Array 1 4271-3583 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHAMN010000033.1 Vibrio metschnikovii strain MNW Scaffold33, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 4270 28 100.0 32 ............................ CAACGCCTTCATTAATTGAACCGAGCGAATCA 4210 28 100.0 32 ............................ ATTACGAGCATGTTTGGGCGACTGAGCAAAGC 4150 28 100.0 32 ............................ GATCACGATTAAACGCTGGCTAAATGGCTCTA 4090 28 100.0 32 ............................ CCGCTGCGCTTGCTTGTCGTTTGGATGAAAGA 4030 28 100.0 32 ............................ GTTCAAACCCTCGCGCAATTTCTTTCGGGCTG 3970 28 100.0 32 ............................ GTACCCCGTTTGATTTTGCCGAGCGTTCGCCG 3910 28 100.0 32 ............................ AGCTCAAAGCCGCCTCGCGCTGGGCTGAATTC 3850 28 100.0 32 ............................ GAGACCAAAGCCAAGAGCAGCTAGGGCAATAA 3790 28 100.0 32 ............................ GCCTTGGGGTCGTGGGCTTTCAACGTCAAAAT 3730 28 100.0 32 ............................ CTCACCAATGAGCAGGTACTCAGCGATGCCAT 3670 28 100.0 32 ............................ ATGTTATTTCCCCCGCATCGCCAGATATAAAC 3610 28 92.9 0 .............C..........A... | ========== ====== ====== ====== ============================ ================================ ================== 12 28 99.4 32 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : GGCGAAAATGTAGGTGTTTCATTTTATGCTTTCTTCGCCAATAAGAATGATGATCCTGAATTACTAATGGAAGCAGCCACTTGGTGGATTCAGAAGCATCAACTAGATCATTTTGAAAAAGCTAATAAAATCATTGAAATGGTTAGGCTAGGTAAGTAAGCGTGTGCTTTGAGTTCAAGCCATAACAAACGCTTCAAGAGGGACTTCCAACGCGCAGCATTTTTATTATGCGTTGATTTCAGTGGTTTCAGTGTTATGCGGAAACTTGGTAGTAGCGTTGTCAGCCCCTTAAGCGGGCGTTAACTGGCAATGAAATTACCCATCTTTTTTCGTTGAATTTTAAGTTATTGATTTATATTAATAATAAATCGAGTGAAAAATAAAAGGTTATTTTGAGAAATTTGATGTAATTACCATTATTAACAATAGGTTACTGCTAAAGTTTCAT # Right flank : TGGGTAATTTTGGCATTTGGGATCGGCCAGTTAACAAAGCGTTCAAGAGGGATTCGCAACGCGTAGCATTTTCGTTATGCGTTGATTTTATTGGTTTTTAGTGTAATGCGGTGAGTTGGTAGTTGCGTTACTCACCCCTTAACGCGGCGTTAGGTATTTGGAGGCATCATGAGAGCTATCTTTTTGATTATTTGCTCGGTTTTATTGAATGGCTGCTTGGGTATGCCTGAATCAGTAAAACCAGTGTCGGATTTTGAACTGAACAATTATTTAGGTAAATGGTACGAGATTGCTCGACTCGATCACTCCTTTGAAAGAGGTTTAAGTCAGGTTACAGCGGAATACAGCATTCGAAATGATGGTGGTGTTTCGGTTCTTAATCGTGGTTATTCTGAAGATAAAGGTGAGTGGAAGGAAGCTGAAGGTAAAGCTTACTTTGTAAATAGTCCAACAGACGGCTATCTAAAAGTTTCATTTTTTGGTCCATTTTATGGTTCTTA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 1663-1455 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHAMN010000037.1 Vibrio metschnikovii strain MNW Scaffold37, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1662 28 100.0 32 ............................ GTATAGGGTCCAGCCACGTCATAAACGCTTTT 1602 28 100.0 32 ............................ GCAAAAGGAATCGTATAACGGCCTTTTTCGGT 1542 28 100.0 32 ............................ GCGCTGCAAAAAAAGCGCATTAGCCGGCGCGC 1482 28 96.4 0 ........................A... | ========== ====== ====== ====== ============================ ================================ ================== 4 28 99.1 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : TTTCATGGCTCAGGGCTCGGAAAAGTTAGTCTAATTCGCGCACTGAAGTATTTGTGGGAAGTGAATCATCACATGAGGGTATACGCAATTGTTGTGGACTGTCTGACAGATTCCGCTCAAGCGTTCTATACGAAGTTCGGCTTTGAAGTATTGTGCGAACATAATGGCCGTATTCGTATGTTCTTACCAATGAAAACGGTAGAGCAACTTTTTAATTAATAGGCTACGAATATAACAAGGCGTTCAAGAGGGATTCGCAACGCGTAGCATTTTCGTTATGCGTTGATTTTATTGGTTTTTAGTGTAATGCGGAAGGTTGATAGTTGCGTTGCTCACCCCTTAACGCGGCGTTAACTGGCAATGAAATTACCCATCTTTTTTCGTTGAATTTTAAGTTATTGATTTATATTAATAATAAATCGAGTTAAAAATAAAAGATTATTTTGAGAAATTTGATGTAATTACTTTTATTAACAATAGGTTACTGATACAGTTTCATA # Right flank : TATTGGTACTTTTGGCATTTGGGATCGGCCAGTTAACAAAGCGTTTAAGAGGGATTCGCAACGCGCGGCATTTTCGTTATGCATTGATTTTATTAGTTTTTAGTGCAATGCGGTAAGTTAGTCGTTGCGTTGCTCACCCCTTAACGCGGCGTTAACCCTCTCACACGCACGTGTGAAAACATCACCTTTCGTAACGGAACGTTACAGGGGTTTTACCTTCGATGTGCATCGCACATACGTGTGTGGGTTATTTTGTTCCGAATAATCTCAGATAGTATCTTGATTATTTATGAACTTATGGGCATAATTCCGCCGTGGCTTAGTTCAAGTAGTTACGAGTAATCTACAGGTAGTGACAGAGATAATATTCTTTATGTATTAAAGAATCTTCCTAACACTTAGCAAAAAATCATTACTCACAACAAACCAACTAAGGGGGTCTTATGACTCTACAGAAAAATCCGTACCACAGTCCAATGCTCACCGATAGAGATCTTTTG # Questionable array : NO Score: 5.81 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 275-483 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHAMN010000046.1 Vibrio metschnikovii strain MNW Scaffold46, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 275 28 100.0 32 ............................ AACTCGATTAAATGACGCTAAGATATTAGAGT 335 28 96.4 32 C........................... ACATATAATGAAAATCCGCGACTTGCGGCAGC 395 28 100.0 32 ............................ ATTCTGATTTAGCTTGCAGGTACAACGCCTCA 455 28 100.0 0 ............................ | A [478] ========== ====== ====== ====== ============================ ================================ ================== 4 28 99.1 32 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : CTGAAATATAACAAACAATTCAAGCAGACCCTCAACGCGTGGCATTTTCGTTTTGCGTTGAGTTTAGTGATTACGGTGTTGTGCAGGAAGTTGGTAGTAGCGTTTCGGGCTACTTAATTGGGCGTTAACTGGCAATAAAATTACCCATCTTTTTTCGTTGAATTTTAAGTCATTGATTTATATTAATAATAAATCGAGTGAAAAATAAAAGGTTATTTTGAGAAATTTGATGTAATTACTTTTATTAACAATAAGTTACTGATAGAGTTTCATTG # Right flank : ATTGGTAATTTTGGCATTTGGGATCGGCCAGTTAACAAAGCGTTAAAGAGGGATTCGCAACGCGTAGCATTTTCGTTATGCTTTGATTTTATTAGTTTTCAGTGCAATGCGGTGAGTTGGCAGTTGCGTTGCTCACCCCTTAACGCGGCGTTATAAGCACAAGGAGATATCATGCAAATCGAATGTCCATCCTGTAAAACAGATAATCATATTGATTATTCTGAAAATATTATTTGTGTCAATTGTAAGAAATCGTTTACTGGTCATGTATTTCAAAAGATTAAAAAGCCATTGGTTTCGTCAACAGCTGCTTTGTTCATTGGCATTTATGGTACATATAAAATAGACAACCATTTTTTTGATGAGCAAAGGCTTCCGATTCCGATTGAATATGAATTAATTGATAGTTGTGTTAATTCATCAAATGGAGTGTTGCGAGATTCAAAATATATCTTAAAGAAAAAAATATGCTCATGTGCACTTGAACAGACATTACTAGA # Questionable array : NO Score: 5.81 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.70,-7.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 455860-455592 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHAMN010000001.1 Vibrio metschnikovii strain MNW Scaffold1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 455859 28 100.0 32 ............................ GTCAGTTTGTGAAACAGCTTGCGGAGGCTATA 455799 28 100.0 32 ............................ ATCTAATTTACGCCCATGCTTTTCTCTCAGCG 455739 28 100.0 32 ............................ TCCGCGCCTATCGTGGTTTTTTGTCCGATCAC 455679 28 100.0 32 ............................ GCCAAAAAATAAAAGAAACGTGGGGCGGCTGT 455619 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 5 28 100.0 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : GGATGTGACTTACGTAAGCTTTGTGCGCAAGCAGGTGAAATCGCCCGAGCGAATAGAGCGGGATATGCAGCAAAAAGCGGCATTATGGGCAGAAAAATCTGCTAAACCGCTGGAGGAATGCTTGGCCGCTTTGCAACAAAGCAAGCCGACAGCATTGTGCCGTTTGCCGTTTATTTACCTACATAGTCAGCAAACTAAGCAGCGATCACCCGACAAAAACAGCAAGTTCCCGTTGTTTATTGAAATGCAGCAACAAAGCGCTTTACAAGATGGTCATTTCGATTGTTATGGACTGAGTACTAAAGGGAATGGGCTTCCTACGTTAGCCACCGTACCGCATTTCTAAAATGAACGAAAAAGGGTATTTTTACCCTTTATTTTTGCTCTTTAAAAATAAGTTTTAAATACAATGGGTTACAATGGACGGTTTTTGATAAGGTAAAAATGCGATTTTTATCCTAACCAACTGTTGTAACTTATTTTTATTGATTTATTCTATA # Right flank : CGCCGGATTCGATGGAATCAAACTCCCGCCAGTCATCCCCGCGAAGGCGGGGATCCATTCTGCAACAGATGCCAAGTGCTTAAGTGAGCGATCAATGATCACCGTTTACTGATACTGCGCATAGATTCCCGCCTACGCGGGAATGACGGTTTGGTTGTGGTTTTGGGAGCTGAACTCCATAGATCCCCGTCATGTTTTGCCTGCTACTGCTGTGAGGCAGGGAAATGAAGGCGTAGCGATCATCGAAAACTGATCCACTAAATACACTTAGTCAGCATAGATTCCCACCTTGAGGGCAATGATGCTTGACGCTTTGAATACTCGATTGTTCACCTTGATTACAAGAAAGCGTGAGTTGTTTAACAATATGTGCGCCTAATTCCTTAGACACTACGTTGTATGATTGATGTGAGTGGTGGAACACATGAGCTCCCTAACGTTACCTTGCCAGCGAGAGATTGATCTCTCATCAGAGTTAAACGTCGTATTACAAGACAATG # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [38.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 53204-50207 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHAMN010000008.1 Vibrio metschnikovii strain MNW Scaffold8, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 53203 32 100.0 35 ................................ TGATAACGGTTCCAATACCACATCAAACTTACCAT 53136 32 100.0 33 ................................ GCGTTTTGCTTCGATTGCTATCATTTGCATTTG 53071 32 100.0 35 ................................ GTCGCCATCACGGATTCATAATCACAATCAAGCAG 53004 32 100.0 35 ................................ AATGAATTACCTTACGAGTACAAACCTGTTGCTCA 52937 32 100.0 33 ................................ CGCATCACCTTTTGCTTTATCCAGCTCAGCAAG 52872 32 100.0 35 ................................ TGAACCAGCAGTTTTTCGCGCTAAACACACTTTCG 52805 32 100.0 33 ................................ TAAAGAACTGAGTAATTATAATTGCGTTAAAAG 52740 32 100.0 34 ................................ AGGTTGATGTTGATAAGCAAAAATCACTGTCAGT 52674 32 100.0 34 ................................ TACACTGGTAAGCTATCAATGGATGAATGGTTAG 52608 32 100.0 34 ................................ TAATTGCTCATCACTCAATCCGTAAGTGTTAAAG 52542 32 100.0 34 ................................ TAAAGCTTCGATCTCGGCTTTGTCACTAGTTTCG 52476 32 100.0 34 ................................ ATGCATGTTCTTGCCTTTTAAATGGTTTTGATAA 52410 32 100.0 34 ................................ CTTTACACGATCGGCGATCTCTTTGGGTGAGTCA 52344 32 100.0 34 ................................ TGGAATGAGCTTGATGCCCACAGGAACTTAATAT 52278 32 100.0 34 ................................ GTTCTTACACTCAAGAAATTGGCGCAGCAAATAA 52212 32 100.0 34 ................................ ATCGCTGCGGTGGTTGCCATCGCTCGTCCTGTTT 52146 32 100.0 33 ................................ GAATGCGATCGACCAAACTCCGTGTTGCCACTC 52081 32 100.0 33 ................................ TGAGAAAGGGGTTTTTAGGGTTATATATAAAAC 52016 32 100.0 33 ................................ TTGTAATCGACCTGTTGGTATCCTTGAACTAGA 51951 32 96.9 33 ...............................A TGTACAATTTGAAAACCTTAATATTCTAGAAGT 51886 32 100.0 33 ................................ TAACAATCCACTATCTATCTCAGCAACGGATTT 51821 32 100.0 35 ................................ AATTCATTAACTATCACGCCTTTATCGCTAGATGA 51754 32 100.0 34 ................................ ATTTTATATTACCTCCGTATTCGATGAGGCAATT 51688 32 100.0 34 ................................ ACTCTAGCTGGTCTTCTTGGCGCTCGGCGCAGGT 51622 32 100.0 34 ................................ GTGCCAACTTGGATAACGCCCGTATTCGTGAACC 51556 32 100.0 34 ................................ CTTTACACGATCGGCGATCTCTTTGGGTGAGTCA 51490 32 100.0 34 ................................ AAAAAATGTCCGAAGTAAGCAGGGAGTGGAAAGA 51424 32 100.0 33 ................................ ATATGCAAACGGTGAGCTGCTTGATGGCGTAAT 51359 32 100.0 35 ................................ CTGAGCGATTTTTTCCAGATACTCAGCGGTAACAC 51292 32 100.0 34 ................................ AGCGCTGCATAATTGACACCATCAATCACGCTAT 51226 32 100.0 33 ................................ ATTCCAAAGGTAATCAAATCTGCCGCCAGACGT 51161 32 100.0 33 ................................ CCTTGTACGCAATGATACAAGACTCAGAGCCCG 51096 32 100.0 36 ................................ GTTAAGAATATCATCGTTACTAAACCCACGTCTGCG 51028 32 100.0 33 ................................ CTGAGCGAGCTGACTACATGGCTGGCTATATGC 50963 32 100.0 33 ................................ AAGTTCTTAGTTGTATCGGGCGGCGCTTACGCT 50898 32 100.0 34 ................................ CGGTTCTGGATGTGTCGTCGGCTTTGAGCTTCTG 50832 32 100.0 34 ................................ AACTATCCCCATCACTCGTAAGCCTTTTTTATGT 50766 32 100.0 34 ................................ GCAAACGGATAAATGCAAGGAAAATAGGAAAAAT 50700 32 100.0 35 ................................ CAAAAGGTCGGCGAAGGCTACGGAGAGACATTAAC 50633 32 100.0 34 ................................ AGATGAGAGAAGATAAACCAATCCATTACATTAT 50567 32 100.0 35 ................................ AGACAAGCAGTATATCAATACCTTCTGGAGTGGTT 50500 32 100.0 33 ................................ TGCCAGTTGAATTTTTTGCCAGCTAACAAAGTG 50435 32 100.0 34 ................................ TTTGCATAAACAATACGGCGGCAGGGCAAGGCGC 50369 32 100.0 34 ................................ ACAGCAAAGTGATGAGCACAGAGTGATTGACCTT 50303 32 100.0 33 ................................ CCGAGGACTTTGTAAAACAAGATTCACAGAGGT 50238 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 46 32 99.9 34 GTCGCGTCTCCCGCAGGCGCGTGGATTGAAAC # Left flank : ATTTGTGATCAAAAAATAAGGAGAGTGCGCCATGATGGTATTGGTCACCTACGATGTATCTTTTGTCAGTGATGATGGGCAAAAACGCCTCAGGCAATTAGCAAAAGTCTGCTTAGACTATGGTATGAGAGTGCAATATTCAGTGTTTGAATGTGAAATAGACTCAACACAATGGTTAGAATTTAAAGATAAACTTTTATCTATTTATGATCCTGAAGTCGACAGTTTGCGTTTTTATAAGCTCGGTAAAAACTGGCAAAACAAAGTAGAGCACCATGGTGCGAAAGAAGCGATAGATATATTCAGAGATACCCTGATTTTATAATCGCTAGCCTTGAGTTCTCAGTAAAACACTGGGGATCTAGCGATTACATAAGTTCTTTAAAAATAGAGCAAATATTTGTTTTTATAGATTCACACAAAACAGTTTTCTTCTACCGCGTAAAGTTAGCGGCAAACCATAATATATGCTAGTTTACACGTGCCTTTCACAATAGGCA # Right flank : ACCATTACTGATAACTCGTATCTTTCTGACAAAAGTCCCACCTCACAAGAACATAGTGAAACTCGACTCGCTTAGGTCGACAGTTTGCTGTTACGGCAGCAAATTACCGGGCTTCACTTAACGCTCAACCATACTTTCTTTAAGCTGTTGCCTTGTATCCGGTTTTAGATAACTCATCATAATAAAACTGAGTAATCCACACAGTAGGGTCGGGACGATGGGATGGATGCCCGCTAAATCAGGTTTTAACCACATTAAACTCGTGTAGGTGGAAAGCCCAACGATCATTGAACTCAATGCGCCTGTCGATGAAGACTTTTTCCAATATAAACCGAGCACCAAAGGCCAGAGAAATACCGCTTGTAAGCCTCCGAGTGCCATTAAGTTAAGCCAGACAATCATCTCCGGTGGATTGGTTGCAGCAAAAAAAACTAACAAAGCAAAAATCATCGTCACCCACAAAGATAAGCGAGTCAGCTTACTTTCTGCCTGCGGCTCAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGTCTCCCGCAGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [61.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.5 Confidence: HIGH] # Array family : NA //