Array 1 1089498-1099250 **** Predicted by CRISPRDetect 2.4 *** >NZ_UFRL01000002.1 Acinetobacter junii strain NCTC12153, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 1089498 30 93.3 30 ............................AG TCAAACCAATCAGATACTTTTTGCCAAAAT 1089558 30 93.3 30 ............................AA GTGGGAAACCATCTGCGTTGTATGTAGCAA 1089618 30 96.7 30 .............................G TAGATTGAAGAATTGTATTGTCGTAATTGG 1089678 30 96.7 30 ............................A. TAAAAGAACCGCTTACATAGCCTGAGCCGC 1089738 30 96.7 30 ............................A. AATGAATCGCTAAGAGACTCTAAGCCAATT 1089798 30 100.0 30 .............................. GCGACCCCTGCGCACAGCTTCGGGGACTCG 1089858 30 96.7 30 .............................G ATCCAGATACACCTGACGACCCTAATAACT 1089918 30 93.3 30 ............................AC AACCAAAAACAACATAAGTCTATATATATC 1089978 30 100.0 30 .............................. GAGGTGTTGTTCTCCAGTCGCAGTCTGGAG 1090038 30 100.0 30 .............................. GAGGTGTTGTTCTCCAGTCGCAGTCTGGAG 1090098 30 100.0 30 .............................. GCCAAGAATCCAAACGGCAAAGTTATTCCA 1090158 30 96.7 30 .............................A AAAGCGACTAAAAAAAGATCAAAATCTTAT 1090218 30 96.7 30 ............................G. TTTCTAATGCCGTCCTACGTCTTGAGGCAC 1090278 30 100.0 30 .............................. GATCTCAACGTATGGCGTGGCGTTCATTGT 1090338 30 96.7 30 .............................G CTTTCGGCTTTGGAATCTTGACGGGTAAGG 1090398 30 93.3 30 ............................AC GTATATTTTCCGCTTGCCACACCAGAACAT 1090458 30 96.7 30 .............................G ACTCCAAAAAGTTTTTTGCAATTTGCTCTG 1090518 30 96.7 30 ............................G. TGAACTCTACAACATCAAACGCTTTTTAAT 1090578 30 93.3 30 ............................AC GCACAGAAGGGATCAGAATGTCCCATGAGG 1090638 30 93.3 30 ............................CG AGTAAAAAGAGTTAAAGGAGATAGTAGTGC 1090698 30 100.0 30 .............................. CGTTAAACTGACTAGGTTTTGCTTTTTCGA 1090758 30 96.7 30 .............................G ATACCATATCAATTCTCCAGGCAGTATTTG 1090818 30 93.3 30 ............................AC TCTTGAATCAGGTATCAAAATAGAAATTTC 1090878 30 93.3 30 ............................AA TGGGTCGCAACCAATACAAACGTTGTGAAT 1090938 30 96.7 30 ............................A. CGGCTTTTGAGTAGACTTTCATAAAAAAAC 1090998 30 93.3 30 ............................AG TGAGATAGAGATGTTATCCAGACTGATGTA 1091058 30 100.0 30 .............................. TAACTTTGCTAGTTCCGCTTGGGGTTATAA 1091118 30 93.3 30 ............................AA GAATAGCCATTCTTCCCGCAGTTTCGCTCT 1091178 30 96.7 30 .............................A AGCAGCAAAGGTTTGTCGAAGAATATCTGA 1091238 30 100.0 30 .............................. GTACAAGGCAAATGCTAAATTCATGCTATA 1091298 30 96.7 31 .............................A ACTGCCAGGATGAACCCCCTACTCACTGGAT 1091359 30 96.7 30 ............................A. TTTGAATTGATCATCGCTCAACCCAAACAG 1091419 30 96.7 30 ............................A. TGAAGTTATTCAGCCAAATAACAAGCTCTA 1091479 30 93.3 30 ............................GC CCAAAATACCTTTGAACGAAGTTTCTCTTG 1091539 30 93.3 30 ............................AA TTAAAGCAAGGTTAGAGCTTGAATTGATGT 1091599 30 93.3 30 ............................GC TCCTTGAAGAATCTATTTTTAGGATTGAAA 1091659 30 100.0 30 .............................. CAAATTGAGGGGCAACGTAAGAGTTGAATT 1091719 30 96.7 30 .............................G GGTAATTTCACCTGGTGTGATACCTGGGTA 1091779 30 93.3 30 ............................CA AGCAATATCATCATCATGGACTTCTTTTAA 1091839 30 93.3 30 ............................AA ATTGAACTTTGACGATATCGAGAGCTTTAT 1091899 30 100.0 30 .............................. CTGTAAAGCTTCATACTCAAGTGGACTTAA 1091959 30 96.7 30 .............................G AACCAGGTCTTCCACCGATCACGCAAAAAT 1092019 30 93.3 30 ............................AG CAAGCTACTCCAACTCAATCAACAAAAGAG 1092079 30 96.7 30 ............................A. AAGGATGATTCGGAGTTGCTGGAGTGGGCA 1092139 30 93.3 30 ............................AA CTTAACACACCATTGACCACGCTAGATATT 1092199 30 100.0 30 .............................. GTAACGCCTGCCTGTTAAAACGCTTTCTTC 1092259 30 93.3 30 ............................AC AGGGGAAATGACGAAATTGATAATCTTATG 1092319 30 100.0 30 .............................. TCAGTCCATAGTTAGGGTGGTTTTTACCAC 1092379 30 93.3 30 ............................AA TGGTGGTGCATGGCAGATGATTAAAGTAAG 1092439 30 93.3 30 ............................AA GGGGGTATCTGATTTAATTGTGATTGGAAA 1092499 30 100.0 30 .............................. TCCCGACAAAAGCCTGATCAATGTCAACTT 1092559 30 100.0 30 .............................. TCGCGTATCTAGCCTTAGCCTTATCAGATA 1092619 30 93.3 30 ............................GC CGTGAAAGGGCGACGCTCCAGAGTTCGATT 1092679 30 96.7 30 .............................A TCACGTCGCTAGCGTGCGAGGACGAGGAGC 1092739 30 100.0 30 .............................. ATTACTCTCACACAGCTAATGGCATGTGCT 1092799 30 93.3 30 ............................AA TTGCAGTTCCAGTTGATAAATCCATTGGGA 1092859 30 96.7 30 ............................A. CTGGGAGATCACGCCAATCGAAAGGCTTGT 1092919 30 96.7 30 .............................A AAATATGGTGTGCCAGTCGGTAGGCTTTCC 1092979 30 96.7 30 .............................C CCATTGTGATTGAGTGAGAGCATGGCTTTC 1093039 30 96.7 30 .............................A GTGTTACTGACGTAGACGATGCGAATGCCC 1093099 30 93.3 30 ............................AA CACCAATAGAATCATAAACGATTAGCGCGT 1093159 30 93.3 30 ............................AC TCAAAGAGAATTCTATTTATAGAGGCAAGT 1093219 30 96.7 30 .............................A CCCAGTATTCAAGTACTGGCATGGCAGCTG 1093279 30 96.7 30 .............................A GACAAAACCTGATATTTGATCCAAAGCAAA 1093339 30 93.3 30 ............................GC CACAAAGAGCGAAACGCCCATGCAAGGTGA 1093399 30 93.3 30 ............................AA TAAAAGAACGCGCTCCTGATGTTTTACCAT 1093459 30 96.7 30 .............................G AAAAGATTGAAGTTGAAATCATGGTTAAAG 1093519 30 100.0 30 .............................. TGGCTGTTGATACGGGGCAAGGGGGTAGTA 1093579 30 100.0 30 .............................. TGGGTGAAGTTGCAGAAAATGGTGTGCTCC 1093639 30 93.3 30 ............................AG TCGCATTAGCATTTGTGGCCAATAACATTC 1093699 30 93.3 30 ............................GA TCAAAAAGAAACAACCGCCTGTACGTCCAC 1093759 30 93.3 30 ............................AC ATTAAAGGCTATGGAAAGATCATCTGTCGA 1093819 30 96.7 30 ............................A. TTGTTACTATAGAGATATTGTGTTCAAAAA 1093879 30 96.7 30 ............................A. AATAACTACGGTTATGAAGATTATGAGTTT 1093939 30 96.7 30 .............................G AGTGCGAAGATGATTCAAAGCGATTCATGC 1093999 30 96.7 30 ............................A. TCGGTGCCAATACACCGCCAACCCATTTAC 1094059 30 93.3 30 ............................CA CCCAAAAACCAGTTGCATTACTTGAATACC 1094119 30 96.7 30 ............................A. AGGGCGACTGGATATAGTCATCCTGATGTT 1094179 30 96.7 30 ............................A. TAGCTTTTTAAGTCCATCAATTTTTTCTGG 1094239 30 96.7 30 .............................A AAGAAAAGCGCAGAACTCAATGAATACAGC 1094299 30 100.0 30 .............................. ACAGAACTGGTGAGGGCTGGATTGCTGAAA 1094359 30 96.7 30 ............................G. TGGCAAGTTTTCAAACATATCAATATCAAG 1094419 30 100.0 30 .............................. CGTTAAACAAATAGTACACACCGCTAAACA 1094479 30 100.0 30 .............................. GAGTACAAACATTCCCATCTTCAACGAATA 1094539 30 93.3 30 ............................AC TCGGAAATAAATTCTGAATGTTGTCCGTAT 1094599 30 96.7 30 .............................G TAGCGCCGTGTTTGATAAGAATTGGTTTTC 1094659 30 96.7 30 .............................A AAATATCGGGGTTGATGTTGAGGCCAGCTT 1094719 30 93.3 30 ............................AC GGCGCAAGCGAGAACGTTAAGCGACTTGTC 1094779 30 96.7 30 .............................G AGTACAAGGCGACGTACCCAACCGATGAGG 1094839 30 100.0 30 .............................. GAAAAGCAGCTAAACATGACTGCTTTCATC 1094899 30 93.3 30 ............................CG TGGAATGCGTGACATGCAGGAGGACATCAA 1094959 30 96.7 30 .............................G ATCGTGCGGATGAGGTTGTAACTGGTTCGA 1095019 30 100.0 30 .............................. CCACTGGAAATGATGATCAATGCCGTAACA 1095079 30 96.7 30 .............................G TATAGATAAGACACAACTAACCACATCACA 1095139 30 100.0 30 .............................. TTCGCTACTCACCTGTTGTCGATTCCTTTA 1095199 30 93.3 31 ............................AC GTACCTTCAAATACAGAATACCCGTTTGTCG 1095260 30 96.7 30 ............................A. TTCCAAATAGCACGTTGCCTGAGTTCATCT 1095320 30 96.7 30 .............................A ACACCGCAATCGTATGTTGCAGCAGGTAAA 1095380 30 96.7 30 .............................G AATACAGCACCCCAACAGGTGAAACTATTC 1095440 30 96.7 30 .............................A CATGCGCGACAACACTTCAATTCAGATGAT 1095500 30 96.7 30 ............................A. TAGGTGAGAAGTGGCATGCGGACCATTTGG 1095560 30 96.7 30 ............................A. TACGAGTGCAAATTCTTTCCAAGGGTTAAT 1095620 30 93.3 30 ............................GC AAAAGCTCGCATCAATCGTGATCAAGTAAA 1095680 30 93.3 30 ............................GA AAGGCGGTTTTTTATTGCGTGGAGAAAAGT 1095740 30 100.0 30 .............................. TCAATAATGCAATCGACTGATATGCAATAC 1095800 30 100.0 30 .............................. GTGAACGCGTTTAGAACGCGCCACAGGTTT 1095860 30 96.7 30 .............................C AAACAAGATAGATTCGGACTTGGCGCATTT 1095920 30 96.7 30 ............................A. ATTTGGAGCGAATCGAAGAAAGCGCACGAA 1095980 30 93.3 30 ............................GA ATTTGAATAAAACAGCGTGTCAAAAATGGC 1096040 30 93.3 30 ............................AC TGGGGTGGGCTGTTGCAACTTTTATTTTTC 1096100 30 100.0 30 .............................. CAAGAGCATCGCATCACTGTCGTCATTCTC 1096160 30 93.3 30 ............................AA CATGGGAATGTTGTGTACCACTTTATCAAT 1096220 30 96.7 30 .............................G GTGTTAGACCTGGAACCAGGGATAAAAGCC 1096280 30 96.7 30 .............................G ATTATTAGGAAAAGATATGAGCCATATCAT 1096340 30 93.3 30 ............................AA TAACTGTTACGGACTGGTGGAATCGCTCAA 1096400 30 96.7 30 .............................C ATTAGTTAAAGTAATTTCACCGCTTTAGCG 1096460 30 96.7 30 ............................A. GAGAATACGCATGGCGTTCTTAGGATTACT 1096520 30 96.7 30 ............................A. ACGGATAACACTGATCTACCAGTACAAGAA 1096580 30 93.3 30 ............................AC CTCTTAGAACTTTTGCTACTTGGCTGACGT 1096640 30 93.3 30 ............................CA ATCAACAGTGCCTAGCAATTGCTCTACTGC 1096700 30 96.7 30 ............................C. AGCAATTGCTCTACTGCAATAGATAAAGCA 1096760 30 100.0 30 .............................. GTAAGGGATTTGATAATAAAATTCATTGAT 1096820 30 93.3 30 ............................GA CGACATCACAGATACTTCTGTATCTTTCTC 1096880 30 93.3 30 ............................AG AGACTTCATTTGTGTATTCAATGACTTCTT 1096940 30 96.7 30 ............................G. CTACAAAAATATGTCAATCGTGGTGCTGTT 1097000 30 100.0 30 .............................. AAGGCTGCCCCAGTTGATGGCTCTCTATGT 1097060 30 96.7 30 .............................A CGGTTGGTGCTGTCTCGAAAGTTCTTGCGC 1097120 30 96.7 30 .............................G AGTATTGCGACAACGATGGAAAAATGTCAC 1097180 30 96.7 31 .............................G ACAGGGAATACAAGGGTGATGATTTTGAAAT 1097241 30 96.7 30 ............................A. AGACCAGACACAGACACATCACTATTTACA 1097301 30 96.7 30 .............................G CTAACAATCAAATTGTCTATAAAACATCAT 1097361 30 93.3 30 ............................AA TAGTTCTCTAATTTCTTGTTGTGAATAATA 1097421 30 96.7 30 ............................C. GTGTTGTACATCGTTGCGAGAAATATTAAA 1097481 30 96.7 30 .............................C ATTAACGGCCAAGCGTGGACACGAGAGCAG 1097541 30 96.7 30 .............................C CTCCGCCACTTGGATGCGCGACATTTTATT 1097601 30 93.3 30 ............................AG TGAGAGTTTCTTTTCTTGATCTTGTTCAGT 1097661 30 96.7 30 ............................A. AAAAGCCCCGATTAATTGGAAAGGGGGCGA 1097721 30 100.0 30 .............................. ATCAAGGACGCCTTAAGAAGTATTGCTCAT 1097781 30 100.0 30 .............................. TGCTAGCTACACCCTTATTGATTAGATCAA 1097841 30 96.7 30 ............................A. GATGTATACAATGTTACGCGCATCTGAGAT 1097901 30 100.0 30 .............................. AACGATGTACAATCGCCTGATTTTGAGAAA 1097961 30 96.7 30 ............................A. CGAGCAATTGAACCTAGCATTTCCTCTGTA 1098021 30 93.3 30 ............................AA TAGAAATTGGATTCACTGCATCAACATTGG 1098081 30 96.7 30 ............................A. GGTGTGGAAGCGTTCTGAATCCATGCGAAT 1098141 30 93.3 30 ............................CA ATCAGAGCGAGCAACAGTAATTACTAGTGA 1098201 30 100.0 30 .............................. TTAAGTATTCACGTTCAGCAATAGTTAAAT 1098261 30 96.7 30 ............................G. GACGGAGAAGGGTGATGAAGAAATTAAACG 1098321 30 93.3 30 ............................AA AATGCGAATTAACTACGGCAAGAAGTTCAT 1098381 30 93.3 30 ............................AC CCGATAATGGCCGACCATTGTCGTCAAAGA 1098441 30 93.3 30 ............................AA TTTGTCAGTGTCTGCGGCGACTCATCAATA 1098501 30 93.3 30 ............................AA AATACTCACTCACTACTGCTGACAACGTAT 1098561 30 96.7 30 .............................C GAAAGTCATGGGATCAGATTGGAAAGATGC 1098621 30 96.7 30 ............................A. CGTCATAAGCATTTAATCGAATACCCTCAA 1098681 30 96.7 30 ............................A. CTAGTGTTATTGGGTGGGTAAAACGATTTA 1098741 30 96.7 30 .............................G TTTGACCTGAATCCAAAACCAAATTAAAAG 1098801 30 96.7 30 ............................G. ACAGGCTAATGTTAAGCCATGTCGGGTGGG 1098861 30 96.7 30 ............................A. TCGGGGGTGATGTGAGTAAGCAAAACGATA 1098921 30 100.0 30 .............................. CACCCCGACTTTGTAATTTCCTCCGACATT 1098981 30 96.7 30 .............................G ATTCAACGGGTGGCAAAAATAAAGCTGAAT 1099041 30 100.0 30 .............................. ACAGCGCAGGGATGTGCTGCGGGTATAGTA 1099101 30 93.3 30 ............................AG CAATTCATGGTATGGGTTTTATTAGCGAAT 1099161 30 93.3 30 .............C..............A. AAAGCAATATTGACCAATAAAAGTAAGCGT 1099221 30 96.7 0 .............................A | ========== ====== ====== ====== ============================== =============================== ================== 163 30 96.3 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGTAAATGGCTAGAACGATTCATTGATTATGTTCATATCATTCAACCGAGAGAAGTACCTCAAGCTAAAGTTACTGGTCATGCACACTATTATCGAGTCAATCCAAAGATGGGGATTGAGGAACGTATAGTTCATCAAGCGCAACGTCGAAAAATTTCTTTGGATGAAGCTAAGCAACATTTTAAACAATATATTGAACAACCTATCATTGAGCCTTATGTGAGTTTAAAAAGTCTGAGTGCTAAACGAGAACAAAATATAGATCGACCATATCGTTTATATATTGGTAAATCTCTTGTTGATGAGGCAAAAGATGGAGAGTTTGGAACGTATGGACTAAGTCGAATGGCAACAGTTCCAGAATTTTGACCCAATATTTTTTTACTCTTTAACAGCTCAATAAAATCAATAAGTTACACCAAGTCATTTTTTGGTTGGGTAAATTGCTAAAAACCATCATAAATACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : ACATGTGATTTATTCATATGAGCCATTTAGAAATGTAACGGTCTTGATTGGCATTTGTTCTGTGTGTTCATTACGGAATTTATTTTAAGAATTAATAAGTGACTTATAATTCTTGTTCCAAAATTATCGTGTTATATGTCATTTAAAATACATAACATCAAGAAATATGATTCTTACTACATTCTAGATCTTTAATTTTTAAATAAGAAAATATACCCTGAAACTAACGTTTTTTTAGTGAAATTTTCATGCGTGGTTTATACCTCATCACCAATGATGATCCCATTCAGCTTCTTTTAGAAAAGTTAGAGGCTGCACTAGCTACTGGTCATATAGCTATTTTGCAATATCGTCGAAAAAAAATAGAAAAAATAAATCAACCATCTGAAGTGGAGTTGATCAAAGTCCTGAGTGAAAAATATCAAGTCCCTTTTGTCATTAATGATGATTTGGCGTTAGCAGAACAATTTGGTTTAGGTGTGCATCTAGGGCAGTCCGAT # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.24, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [83.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //