Array 1 2639167-2636887 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP036264.1 Stieleria maiorica strain Mal15 chromosome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 2639166 36 100.0 36 .................................... AAAACTACATGAGTTCCTGCGAGTCCCCACCTTTGG 2639094 36 100.0 38 .................................... GAAGATCACTTCGACGATCGCGTCACGCCAGCCGCTGA 2639020 36 100.0 38 .................................... GTGCAGGCCCAAGGTGCTGAAAGCTTCGCGGTCGAATT 2638946 36 100.0 36 .................................... TTTCCCATTGGCCACTCGGGGTACTGGTCGCCGTCA 2638874 36 100.0 37 .................................... TCGGCGGGAGGGCGGCGCGGCATTGTTCGCCGATCCA 2638801 36 100.0 37 .................................... GCATGAATGCAGCAGAGTCAAAGGTTGGCAAGCACGT 2638728 36 100.0 37 .................................... CTGACGCCGGACGCACGGGATAGGGCGGCCTGTGTCA 2638655 36 100.0 38 .................................... CTGCACAACGCCGCCAACCCTTGGCCGTACAAGGTGAT 2638581 36 100.0 37 .................................... AAGGTGAACGGAAACAGGGCAGGCGGTTACCTACCCG 2638508 36 100.0 36 .................................... GCCCGCACCAAGCAGCTGCCCGGTGTGGAACTGCAA 2638436 36 100.0 35 .................................... CGAGTCCCGTTGTAGCGGAAACAGCCCACAGCGGT 2638365 36 100.0 37 .................................... TGAGGATTGCGAATAATCGCAGGTGGTCGAATTGGTA 2638292 36 100.0 36 .................................... ATTCGGGAGGTGATGCAATGGCAAACGCGATAATGA 2638220 36 100.0 36 .................................... GAAATCAACGAAATGCGGCAGGAAATCTTGCGAGAG 2638148 36 100.0 35 .................................... TCGTCAGTGCCGCCTCCAGGGCCGCGATCTGGCCA 2638077 36 100.0 35 .................................... TCTTGGTGGCTTTCTTGCGGGCGGCTTTCTTGGGC 2638006 36 100.0 36 .................................... CAACTACGGGTAGACAAGTCGGACAGCGACCCCGAT 2637934 36 100.0 37 .................................... GAGAACTCTATCACAGGTTGGGCACGGTTCACGTTCG 2637861 36 100.0 35 .................................... CTGTTCTCGATCTCCACACCTTCCCCTTACCCAAT 2637790 36 100.0 36 .................................... CCGACGTAAAGGTCTGGGATCCGAAGCCGCGGACAA 2637718 36 100.0 38 .................................... CTCATCATATCTCGTAGGCGACACGACGTCACTCGCTG 2637644 36 100.0 37 .................................... CCTGCTGCACCGGCGTCGCCCAGCGGCAGTTCCCCGG 2637571 36 100.0 37 .................................... GTCGCCATGCTCGACGAAAAGTCATGCTCCGTCGGTG 2637498 36 100.0 37 .................................... AAGAATTCTCCGCGATCGTCGATTTCACATAGCCACG 2637425 36 100.0 36 .................................... GCGCCCTCTCGGTTCTACGCTTTCCCACTATCACCA 2637353 36 100.0 36 .................................... GCGTTGGTGGATGGCGCAACGGTCGTCGACGAAGGC 2637281 36 100.0 36 .................................... TTCCGCGTTTCTGCGGATTCGCCAGAAACTCCGCCA 2637209 36 100.0 36 .................................... CAATTCGTCCGCCAACACTTCGGCACGCTCGCGCAT 2637137 36 97.2 35 ......T............................. AAACAGACCTTCGGCGCCATTGGGCGACCAGAAAA 2637066 36 100.0 36 .................................... CGATGGCTGCGAGCCGGTGTCTTCACCGCCGTCCTC 2636994 36 100.0 36 .................................... GTCAGTTCGTCGGTCAGCCGTTCAAACGGGGTTTTG 2636922 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ====================================== ================== 32 36 99.9 36 CTTTCCGCGCTCAATTGAGCGCGGCCTCATTGAAGC # Left flank : TTGATGGAACCGTTCCGCCCGCTGATTGCGGAGTCGGCGGTGTTATCGGCGATCAACAATCGGATGGTCACGCCAGAGCATTTCCTTGTGGCGGGCCAATCGGTTGTGCTGACCGGTACCGGCCGAAAGCATTTCTTGATGGCCTACGAGAAGCGAATGGATGCCACGGTGACTCACCCATTGTTTGGATATCGGGTAAGCTACCGTCGGCTACTGGAGATTCAAACTCGGTTGCTCGCCCGCCTGCTCAGCGGCGAGATCGACGACTATCCAGTCTTCGTGACGCGATAGTTGGATCCCTCAGGCTCGGAATCGTGGCAAGACGCGGGTGCGAGCGGTTCGGCGGTGACGAATCACCGGCAACCTCTCGCAGTCCGGCAAATCACGGTTTCAAACGGCCCCCACGATGTCATTTTCCCACGATCGAACCCCATCATGGCACCAACCGCTCGAAACGCGCCATCAAAATCCGTTAAAATGCCGAGGCCGCCGGCCCGGGC # Right flank : TCAAGTACATCTGGCGGGCCGCGGAATGTGTCAACGACATTGAGACAACTTTTGGATACTTGTTAGCAGGGCAGCCCAGCGTACTCGGGGGCCAGCCCCCGAACCCCCGGGATTTTTTTAGGCATGGCTCGGGTGTTCAATGATGTTTCTTGTGGTATCGTCGACTCGTCCGGTGAAACGGAAGATGGCTCTGCGGGGACGCAACCGTCCAAGGGATAGCCGGATCGAGGGTGCGTCAATGACGTCTCTTATGGAGCTCCGGGGCAATTCGCTTCAGGGGTTCCGATTTTTCTTTCTCTTTCCCGTTTTGGAGCGTTGATCCAGACGGCCTTGGGAAGACTCGCAGGAGTTGGGACGCCGCCCACGAATCGCTCAGGATTCTTTTGCCACGCCTCTCGAAGCGTTTCCTGTCGCTGTGCAAGGATTTCTTCGGCTTGTCCGTAGTGTAACGATGATGGTGTGAGTAGGCCGATGCCGCTGTGGTAATGTTCGTCGTTGTA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTCCGCGCTCAATTGAGCGCGGCCTCATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.70,-13.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,0.78 Confidence: LOW] # Array family : NA //