Array 1 30611-32739 **** Predicted by CRISPRDetect 2.4 *** >NZ_ORZM01000200.1 Xanthomonas fragariae strain PD 3170 isolate PD 3170, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 30611 28 100.0 32 ............................ AGACGGTACAACTGCATACGCTAGAGGTATAG 30671 28 100.0 33 ............................ GTCATCGTGACAACCGAATACCGTGGTGTCTTC 30732 28 100.0 32 ............................ TTACGGTCATGTCCTGGATATGGTGTCCAGGA 30792 28 100.0 32 ............................ TTTCAGATCCCTCGCCTGGGTGGCCTACTCGT 30852 28 100.0 32 ............................ GTCCATGCGGCCGGCAGCCAACAGGCTGCGAA 30912 28 100.0 32 ............................ TATGTCGCTGAGGGGTGATCCATACCTAACCC 30972 28 100.0 32 ............................ CTGGCTGCAACCGCTACTCCGTAATAACTAGG 31032 28 100.0 32 ............................ ACCAGGTCCCGGCCCTTCTGGGAGTTCACTGC 31092 28 100.0 32 ............................ AATGAGCAATAACTTTTGCGCTAGTGTTCATC 31152 28 100.0 32 ............................ ACATTATCTTTTCCGCGAATCAAAAGCTTAAT 31212 28 100.0 32 ............................ TTCCGGGGCAATCCCTTTACGCCTTCTTGGCC 31272 28 100.0 32 ............................ ACCAAACGAACTGGTCCAGGCTAGGATCCGTT 31332 28 100.0 32 ............................ TTCTGGGACCACACAACCTCGCCTGCGTGCAC 31392 28 100.0 32 ............................ GTTCAGGGCAGGCGAAAGGTCTCAGCGCTGCA 31452 28 100.0 32 ............................ GCATCGACCCAATGGCCGCCCTTGCCAGGCTC 31512 28 100.0 32 ............................ TGCAGATGCGCGCGACGAATATCGGACGTGTC 31572 28 100.0 32 ............................ AAACATGCGGGGATCAGCACGGCCATCGGTTC 31632 28 100.0 32 ............................ CGTAGCCGGGAACTCAGCCAACTGTGCTTGCA 31692 28 100.0 32 ............................ GATTTCACTGATTGATCTGGACACTGTGCAGC 31752 28 100.0 32 ............................ TCGAAGTAGGCATAAAGCACGTTGGGCAGCCG 31812 28 100.0 32 ............................ CAGACAAGCCAGACGCCGACCCACTGATAGTC 31872 28 100.0 32 ............................ CGTCGTTTCGCGTCGTCCACCGCAGCCAAGGT 31932 28 100.0 32 ............................ ACCAACGACGGGTGTCGCGCGCACCTGGGTAG 31992 28 100.0 32 ............................ ACCTACGAGCCCCAGCCGTATGCAGAGGTTTC 32052 28 100.0 32 ............................ CATTAGGCTGCACAGTGTCCAGATCAATCAGT 32112 28 100.0 32 ............................ AGCCGCACCCTTGCAGACTGTACTCTCTGCAT 32172 28 100.0 32 ............................ TCCACGTCCTCTTGAACAACATGTTCAGGGAG 32232 28 100.0 32 ............................ TGCAGCAGGGGGAGGAACTTCCGTATCAAGAC 32292 28 100.0 32 ............................ TGTAGGAGCAGACGGGGACAATACGCAAGCAG 32352 28 100.0 32 ............................ TTTGCGCCACACCGAAACCGAATTCCGCGACA 32412 28 100.0 32 ............................ TAAGCAGCGCGTTAAGAATACATTCGTGACCT 32472 28 100.0 32 ............................ TAGATGCCCTGATTGCAGAAGTCAGGACCTCT 32532 28 100.0 32 ............................ TCTATGGGGAAATCATTTTCGAAAAGTACATC 32592 28 100.0 32 ............................ TCCCAGGGCAGTCGGTGTCGCACCTTGCTTCG 32652 28 100.0 32 ............................ TTAAACCAAAACTCATGCCAGTCGTAGCGACT 32712 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 36 28 100.0 32 GTTCACTGCCGCGTAGGCAGCTCAGAAA # Left flank : TTGCAGATGTTGATGGCGAGACCCTGGCTGCACGGGATGCTCGATCACCTGGCGGTATCGGCCATTCTCGCTGCCCCTGCCGACACCCAACATCGGCACGTCACCAGGGTGCAGGCCAAGAGCAGTCCCTCGCGCCTGCGCCGTCGTGCCATGCGCCGTCATGGGATCGATGCAGAGACAGCCGCCCAACGCATCCCGGATGCGGCAGCCGAACAGCTGCCACTGCCGTTCGTCGTACTGGGCAGCCGCAGCACGGGACAGGCGTCATTCCCGCTGTTCATCCGTCACGGCCCCCTGCTATCGGAGCCGACGAACGGCAGCTTCAACAGCTATGGCCTGAGCCAGGAAGCGACCGTGCCCTGGTTTTGACCCTTTTTCCCGGACAGAACAAAGGCTGCTTTAGAATCAACCACTTGGCAGGCACCTTGTTTCAAAGGGTGCCTGCCCTGTTTTGTCGGTATTTCTTTTATTTATCAATGGATTGATGAAGATCTGATCTT # Right flank : AATTCAAGGATGGCCATACGGGTTGGATTGACGTTTGATACGCCCAGGGTTCCGTAGACCCTCAAGACCCTCGTTGCGCGTAGCGCCGTTCAAACTCTACAGGGGACAGGTCGCCAGTTGAACCGTGGCGGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCGTAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCGTAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [65.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //