Array 1 32760-32393 **** Predicted by CRISPRDetect 2.4 *** >NZ_WFKA01000026.1 Azospirillum brasilense strain BR11017 NODE_26_length_63043_cov_19.767468, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 32759 32 100.0 34 ................................ TTCAGTGCGCGGTCCATGCCGGTGCTGGTGCCTC 32693 32 100.0 36 ................................ GACCAGGAGCGAAACCCATCGAGGTCCCAGGCCCAG 32625 32 100.0 35 ................................ TCGACGACCTCGATGGCCGGTTTGAAGCCGTCCTC 32558 32 100.0 35 ................................ TTGTTCCACCATTCCCTGATCCCGGCGATATCATC 32491 32 100.0 35 ................................ CGTCCGCGTCCGCTTGGTCAGAGCGGGCGCGGCGG 32424 32 96.9 0 ....................C........... | ========== ====== ====== ====== ================================ ==================================== ================== 6 32 99.5 35 GTCGCCCTCCGTGCGAGGGCGTGGATTGAAAC # Left flank : TCGTGCGCCAAGGTCCGCTTGCCTCGGCCGGAGCGGCAGTCGAGGCATGGCCTCCTCCCAACGGAATGGACAGCGGTTCGGGCGGTCGTTCGCTCGGCCCGTTAAGGACGTTTGTTCGGGAGAGGGGTGCGGTTGAGTGTCGGAAGAGGATAAGGATCGTCGTAATCGTCAAGGCTGAGGAACGGGTTCCGCTTGCCCCATCTGGGAGCACATGGCGCCCGCCGATGAGCAAACGGTGGGTGGAACACTGATCGGTGTCGAGGCGGCCTGCCGTATCGAGCACAGGGTGTCAAACCGGTGCTGGATTTCGGCGACGCGTTGGTTTTTAAATCGGTGCGAACCGGAAGCGGACATGAAACCCCCGAGGGGTTCGCACATCATTCTCATCAATGATTTGTGCGGTTCCGACATCGAGATGGCCGCTTCTCGATTCGCTCCCGATGGAGGTTCGCGCCCGTTGGGGGATTATGGGTTGTTGAACAAGTGCATAAAGATGAGGA # Right flank : AGATTATTACTATTTCGAATGCTTTGAATCGGGCCATCTTTATCATAGAACCCAAGTCACGCTAGTTCGGATGGACCCTGATTTCTCAGAACATCAACAAAGACTGCCCAAGCGTGACCCGACATAAGCGGCTTCGTCACTGGGAGATGGCCCTGACGGCGAAGTCTTGAAGGAGCAGCACCATGGGGCCGATCCCGCAGCCCCGATCGATTGTCCTGCCCTCGCGCCGGTTCTATTCATAAACGGCGTTTCTGACATCGGTCGGAAACGCCCCAGCCATGCCTTCGAACGCGGTGTTTGTCAGGGCAACCACCGAGAGGCCGTTCTTGCGGTCGATGAACCAGGAATGGCCGTAGGCACCGCCCCATTGCAGCGTGCCAGCGGCCTGCGGTGTGCCCGTCAATGCCGGATCGTCCAGCACCGCCCAGCCATAGCCGAAGCCCCAACCCGGCCCCTGCGTTTGCGCCGTCGCGCCGACCTGATCATGGACCATCAGCCCG # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCTCCGTGCGAGGGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.20,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,5.28 Confidence: HIGH] # Array family : NA // Array 2 41586-42624 **** Predicted by CRISPRDetect 2.4 *** >NZ_WFKA01000026.1 Azospirillum brasilense strain BR11017 NODE_26_length_63043_cov_19.767468, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ============================================ ================== 41586 32 100.0 36 ................................ CGCATGCCGGGCGCCAACGCCACCGCGATCCATGCC 41654 32 100.0 34 ................................ TGCAAACACCGCGTCGCCCTGCTGGACGGTGACG 41720 32 100.0 35 ................................ GTCCTGAACCCCGGAGCCTTCGTCCTGGCCGTCAC 41787 32 100.0 35 ................................ CCCGACGTGAAGGGGATGTGGGTTCTCGACGGCGG 41854 32 100.0 34 ................................ CGCCAGATCGAGACAGCCGTCGGCGGCGCCGCCG 41920 32 100.0 34 ................................ TGCATCCCGGCAGCGGACGTGTTGATTCCGGCGG 41986 32 100.0 34 ................................ GCGGTGTGGGGCCAACGAGCAGCGTGTCTGGGTG 42052 32 100.0 35 ................................ ACGAAGAGGGCCGACTACAACGCTGAGCAAGCCGA 42119 32 100.0 35 ................................ ACGTTGAAGGCGCCGGGGCCGGCACCGACGATGAC 42186 32 100.0 34 ................................ TCCGCAGCGGCGCCGCCGATAATTGGCGCAACAT 42252 32 100.0 33 ................................ TGGTTTTTCGCGGGGTCGAGCCAAGCGCCACCG 42317 32 100.0 36 ................................ CAGGCTGGACATCACCCACGCCCGCATCGTCTGCGT 42385 32 100.0 34 ................................ ATCGGGACCGAGCTGCACCCGACCTACTTCGGGC 42451 32 100.0 44 ................................ GACTCCCTGATCGAAGGGCCGACGATTGGCAGTCAGTACGTTGA 42527 32 100.0 34 ................................ TGGTACGGCGTGGTGGCCGTCTCGGGCTGCGGCT 42593 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ============================================ ================== 16 32 100.0 35 GTCGCCCTCCGTGCGAGGGCGTGGATTGAAAC # Left flank : CTGGATGGCTACCCGCCTTTTCTATGGAAGTGAATCCCCATGCTGATGCTCATCACCTACGATGTGAACACCCAGGATGCACCCGGGCGCCGCCGGCTGCGCCGGGTTGCCAGAGCCTGTCAGGATTTTGGGCAAAGGGTTCAGTTCTCGGTTTTCGAATGCGACGTCGACCCGGCACAATGGGCCGTTCTGCGTGCCCGTTTGATCGGAGAAATCAATCAAGAGACGGATAGTCTCCGCTTCTATCATCTCGGAGCCAACGCGGCCCGCCGCATCGAGCATGTGGGCGCCAAACCGGTGCTGGATCTCGGTGGCGCATTGATCTTTTGATCGGTGCGAACCGGAAGCGGACACGAAACCCCCGAGGGGTTCGCACGTCATTCTCATCAATGACTTGTGCGGCTCCGACACCGGAATGACTGCTTCTGCGGCCGCTTTCGAAGTAGGTTCGCATCCGTCGGGGGATTGTGGGTTCTTGAACAAGTGCATAAAGATGAGGA # Right flank : CCACACGCTCGAGGAAGCCGGGCTGATCGGAACGCGTCGCCCTTCGTGCGAGGGCTGCTTCCTCAAGCCGAATCGCTCCTGTTGTGAAAATCGGTTCATGACGGCTCGGGGAAATTCAGCGTTCCCAGGGCATCGGCAGGTTCAGTCTATCTGTAACTTGATACGGGTGTATTGAGTCATGGTTGGGCTAAACCTGTTGATGTTTTAAATAGGTTAAGGTGGGCCGACTTTTGACGGTCCTGTTTCCATAATAAATCTTAAGACAAATGGACCGTCACTGCTCAATTATTATCACTGCTTCGGGTGAAGGCTCACGATGCGCTGCGGCGGTTTGGTTCTGCCCGGTTTAGGTGTGGGCGGGGCGCCATCCGTCTGCTAAGGAAGAGGGCGCGGCCGCCAGCCGCGGGTGACGAGAATGCGAGGGGCGGGAAGCGCGTGTTCGTTGATAGCTTTATGAATGACCGATGCCTCTCATGCGCTGATGTCCGGTCCGTCCATGG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCTCCGTGCGAGGGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.70,-5.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [51.7-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : NA //