAGCTACATTGTAAGCTAAGTCTTCAAAGACT 25068 30 100.0 36 .............................. TATAAAGGGACCTACGAACTAAGCTAGAACCCTTTT 25002 30 100.0 35 .............................. CGGGGAGCAACGTTAGCAATCTCATTTCCGTCCAT 24937 30 100.0 36 .............................. TGGGGATTCGATGAAATTTTTAACTATATAGCATTC 24871 30 100.0 36 .............................. TTTTTATAAGGCTCATTTTTGAAGATATTATGCTGC 24805 30 100.0 37 .............................. TCCAGAGCTAATAAGGGATTTAGAGCAGCTAAAAACT 24738 30 100.0 36 .............................. CGCAAAAAGAGTTGAAATATATAGATAATAGGTTAA 24672 30 100.0 35 .............................. AATCCAACTTAACAAAAATGTTATATAAAATCACC 24607 30 100.0 36 .............................. TAAACTATTTCGTTATCCTGGTTGATACCGCTTAAA 24541 30 100.0 36 .............................. ATGAGTTTAAATTTGATAGATCTGAAAAGATTATTC 24475 30 100.0 36 .............................. CTTGATACTTTTTGCTTGATTAGCTTTGCATTTTTA 24409 30 100.0 36 .............................. TCCCCGTTATCTACCTCTGGCGCCATGCTCTCTCCG 24343 30 100.0 35 .............................. CCTTCTGCGATATATTTGATGAAAAAACAGAAAGG 24278 30 100.0 36 .............................. TTTGAAGTGCACGACGCTATAACTAGAACACGGATC 24212 30 100.0 36 .............................. ATTAAAGCCGAATTACTCCCATTTTTTTTGACTTGG 24146 30 100.0 36 .............................. TGTATGTTGGTAGCTTTTATGGTTACTTTACATAAC 24080 30 100.0 36 .............................. TCACCAAAAAAACCAGGAATTAAATAAAAAGTAAAA 24014 30 100.0 35 .............................. AATCCAACTTAACAAAAATGTTATATAAAATCACC 23949 30 100.0 36 .............................. TAAGCAAGGCTTATAAGCTCTTTACAATGCATTTTT 23883 30 100.0 36 .............................. AGAACTGTTTTAACCTCACTTCCATCAATCTCTTTT 23817 30 96.7 36 .........................T.... CAGTATGCCATTTGATTCTAGTTCGCCTATAGCTCT 23751 30 100.0 36 .............................. CATCCTCCTTTTAATTTATTACATTTAAACAATTTA 23685 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 23 30 99.9 36 GTTTGCTAATGACAATGTTTGTGTTGAAAC # Left flank : ATATTATATATATAACAAATAATCTATTTTTAATAGTTTTAGATAATATCTTTTAATTTATTTTTTATCTTAATTGCTTTTTTAAATTTACTTAGATGATGAGTTTATTAT # Right flank : AAGAGCAAACATGGCAGAGACCTTAAAAGAGAAGTTTAAAGGCGTACTAAGTGCAAATACTAGCTATTTTGAAGGAGTGAGCGACCACATTATAAGTCAGGCTCAAAACATAGCTAGAGTAAATCAGTCTAGTAAATACGGAGTAAAGCATTACAAAGTATTAGCTAGGATAGATAGCCGTACAAGTGATATCTGTAGAAGTATGAACGGACGTATAATCCCAGCCTCGCATATAGAAGCTCAAAGCAACAATATCCAAAACGCTAAAGATATAAACGAGAAAAAAGCAGCTGCTATTTGGAGAAATGAGCCTTTTTTGGGTAAAATACTCCCTAGTAACTTCGGGCTTCCACCATATCATTTTCGTTGTAGAACCGAGCTAGTACCGGTGTGGATAAATGAAGAAGAGATTGATGGAGTAAAGATGAAAAATACAAGCCCGCTTAGCAAAGATGAAGTAGTAAAGCATATAGATAAAACTGGGGTTGAGAGATATGCTA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGCTAATGACAATGTTTGTGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-86.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA //