Array 1 863-33 **** Predicted by CRISPRDetect 2.4 *** >NZ_BCTZ01000002.1 Sphingomonas soli NBRC 100801, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================ ================== 862 36 100.0 30 .................................... TTAACGACGACGTTGGAGAGCGTCTTGTGC 796 36 100.0 30 .................................... GTCGACGATGTCGTGCTGATCCATCCCCGG 730 36 100.0 30 .................................... AACGCCGGCGCTGCGACCACTACCAACGTC 664 36 100.0 30 .................................... CACGCGCGGCGCGCATGGGGCGCGAAGTCA 598 36 100.0 30 .................................... AGCAGCAAGATCTGCAGCTGGTGAAGCACC 532 36 100.0 30 .................................... TCGAGCGCGCTCTTCATGTCGTCGGTCGCG 466 36 100.0 30 .................................... GCAGGGCTCGCTTATGGCTACAGGAGCGCC 400 36 100.0 30 .................................... AAGCGCGGGTGAAGGCCGAAAGCGACGCGA 334 36 100.0 30 .................................... CACAGCCGCCGCCAGCGCTTCGCGATGCTT 268 36 100.0 30 .................................... AGGCTGGCTTCGTTGTCGAGGGTGACATCG 202 36 100.0 32 .................................... TCGATCGACGCGATGACCTGTTCTGACGTCGG 134 36 100.0 30 .................................... TGCGGTTGCCGGCTTGCCGGTGCGGACCCA 68 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ================================ ================== 13 36 100.0 30 GGCCTAGCAGTTCAGAAATCGCGGGCCAACAGCAAC # Left flank : CCCAGCTGCGCGTCGATCGACTGCAGGTCC # Right flank : CGAGAAACCCGCTAATACCCGTGGGGTCTAGGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCCTAGCAGTTCAGAAATCGCGGGCCAACAGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,11] Score: 0.37/0.37 # Reference repeat match prediction: R [matched ACGCTAGCAGTTCAGAAATCGCAGGCCAACCGCAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.60,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [21.7-16.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 371338-370310 **** Predicted by CRISPRDetect 2.4 *** >NZ_BCTZ01000001.1 Sphingomonas soli NBRC 100801, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 371337 36 100.0 30 .................................... CGCGCGCAGAAGGAAGGCTGGGAAGCCGCT 371271 36 100.0 30 .................................... CCCAGGGGGTACACGCTCGACGCTTCCGCT 371205 36 100.0 30 .................................... GGGGGGCAGTGATCACCGGAGGGGTGCTGA 371139 36 100.0 30 .................................... TGGGCGGCCAGCGGCTGCTGCGAGGAGCCG 371073 36 100.0 30 .................................... GATTTCCGGCAGCTCACAATGCTCGAGGAT 371007 36 100.0 30 .................................... GCGCGCCGACTTGTCCTTGCTGGTCGGATC 370941 36 100.0 30 .................................... ACATTGCCCTTCGTGGCATTGCCGGTAAGC 370875 36 100.0 30 .................................... GCCGCGAAGCGTGCCCAGAAATCGCCCATG 370809 36 100.0 31 .................................... GAAGGTTGCGCGCTGGTGTTCGTGCTGGAGG 370742 36 100.0 30 .................................... AGTGGTCTCTCCCATGCCGCGCACGCGGGT 370676 36 100.0 31 .................................... TGGCGAGTGCCCTCTTCACATGCGCCAGTGA 370609 36 100.0 30 .................................... TTGGCAAGGCCATTGTCGATCGCCGTTGCG 370543 36 100.0 30 .................................... GGCGCGGCGTTCGGCGTCGTGCTCGCGGGC 370477 36 100.0 30 .................................... GATCCGGCGGAGGCGGGCGCGGGGGCGATG 370411 36 100.0 30 .................................... AAGGCGTCACCGACTTCCTTGCGCCAGATA 370345 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 16 36 100.0 30 GGCCTAGCAGTTCAGAAATCGCGGGCCAACAGCAAC # Left flank : AACAACGGGACGCTCGAGGACCTCGAGGC # Right flank : AGCATCGGCCGTTGTGTCAATTCACTCCCGGCAACCCGATCCCCGACGATGCAACGACATATCCTCCGACCGCGATCACGATGACCGCAAATCCGCGCTCCAGCCGCGCCTTGCGGCCGCCCAGCAGCTTGCCCAGCGCCATGCCGGCGATCGTCCCGCCCACGCCGCCGGCCATCAGCAGCGCGGTCACGCCCCAGTCGACCAGGCCGGACAGCGCGTAGGAGGTGGCCGTCGTCAGCCCCAGCGCGCTGACCACGACGAGCGACGTGCCGATCGCATAGGATAGCGGCATAGCGGTCGCGAGGATCAGGCCGGGGACGATCAGGAAGCCGCCGCCGATCCCGAAGAACCCGGCGGCACCCCCTACGCCCAGCCCGATCGGGACCAGGCGCGGCAGCAGCACCGCAGCGCTGTCCCGCGTCAACTGGACATCGGGGGCCTCCGCCGCACGCCGCCTGCGCAGCATCGAAAGCCCCACTCCGATCATCAGCAGGCCGAAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCCTAGCAGTTCAGAAATCGCGGGCCAACAGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,11] Score: 0.37/0.37 # Reference repeat match prediction: R [matched ACGCTAGCAGTTCAGAAATCGCAGGCCAACCGCAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.60,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [41.7-16.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.87 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 1551-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_BCTZ01000003.1 Sphingomonas soli NBRC 100801, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1550 36 100.0 29 .................................... CAATCATGGATAAAATCAGCCGGATTGAA 1485 36 100.0 30 .................................... AATGCAGGCGCTGCGACCACGACCAACGTC 1419 36 100.0 29 .................................... ATCCCGGAGCGACAGGCCGCGCGCCAGCC 1354 36 100.0 30 .................................... GAGATGATCCGCTTCGTCGCCGGCGTCGGC 1288 36 100.0 30 .................................... TCAAGCTTTCGCTCTCCGTTGTGGATTGAG 1222 36 100.0 30 .................................... GCCCTCTCGATGATCATGACCAACGATGGT 1156 36 100.0 30 .................................... TGGTCGCGGTCGCGGACGAGAGTCAGGGCA 1090 36 100.0 30 .................................... AGGCCCAGCAACAGGAGCGCATGGCGGCCA 1024 36 100.0 30 .................................... ATTCGAAGGCTTGGGGCGAGTTCCGCGTCT 958 36 100.0 29 .................................... AGAACAGGTGACGCGCCTTTGCGCGCGGA 893 36 100.0 29 .................................... CTGGCCGGAGTGCGTTCTCAATCCCGCTA 828 36 100.0 30 .................................... CTTCACGCGCGAGACTTCGCGGTAGATCTT 762 36 100.0 30 .................................... CGGCAATCGAGGAAATGGTGCGGCCCATCG 696 36 100.0 30 .................................... TGCCATCCTGCAAGGCGGTGGCGAATTGAG 630 36 100.0 30 .................................... AGCCTGGGTATCGGCACCAACCGGCTCGGT 564 36 100.0 30 .................................... AAAGACGAGGTGCAGCAGTGAAGCTCCAGG 498 36 100.0 30 .................................... CGGCTGTAAACAAGGCCGTTGGGGGCGTCT 432 36 100.0 30 .................................... TATGTCCGCAAGGTTGGCGCCAAGACACTG 366 36 100.0 30 .................................... ATTCCCATGCGCGGCGCCCAGGGCTTCTGG 300 36 100.0 30 .................................... AGAACGCCGCGCGCGTGCTCGACGAAGTCG 234 36 100.0 30 .................................... TCACGCGCATCGGTCCGCTCGGCCAGGTCG 168 36 100.0 30 .................................... GGGCCGGTGATGCGAATGCGCTTCATGCTA 102 36 100.0 30 .................................... ACTTCGTGAAGACGGCAAGGGCAACTACGA 36 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 24 36 100.0 30 GGCCTAGCAGTTCAGAAATCGCGGGCCAACAGCAAC # Left flank : AGTGCATCCGATTTGGTGCTGTTTATCCCACCGGCGCATGCAGGGTGGATGAAACTGACCCGCCCGCTGGATCCTTTCGCGGCCGAATGAGCGATGGAACGCATCTCAGCGGCTATAGATTAATGTGGATTTTCGTGATGTTCGACCTGCCCGTTACGACCAAGGAGCAGGCGCGCGAAGCCACCAAATTCCGCGAGTTCCTCCTCGATCAGGGATTCGAGATGAGCCAGTTTTCAGTATATGCTCGGTTCTGCAATGGCCGGGAGAGTTACGATTCGCATCTCAGACGAATCGAACGAAACCTGCCGGAGAAGGGCGATATCCATGTCCTCACCTTTACGGACAAGCAGTATGAAAATATCGTCCGCTTCTCTAGCCAACGCCGCAAACGGCCGCGCAATAATCCTGATCAACTGGCGCTATTCTGATCCGACAGCCGGTTTTTGCCGGGCCGGATGTGAGACTTTCCTGATGGCATACAACAGGTTGGCGGCACATCC # Right flank : C # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCCTAGCAGTTCAGAAATCGCGGGCCAACAGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,11] Score: 0.37/0.37 # Reference repeat match prediction: R [matched ACGCTAGCAGTTCAGAAATCGCAGGCCAACCGCAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.60,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //